TomoSeq data search

Data search

Results for MligTC455_16273

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16273

179

3.72

Mlig455_059027

Neo: -

Age: logFC(26M/2M)=0.682

TRPM1

Mlig455_059027 {REF} {Length: 3721} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=91.5]; Ankyrin repeats (many copies) [PF13637.8, score=65.4]; Ankyrin repeats (many copies) [PF13857.8, score=60.1]; Ankyrin repeat [PF13606.8, score=58.7]; Ion transport protein [PF00520.33, score=50.9]; Ankyrin repeat [PF00023.32, score=37.6]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=124, Expect=8e-28]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=123, Expect=1e-27]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=125, Expect=2e-28]} {Dmel: FBgn0005614, trpl, transient receptor potential-like, [Score=71.2, Expect=5e-12]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=94.7, Expect=3e-19]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=199, Expect=4e-52]} {RNA1509_2368} {RNA1310_977} {RNA815_2896}

Cumulative graph for MligTC455_16273

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.625	2.573	0.99970	1.00000
RegionR2	1.003	2.573	0.39574	0.78998
RegionR3	1.39	2.573	0.20189	0.74178
RegionR4	1.758	2.573	0.14272	0.38704
RegionR5	0.495	2.573	0.58848	0.94663
RegionR6	1.591	2.573	0.14245	0.67639
RegionR7	1.531	2.573	0.24776	0.87328
RegionR8	-4.143	2.573	0.99954	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.985	2.573	0.99994	1.00000
RegenerationR2	1.165	2.573	0.06440	0.41591
RegenerationR3	-0.003	2.573	0.98917	1.00000
RegenerationR4	0.596	2.573	0.43211	0.83181
RegenerationR5	1.223	2.573	0.08860	0.45844
RegenerationR6	-0.397	2.573	0.58721	0.86226
RegenerationBL	1.887	2.573	0.18475	0.51531
RegenerationTP	3.008	2.573	0.09579	0.48493

Genes with expression patterns similar to MligTC455_16273

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16273	179	3.72	Mlig455_059027	Neo: - Age: logFC(26M/2M)=0.682	TRPM1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_059027 {REF} {Length: 3721} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=91.5]; Ankyrin repeats (many copies) [PF13637.8, score=65.4]; Ankyrin repeats (many copies) [PF13857.8, score=60.1]; Ankyrin repeat [PF13606.8, score=58.7]; Ion transport protein [PF00520.33, score=50.9]; Ankyrin repeat [PF00023.32, score=37.6]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=124, Expect=8e-28]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=123, Expect=1e-27]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=125, Expect=2e-28]} {Dmel: FBgn0005614, trpl, transient receptor potential-like, [Score=71.2, Expect=5e-12]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=94.7, Expect=3e-19]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=199, Expect=4e-52]} {RNA1509_2368} {RNA1310_977} {RNA815_2896}
2.	MligTC455_24026	610	12.71	Mlig455_006439	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.479	DMBT1	1.83	-	-	-	0.872	-	0.958	Mlig455_006439 {REF} {Length: 2543} {Pfam: Zona pellucida-like domain [PF00100.25, score=88.4]; Scavenger receptor cysteine-rich domain [PF00530.20, score=66.6]} {Human: ENSG00000187908, DMBT1, deleted in malignant brain tumors 1, [Score=62.0, Expect=3e-09]} {Smed: dd_Smed_v6_8185_0_1, dd_Smed_v6_8185_0_1, [RH, Score=78.6, Expect=3e-15]} {RNA1509_6352} {RNA1310_8273} {RNA815_2734}
3.	MligTC455_51833	355	7.4	Mlig455_020965	Neo: Int S/G2/M Age: Down-Down-Up		1.689	-	-	-	0.959	-	0.730	Mlig455_020965 {REF} {Length: 3849} {RNA1509_11544} {RNA1310_10250.1} {RNA815_27684}
4.	MligTC455_29201	1280	26.67	Mlig455_049817	Neo: - Age: - Regeneration-downregulated BL: -1.729 Regeneration-depleted BL: -1.729	OTOF	0.973	-	-	-	-	-	0.973	Mlig455_049817 {REF} {Length: 7973} {Pfam: C2 domain [PF00168.32, score=225.3]; FerB (NUC096) domain [PF08150.14, score=99.1]; Ferlin C-terminus [PF16165.7, score=97.7]; FerI (NUC094) domain [PF08151.14, score=61.5]} {Human: ENSG00000115155, OTOF, otoferlin, [RH, Score=910, Expect=0.0]} {Mouse: ENSMUSG00000062372, Otof, otoferlin, [RH, Score=915, Expect=0.0]} {Dmel: FBgn0266757, mfr, misfire, [RH, Score=301, Expect=4e-84]} {Celegans: WBGene00001414, fer-1, Sperm vesicle fusion protein fer-1, [Score=150, Expect=9e-36]} {Smed: dd_Smed_v6_5915_0_1, dd_Smed_v6_5915_0_1, [Score=1476, Expect=0.0]} {RNA1509_5256} {RNA1310_1416.2} {RNA815_411.1}
5.	MligTC455_29202	397	8.26	Mlig455_016520	Neo: - Age: Up-Down-Up	OTOF	0.967	-	-	-	-	-	0.967	Mlig455_016520 {REF} {Length: 3035} {Pfam: C2 domain [PF00168.32, score=46.4]} {Human: ENSG00000115155, OTOF, otoferlin, [Score=310, Expect=3e-90]} {Mouse: ENSMUSG00000062372, Otof, otoferlin, [Score=302, Expect=6e-88]} {Dmel: FBgn0266757, mfr, misfire, [Score=131, Expect=1e-31]} {Celegans: WBGene00001414, fer-1, Sperm vesicle fusion protein fer-1, [Score=73.6, Expect=4e-13]} {Smed: dd_Smed_v6_5915_0_1, dd_Smed_v6_5915_0_1, [Score=452, Expect=6e-140]} {RNA1509_5256} {RNA1310_1035} {RNA815_411.1}
6.	MligTC455_15551	466	9.71	Mlig455_055903, Mlig455_055949	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.298	STRIP2	0.962	-	-	-	-	-	0.962	Mlig455_055903 {REF} {Length: 3475} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3402) [PF11882.10, score=281.0]; N1221-like protein [PF07923.15, score=153.3]} {Human: ENSG00000128578, STRIP2, striatin interacting protein 2, [Score=612, Expect=0.0]; ENSG00000143093, STRIP1, striatin interacting protein 1, [Score=608, Expect=0.0]} {Mouse: ENSMUSG00000039629, Strip2, striatin interacting protein 2, [Score=613, Expect=0.0]; ENSMUSG00000014601, Strip1, striatin interacting protein 1, [Score=603, Expect=0.0]} {Dmel: FBgn0035437, Strip, Striatin interacting protein, [RH, Score=573, Expect=0.0]} {Celegans: WBGene00017349, farl-11, FAR (Factor ARrest) Like, [Score=385, Expect=9e-120]} {Smed: dd_Smed_v6_2332_0_1, dd_Smed_v6_2332_0_1, [Score=492, Expect=5e-161]} {RNA1509_18666} {RNA1310_6909, RNA1509_18666} {RNA1509_18666, RNA815_8627} Mlig455_055949 {REF} {Length: 3481} {Pfam: Domain of unknown function (DUF3402) [PF11882.10, score=284.3]; N1221-like protein [PF07923.15, score=148.2]} {Human: ENSG00000128578, STRIP2, striatin interacting protein 2, [Score=615, Expect=0.0]; ENSG00000143093, STRIP1, striatin interacting protein 1, [Score=607, Expect=0.0]} {Mouse: ENSMUSG00000039629, Strip2, striatin interacting protein 2, [Score=617, Expect=0.0]; ENSMUSG00000014601, Strip1, striatin interacting protein 1, [Score=602, Expect=0.0]} {Dmel: FBgn0035437, Strip, Striatin interacting protein, [Score=462, Expect=5e-150]} {Celegans: WBGene00017349, farl-11, FAR (Factor ARrest) Like, [Score=381, Expect=2e-118]} {Smed: dd_Smed_v6_2332_0_1, dd_Smed_v6_2332_0_1, [Score=491, Expect=1e-160]} {RNA1509_18666} {RNA1310_6909} {RNA815_8627}
7.	MligTC455_23787	935	19.48	Mlig455_003434, Mlig455_030657	Neo: - Age: logFC(26M/2M)=-0.252	LRRC74B	0.958	-	-	-	-	-	0.958	Mlig455_003434 {REF} {Length: 2540} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=84.8]; EF-hand domain pair [PF13499.8, score=40.1]; EF hand [PF00036.34, score=35.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=31.3]; EF-hand domain [PF13405.8, score=30.8]; EF-hand domain pair [PF13833.8, score=29.5]; Leucine Rich Repeat [PF00560.35, score=25.9]; EF hand [PF13202.8, score=19.7]} {Human: ENSG00000187905, LRRC74B, leucine rich repeat containing 74B, [RH, Score=249, Expect=2e-77]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [RH, Score=248, Expect=4e-76]} {Dmel: FBgn0051635, CG31635, [Score=50.8, Expect=2e-06]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=63.5, Expect=2e-10]} {Smed: dd_Smed_v6_15909_0_1, dd_Smed_v6_15909_0_1, [RH, Score=389, Expect=9e-131]} {RNA1509_28593} {RNA1310_6555} {RNA815_1932.1} Mlig455_030657 {REF} {Length: 2784} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=84.8]; EF-hand domain pair [PF13499.8, score=40.1]; EF hand [PF00036.34, score=35.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=31.3]; EF-hand domain [PF13405.8, score=30.8]; EF-hand domain pair [PF13833.8, score=29.5]; Leucine Rich Repeat [PF00560.35, score=25.9]; EF hand [PF13202.8, score=19.7]} {Human: ENSG00000187905, LRRC74B, leucine rich repeat containing 74B, [RH, Score=249, Expect=2e-77]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [RH, Score=248, Expect=4e-76]} {Dmel: FBgn0051635, CG31635, [Score=50.8, Expect=3e-06]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=63.5, Expect=2e-10]} {Smed: dd_Smed_v6_15909_0_1, dd_Smed_v6_15909_0_1, [RH, Score=389, Expect=7e-131]} {RNA1509_6554} {RNA1310_6555} {RNA815_1932.1}
8.	MligTC455_43906	878	18.29	Mlig455_044333, Mlig455_044345	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.277	RAI14	0.957	-	-	-	-	-	0.957	Mlig455_044333 {REF} {Length: 5825} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=81.1]; Ankyrin repeat [PF00023.32, score=72.8]; Ankyrin repeats (many copies) [PF13637.8, score=63.6]; Ankyrin repeat [PF13606.8, score=48.5]; Ankyrin repeats (many copies) [PF13857.8, score=44.2]} {Human: ENSG00000039560, RAI14, retinoic acid induced 14, [Score=90.1, Expect=3e-17]} {Mouse: ENSMUSG00000022246, Rai14, retinoic acid induced 14, [Score=94.4, Expect=9e-19]; ENSMUSG00000007827, Ankrd26, ankyrin repeat domain 26, [Score=89.7, Expect=3e-17]} {Dmel: FBgn0039590, CG10011, [Score=82.4, Expect=4e-15]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=85.9, Expect=3e-16]} {Smed: dd_Smed_v6_6201_0_1, dd_Smed_v6_6201_0_1, [Score=73.9, Expect=7e-13]} {RNA1509_7603} {RNA1310_960.3} {RNA815_5173} Mlig455_044345 {REF} {Length: 6035} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=87.7]; Ankyrin repeat [PF00023.32, score=72.9]; Ankyrin repeats (many copies) [PF13637.8, score=66.8]; Ankyrin repeats (many copies) [PF13857.8, score=50.5]; Ankyrin repeat [PF13606.8, score=50.0]} {Human: ENSG00000039560, RAI14, retinoic acid induced 14, [Score=94.7, Expect=9e-19]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=92.0, Expect=6e-19]} {Mouse: ENSMUSG00000022246, Rai14, retinoic acid induced 14, [Score=99.4, Expect=3e-20]} {Dmel: FBgn0039590, CG10011, [Score=87.4, Expect=1e-16]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=86.3, Expect=2e-16]} {Smed: dd_Smed_v6_7952_0_2, dd_Smed_v6_7952_0_2, [Score=80.5, Expect=8e-15]} {RNA1509_7603} {RNA1310_960.3} {RNA815_5173}
9.	MligTC455_33393	287	5.98	Mlig455_041291	Neo: - Age: -	CEP170B	0.955	-	-	-	-	-	0.955	Mlig455_041291 {REF} {Length: 2842} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=31.9]} {Human: ENSG00000099814, CEP170B, centrosomal protein 170B, [Score=81.3, Expect=5e-15]} {Mouse: ENSMUSG00000057335, Cep170, centrosomal protein 170, [Score=87.4, Expect=4e-17]} {Smed: dd_Smed_v6_9728_0_1, dd_Smed_v6_9728_0_1, [Score=69.7, Expect=5e-12]} {RNA1509_27913} {RNA1310_6536} {RNA815_19665}
10.	MligTC455_50819	291	6.07	Mlig455_060356	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_060356 {REF} {Length: 2286} {TRANSSPLICED} {Smed: dd_Smed_v6_5953_0_1, dd_Smed_v6_5953_0_1, [RH, Score=92.0, Expect=2e-21]} {RNA1509_34165} {RNA1310_28074.2} {RNA815_19770}
11.	MligTC455_15349	404	8.41	Mlig455_026642	Neo: - Age: logFC(26M/2M)=-0.377		0.952	-	-	-	-	-	0.952	Mlig455_026642 {REF} {Length: 3114} {Pfam: EF-hand domain [PF13405.8, score=70.7]; EF-hand domain pair [PF13499.8, score=54.9]; EF hand [PF00036.34, score=48.7]; EF-hand domain pair [PF13833.8, score=33.4]; EF-hand domain [PF08976.13, score=22.0]} {Dmel: FBgn0038163, CG10841, [RH, Score=209, Expect=1e-56]} {Smed: dd_Smed_v6_8441_0_1, dd_Smed_v6_8441_0_1, [RH, Score=828, Expect=0.0]} {RNA1509_4624} {RNA1310_4455} {RNA815_1290}
12.	MligTC455_42969	549	11.44	Mlig455_016709	Neo: - Age: Down-Up-Down Region-enriched R4: 1.336/0.03654	CCDC105	0.952	-	-	-	-	-	0.952	Mlig455_016709 {REF} {Length: 2752} {Pfam: Tektin family [PF03148.16, score=75.8]} {Human: ENSG00000160994, CCDC105, coiled-coil domain containing 105, [RH, Score=118, Expect=1e-28]} {Mouse: ENSMUSG00000078442, Ccdc105, coiled-coil domain containing 105, [RH, Score=129, Expect=1e-32]} {Smed: dd_Smed_v6_14773_0_1, dd_Smed_v6_14773_0_1, [RH, Score=224, Expect=4e-69]} {RNA1509_16464, RNA1509_59777} {RNA1310_6775.2, RNA1509_16464, RNA1509_59777} {RNA1509_16464, RNA1509_59777, RNA815_2314.1}
13.	MligTC455_25936	273	5.68	Mlig455_037036	Neo: - Age: Up-Down-Down	KIAA1841	0.95	-	-	-	-	-	0.950	Mlig455_037036 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3342) [PF11822.10, score=118.5]} {Human: ENSG00000162929, KIAA1841, KIAA1841, [Score=322, Expect=6e-99]} {Mouse: ENSMUSG00000042208, 0610010F05Rik, RIKEN cDNA 0610010F05 gene, [Score=380, Expect=5e-121]} {Dmel: FBgn0036031, CG6761, [Score=203, Expect=1e-54]} {Smed: dd_Smed_v6_11436_0_1, dd_Smed_v6_11436_0_1, [Score=335, Expect=1e-104]} {RNA1509_18348} {RNA1310_9169} {RNA815_752.1}
14.	MligTC455_43284	529	11.03	Mlig455_006526	Neo: - Age: logFC(26M/2M)=-0.435	ARMC3	0.95	-	-	-	-	-	0.950	Mlig455_006526 {REF} {Length: 3183} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=100.6]; Ethylene-responsive protein kinase Le-CTR1 [PF14381.8, score=95.8]; HEAT repeats [PF13646.8, score=73.0]; HEAT repeat [PF02985.24, score=53.9]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=42.3]; HEAT-like repeat [PF13513.8, score=42.2]; V-ATPase subunit H [PF11698.10, score=40.9]; Armadillo-like [PF04826.15, score=28.2]; Adaptin N terminal region [PF01602.22, score=21.9]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=18.7]} {Human: ENSG00000165309, ARMC3, armadillo repeat containing 3, [Score=526, Expect=3e-173]} {Mouse: ENSMUSG00000037683, Armc3, armadillo repeat containing 3, [RH, Score=492, Expect=4e-160]} {Dmel: FBgn0033794, CG13326, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_9679_0_1, dd_Smed_v6_9679_0_1, [RH, Score=743, Expect=0.0]} {RNA1509_9668} {RNA1310_4998.1, RNA1509_9668} {RNA1509_9668, RNA815_8459}

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