TomoSeq data search

Data search

Results for MligTC455_16321

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16321

1069

22.27

Mlig455_052825

Neo: Int S/G2/M

Age: Down-Up-Down

PRPF38B

Mlig455_052825 {REF} {Length: 1972} {Pfam: PRP38 family [PF03371.17, score=167.6]} {Human: ENSG00000134186, PRPF38B, pre-mRNA processing factor 38B, [RH, Score=278, Expect=2e-88]} {Mouse: ENSMUSG00000027881, Prpf38b, PRP38 pre-mRNA processing factor 38 (yeast) domain containing B, [RH, Score=278, Expect=8e-89]} {Dmel: FBgn0030468, CG1622, [RH, Score=255, Expect=1e-81]} {Celegans: WBGene00022434, Y108G3AL.2, [RH, Score=223, Expect=2e-70]} {Smed: dd_Smed_v6_1839_0_1, dd_Smed_v6_1839_0_1, [RH, Score=266, Expect=2e-87]} {RNA1509_14490, RNA1509_51301} {RNA1310_18362, RNA1509_14490, RNA1509_51301} {RNA1509_14490, RNA1509_51301, RNA815_8334}

Cumulative graph for MligTC455_16321

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.512	4.7	0.59078	1.00000
RegionR2	-0.266	4.7	0.51082	0.88863
RegionR3	-0.228	4.7	0.50614	0.99698
RegionR4	0.6	4.7	0.09520	0.29754
RegionR5	0.414	4.7	0.16456	0.42913
RegionR6	0.116	4.7	0.73095	1.00000
RegionR7	-0.423	4.7	0.38729	1.00000
RegionR8	0.299	4.7	0.58980	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.063	4.7	0.96233	1.00000
RegenerationR2	0.531	4.7	0.10611	0.51215
RegenerationR3	0.674	4.7	0.06571	0.43148
RegenerationR4	0.541	4.7	0.12269	0.53228
RegenerationR5	0.45	4.7	0.16532	0.59090
RegenerationR6	1.013	4.7	0.00432	0.07910
RegenerationBL	0.912	4.7	0.02170	0.16021
RegenerationTP	0.673	4.7	0.14535	0.56783

Genes with expression patterns similar to MligTC455_16321

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16321	1069	22.27	Mlig455_052825	Neo: Int S/G2/M Age: Down-Up-Down	PRPF38B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_052825 {REF} {Length: 1972} {Pfam: PRP38 family [PF03371.17, score=167.6]} {Human: ENSG00000134186, PRPF38B, pre-mRNA processing factor 38B, [RH, Score=278, Expect=2e-88]} {Mouse: ENSMUSG00000027881, Prpf38b, PRP38 pre-mRNA processing factor 38 (yeast) domain containing B, [RH, Score=278, Expect=8e-89]} {Dmel: FBgn0030468, CG1622, [RH, Score=255, Expect=1e-81]} {Celegans: WBGene00022434, Y108G3AL.2, [RH, Score=223, Expect=2e-70]} {Smed: dd_Smed_v6_1839_0_1, dd_Smed_v6_1839_0_1, [RH, Score=266, Expect=2e-87]} {RNA1509_14490, RNA1509_51301} {RNA1310_18362, RNA1509_14490, RNA1509_51301} {RNA1509_14490, RNA1509_51301, RNA815_8334}
2.	MligTC455_16320	1066	22.21	Mlig455_052823	Neo: - Age: -	PRPF38B	5.995	1.000	0.997	1.000	1.000	1.000	0.998	Mlig455_052823 {REF} {Length: 1207} {Pfam: PRP38 family [PF03371.17, score=114.3]} {Human: ENSG00000134186, PRPF38B, pre-mRNA processing factor 38B, [RH, Score=187, Expect=3e-56]} {Mouse: ENSMUSG00000027881, Prpf38b, PRP38 pre-mRNA processing factor 38 (yeast) domain containing B, [Score=186, Expect=8e-55]} {Dmel: FBgn0030468, CG1622, [Score=108, Expect=9e-29]} {Celegans: WBGene00022434, Y108G3AL.2, [Score=146, Expect=6e-42]} {Smed: dd_Smed_v6_1839_0_1, dd_Smed_v6_1839_0_1, [Score=176, Expect=1e-53]} {RNA1509_14490} {RNA1310_18362} {RNA815_8334}
3.	MligTC455_41526	617	12.85	Mlig455_023413	Neo: - Age: Down-Down-Up, logFC(26M/2M)=1.035	TXLNA	0.978	-	-	-	0.978	-	-	Mlig455_023413 {REF} {Length: 3036} {TRANSSPLICED} {Pfam: Myosin-like coiled-coil protein [PF09728.11, score=295.5]} {Human: ENSG00000084652, TXLNA, taxilin alpha, [RH, Score=258, Expect=2e-78]} {Mouse: ENSMUSG00000053841, Txlna, taxilin alpha, [RH, Score=258, Expect=1e-78]} {Dmel: FBgn0039379, CG5886, [RH, Score=164, Expect=4e-44]} {Celegans: WBGene00011917, T22C1.6, [RH, Score=113, Expect=2e-27]} {Smed: dd_Smed_v6_5772_0_1, dd_Smed_v6_5772_0_1, [RH, Score=206, Expect=6e-61]} {RNA1509_8650} {RNA1310_6502.1, RNA1509_8650} {RNA1509_8650, RNA815_10103}
4.	MligTC455_33027	2664	55.51	Mlig455_023599, Mlig455_068105	Neo: - Age: -		0.96	-	-	-	-	-	0.960	Mlig455_023599 {REF} {Length: 4481} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_7165} {RNA1310_2639.1} {RNA815_1955} Mlig455_068105 {REF} {Length: 4959} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27370, RNA1509_48007, RNA1509_58775, RNA1509_7165} {RNA1310_2639.1, RNA1509_27370, RNA1509_48007, RNA1509_58775, RNA1509_7165} {RNA1509_27370, RNA1509_48007, RNA1509_58775, RNA1509_7165, RNA815_1955}
5.	MligTC455_45601	917	19.11	Mlig455_009807	Neo: - Age: -	SLC15A4	0.953	-	-	-	-	-	0.953	Mlig455_009807 {REF} {Length: 2847} {TRANSSPLICED} {Pfam: POT family [PF00854.23, score=234.1]} {Human: ENSG00000139370, SLC15A4, solute carrier family 15 member 4, [RH, Score=309, Expect=3e-96]} {Mouse: ENSMUSG00000029416, Slc15a4, solute carrier family 15, member 4, [RH, Score=305, Expect=8e-95]} {Celegans: WBGene00003877, pept-1, Peptide transporter family 1, [Score=77.4, Expect=2e-14]} {Smed: dd_Smed_v6_8178_0_1, dd_Smed_v6_8178_0_1, [RH, Score=254, Expect=9e-76]} {RNA1509_31535, RNA1509_42147} {RNA1310_3190.1, RNA1509_42147} {RNA1509_42147, RNA815_1889}
6.	MligTC455_22020	269	5.6	Mlig455_031510	Neo: - Age: logFC(26M/2M)=-0.289	MAP3K7	0.952	-	-	-	-	-	0.952	Mlig455_031510 {REF} {Length: 3506} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=169.0]; Protein kinase domain [PF00069.27, score=168.0]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [RH, Score=229, Expect=1e-67]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [RH, Score=229, Expect=1e-67]} {Dmel: FBgn0026323, Tak1, TGF-beta activated kinase 1, [RH, Score=231, Expect=1e-67]} {Celegans: WBGene00003396, mom-4, Mitogen-activated protein kinase kinase kinase mom-4, [RH, Score=159, Expect=3e-42]} {Smed: dd_Smed_v6_2589_0_2, dd_Smed_v6_2589_0_2, [RH, Score=195, Expect=8e-57]} {RNA1509_28110} {RNA1310_9032, RNA1509_28110} {RNA1509_28110, RNA815_3215}

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