Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_16369 | 391 | 8.14 | Mlig455_024375, Mlig455_024491 | Neo: - Age: - |
ZNF256, ZNF628 | Mlig455_024375 {REF} {Length: 3845} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=45.8]; Zinc finger, C2H2 type [PF00096.28, score=29.7]; C2H2-type zinc finger [PF13894.8, score=21.8]} {Human: ENSG00000152454, ZNF256, zinc finger protein 256, [Score=99.8, Expect=2e-21]; ENSG00000130856, ZNF236, zinc finger protein 236, [Score=99.0, Expect=6e-21]; ENSG00000197483, ZNF628, zinc finger protein 628, [Score=98.2, Expect=8e-21]; ENSG00000102870, ZNF629, zinc finger protein 629, [Score=95.5, Expect=5e-20]; ENSG00000122386, ZNF205, zinc finger protein 205, [Score=95.1, Expect=4e-20]; ENSG00000178187, ZNF454, zinc finger protein 454, [Score=95.1, Expect=4e-20]} {Mouse: ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=98.2, Expect=6e-21]; ENSMUSG00000093910, Zfp853, zinc finger protein 853, [Score=96.7, Expect=1e-20]; ENSMUSG00000045639, Zfp629, zinc finger protein 629, [Score=96.3, Expect=2e-20]; ENSMUSG00000074406, Zfp628, zinc finger protein 628, [Score=95.5, Expect=3e-20]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=95.1, Expect=1e-20]; ENSMUSG00000058291, Zfp68, zinc finger protein 68, [Score=94.0, Expect=6e-20]; ENSMUSG00000072915, Gm12258, predicted gene 12258, [Score=94.0, Expect=3e-22]; ENSMUSG00000048728, Zfp454, zinc finger protein 454, [Score=93.6, Expect=8e-20]; ENSMUSG00000047342, Zfp286, zinc finger protein 286, [Score=93.6, Expect=7e-20]; ENSMUSG00000037007, Zfp113, zinc finger protein 113, [Score=93.6, Expect=5e-20]} {Dmel: FBgn0035625, Blimp-1, [Score=92.0, Expect=4e-19]} {Celegans: WBGene00000483, che-1, Transcription factor che-1, [Score=85.1, Expect=9e-19]} {Smed: dd_Smed_v6_85977_0_1, dd_Smed_v6_85977_0_1, [Score=99.8, Expect=2e-24]} {RNA1509_14204} {RNA1310_11199} {RNA815_8539.1} Mlig455_024491 {REF} {Length: 4110} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=45.2]; Zinc finger, C2H2 type [PF00096.28, score=36.9]; C2H2-type zinc finger [PF13894.8, score=30.9]} {Human: ENSG00000197483, ZNF628, zinc finger protein 628, [Score=99.0, Expect=5e-21]; ENSG00000152454, ZNF256, zinc finger protein 256, [Score=99.0, Expect=3e-21]; ENSG00000130856, ZNF236, zinc finger protein 236, [Score=98.6, Expect=7e-21]; ENSG00000102870, ZNF629, zinc finger protein 629, [Score=95.1, Expect=7e-20]; ENSG00000122386, ZNF205, zinc finger protein 205, [Score=95.1, Expect=5e-20]; ENSG00000178187, ZNF454, zinc finger protein 454, [Score=95.1, Expect=4e-20]} {Mouse: ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=98.2, Expect=7e-21]; ENSMUSG00000074406, Zfp628, zinc finger protein 628, [Score=96.3, Expect=2e-20]; ENSMUSG00000045639, Zfp629, zinc finger protein 629, [Score=95.9, Expect=3e-20]; ENSMUSG00000072915, Gm12258, predicted gene 12258, [Score=95.9, Expect=6e-23]; ENSMUSG00000093910, Zfp853, zinc finger protein 853, [Score=95.5, Expect=2e-20]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=95.1, Expect=1e-20]; ENSMUSG00000058291, Zfp68, zinc finger protein 68, [Score=94.7, Expect=4e-20]; ENSMUSG00000047342, Zfp286, zinc finger protein 286, [Score=93.6, Expect=9e-20]} {Dmel: FBgn0035625, Blimp-1, [Score=93.2, Expect=2e-19]} {Celegans: WBGene00000483, che-1, Transcription factor che-1, [Score=85.1, Expect=9e-19]} {Smed: dd_Smed_v6_85977_0_1, dd_Smed_v6_85977_0_1, [Score=100, Expect=8e-25]} {RNA1509_14204, RNA1509_52778} {RNA1310_11199, RNA1509_52778} {RNA1509_52778, RNA815_8539.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.079 | 3.474 | 0.95925 | 1.00000 | |
RegionR2 | 0.021 | 3.474 | 0.97259 | 1.00000 | |
RegionR3 | -0.3 | 3.474 | 0.55483 | 1.00000 | |
RegionR4 | 0.053 | 3.474 | 0.92651 | 1.00000 | |
RegionR5 | 0.144 | 3.474 | 0.75004 | 1.00000 | |
RegionR6 | 0.229 | 3.474 | 0.64108 | 1.00000 | |
RegionR7 | 1.012 | 3.474 | 0.07580 | 0.53146 | |
RegionR8 | -1.079 | 3.474 | 0.27950 | 0.90495 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -6.111 | 3.474 | 0.23056 | 0.96044 | |
RegenerationR2 | 0.608 | 3.474 | 0.18234 | 0.62564 | |
RegenerationR3 | 0.228 | 3.474 | 0.68432 | 0.94143 | |
RegenerationR4 | 0.315 | 3.474 | 0.57715 | 0.90448 | |
RegenerationR5 | 0.556 | 3.474 | 0.26039 | 0.69211 | |
RegenerationR6 | 0.255 | 3.474 | 0.63919 | 0.89271 | |
RegenerationBL | -0.738 | 3.474 | 0.34536 | 0.71249 | |
RegenerationTP | 0.349 | 3.474 | 0.64336 | 0.98516 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_16369 | 391 | 8.14 | Mlig455_024375, Mlig455_024491 | Neo: - Age: - |
ZNF256, ZNF628 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024375 {REF} {Length: 3845} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=45.8]; Zinc finger, C2H2 type [PF00096.28, score=29.7]; C2H2-type zinc finger [PF13894.8, score=21.8]} {Human: ENSG00000152454, ZNF256, zinc finger protein 256, [Score=99.8, Expect=2e-21]; ENSG00000130856, ZNF236, zinc finger protein 236, [Score=99.0, Expect=6e-21]; ENSG00000197483, ZNF628, zinc finger protein 628, [Score=98.2, Expect=8e-21]; ENSG00000102870, ZNF629, zinc finger protein 629, [Score=95.5, Expect=5e-20]; ENSG00000122386, ZNF205, zinc finger protein 205, [Score=95.1, Expect=4e-20]; ENSG00000178187, ZNF454, zinc finger protein 454, [Score=95.1, Expect=4e-20]} {Mouse: ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=98.2, Expect=6e-21]; ENSMUSG00000093910, Zfp853, zinc finger protein 853, [Score=96.7, Expect=1e-20]; ENSMUSG00000045639, Zfp629, zinc finger protein 629, [Score=96.3, Expect=2e-20]; ENSMUSG00000074406, Zfp628, zinc finger protein 628, [Score=95.5, Expect=3e-20]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=95.1, Expect=1e-20]; ENSMUSG00000058291, Zfp68, zinc finger protein 68, [Score=94.0, Expect=6e-20]; ENSMUSG00000072915, Gm12258, predicted gene 12258, [Score=94.0, Expect=3e-22]; ENSMUSG00000048728, Zfp454, zinc finger protein 454, [Score=93.6, Expect=8e-20]; ENSMUSG00000047342, Zfp286, zinc finger protein 286, [Score=93.6, Expect=7e-20]; ENSMUSG00000037007, Zfp113, zinc finger protein 113, [Score=93.6, Expect=5e-20]} {Dmel: FBgn0035625, Blimp-1, [Score=92.0, Expect=4e-19]} {Celegans: WBGene00000483, che-1, Transcription factor che-1, [Score=85.1, Expect=9e-19]} {Smed: dd_Smed_v6_85977_0_1, dd_Smed_v6_85977_0_1, [Score=99.8, Expect=2e-24]} {RNA1509_14204} {RNA1310_11199} {RNA815_8539.1} Mlig455_024491 {REF} {Length: 4110} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=45.2]; Zinc finger, C2H2 type [PF00096.28, score=36.9]; C2H2-type zinc finger [PF13894.8, score=30.9]} {Human: ENSG00000197483, ZNF628, zinc finger protein 628, [Score=99.0, Expect=5e-21]; ENSG00000152454, ZNF256, zinc finger protein 256, [Score=99.0, Expect=3e-21]; ENSG00000130856, ZNF236, zinc finger protein 236, [Score=98.6, Expect=7e-21]; ENSG00000102870, ZNF629, zinc finger protein 629, [Score=95.1, Expect=7e-20]; ENSG00000122386, ZNF205, zinc finger protein 205, [Score=95.1, Expect=5e-20]; ENSG00000178187, ZNF454, zinc finger protein 454, [Score=95.1, Expect=4e-20]} {Mouse: ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=98.2, Expect=7e-21]; ENSMUSG00000074406, Zfp628, zinc finger protein 628, [Score=96.3, Expect=2e-20]; ENSMUSG00000045639, Zfp629, zinc finger protein 629, [Score=95.9, Expect=3e-20]; ENSMUSG00000072915, Gm12258, predicted gene 12258, [Score=95.9, Expect=6e-23]; ENSMUSG00000093910, Zfp853, zinc finger protein 853, [Score=95.5, Expect=2e-20]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=95.1, Expect=1e-20]; ENSMUSG00000058291, Zfp68, zinc finger protein 68, [Score=94.7, Expect=4e-20]; ENSMUSG00000047342, Zfp286, zinc finger protein 286, [Score=93.6, Expect=9e-20]} {Dmel: FBgn0035625, Blimp-1, [Score=93.2, Expect=2e-19]} {Celegans: WBGene00000483, che-1, Transcription factor che-1, [Score=85.1, Expect=9e-19]} {Smed: dd_Smed_v6_85977_0_1, dd_Smed_v6_85977_0_1, [Score=100, Expect=8e-25]} {RNA1509_14204, RNA1509_52778} {RNA1310_11199, RNA1509_52778} {RNA1509_52778, RNA815_8539.1} |
2. | MligTC455_39613 | 739 | 15.39 | Mlig455_049607 | Neo: - Age: - |
CIC | 2.458 | - | - | 0.744 | 0.764 | 0.950 | - | Mlig455_049607 {REF} {Length: 6015} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=68.1]; Domain of unknown function (DUF4819) [PF16090.7, score=41.4]; HMG-box domain [PF09011.12, score=36.1]} {Human: ENSG00000079432, CIC, capicua transcriptional repressor, [RH, Score=112, Expect=2e-24]} {Mouse: ENSMUSG00000005442, Cic, capicua transcriptional repressor, [RH, Score=112, Expect=8e-25]} {Dmel: FBgn0262582, cic, capicua, [RH, Score=103, Expect=5e-22]} {Celegans: WBGene00001560, gei-3, GEX Interacting protein, [RH, Score=103, Expect=3e-22]} {Smed: dd_Smed_v6_4601_0_1, dd_Smed_v6_4601_0_1, [RH, Score=103, Expect=3e-22]} {RNA1509_21240, RNA1509_23108, RNA1509_23279, RNA1509_31171} {RNA1310_3975.1, RNA1509_21240, RNA1509_23108, RNA1509_23279, RNA1509_31171} {RNA1509_21240, RNA1509_23108, RNA1509_23279, RNA1509_31171, RNA815_15826} |
3. | MligTC455_29037 | 1996 | 41.58 | Mlig455_041110 | Neo: - Age: - |
BSDC1 | 1.736 | - | - | - | 0.968 | - | 0.768 | Mlig455_041110 {REF} {Length: 3772} {TRANSSPLICED} {Pfam: BSD domain [PF03909.19, score=52.4]} {Human: ENSG00000160058, BSDC1, BSD domain containing 1, [RH, Score=132, Expect=2e-33]} {Mouse: ENSMUSG00000040859, Bsdc1, BSD domain containing 1, [RH, Score=132, Expect=8e-34]} {Celegans: WBGene00022401, Y97E10AR.6, [RH, Score=69.7, Expect=1e-12]} {RNA1509_3702, RNA1509_37649} {RNA1310_4883, RNA1509_37649} {RNA1509_37649, RNA815_6374} |
4. | MligTC455_53692 | 2518 | 52.45 | Mlig455_040714 | Neo: - Age: - |
1.717 | - | - | - | 0.962 | 0.755 | - | Mlig455_040714 {REF} {Length: 844} {TRANSSPLICED} {RNA1509_41711, RNA1509_4919} {RNA1310_41175, RNA1509_41711, RNA1509_4919} {RNA1509_41711, RNA1509_4919, RNA815_21835} | |
5. | MligTC455_35997 | 277 | 5.76 | Mlig455_067328 | Neo: - |
AK5 | 1.671 | - | - | - | 0.707 | 0.964 | - | Mlig455_067328 {REF} {Length: 2734} {TRANSSPLICED} {Human: ENSG00000154027, AK5, adenylate kinase 5, [Score=50.8, Expect=1e-06]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [Score=49.7, Expect=2e-06]} {RNA1509_17110} {RNA1310_19485, RNA1509_17110} {RNA1509_17110, RNA815_14117} |
6. | MligTC455_33021 | 930 | 19.37 | Mlig455_029946 | Neo: - Age: - |
CNOT1 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_029946 {REF} {Length: 11357} {Pfam: CCR4-Not complex component, Not1 [PF04054.17, score=392.8]; CCR4-NOT transcription complex subunit 1 CAF1-binding domain [PF16415.7, score=260.6]; Domain of unknown function (DUF3819) [PF12842.9, score=127.4]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=60.7]; CCR4-NOT transcription complex subunit 1 TTP binding domain [PF16417.7, score=49.5]} {Human: ENSG00000125107, CNOT1, CCR4-NOT transcription complex subunit 1, [Score=788, Expect=0.0]} {Mouse: ENSMUSG00000036550, Cnot1, CCR4-NOT transcription complex, subunit 1, [Score=787, Expect=0.0]} {Dmel: FBgn0085436, Not1, [Score=666, Expect=0.0]} {Celegans: WBGene00002845, let-711, NTL-1a, [Score=553, Expect=2e-162]} {Smed: dd_Smed_v6_2389_0_1, dd_Smed_v6_2389_0_1, [Score=914, Expect=0.0]} {RNA1509_1462} {RNA1310_198.1} {RNA815_2251} |
7. | MligTC455_22347 | 140 | 2.91 | Mlig455_005470 | Neo: - Age: - |
0.96 | - | - | - | - | - | 0.960 | Mlig455_005470 {REF} {Length: 3771} {TRANSSPLICED} {RNA1509_35899} {RNA1310_20218} {RNA815_23054} | |
8. | MligTC455_17049 | 6274 | 130.71 | Mlig455_029792, Mlig455_029942 | Neo: - Age: logFC(26M/2M)=-0.392 |
EFCAB2 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_029792 {REF} {Length: 935} {Pfam: EF-hand domain pair [PF13499.8, score=44.0]; EF-hand domain [PF13405.8, score=39.7]; EF hand [PF00036.34, score=28.8]; EF-hand domain [PF14658.8, score=24.5]} {Human: ENSG00000203666, EFCAB2, EF-hand calcium binding domain 2, [RH, Score=204, Expect=8e-67]} {Mouse: ENSMUSG00000026495, Efcab2, EF-hand calcium binding domain 2, [RH, Score=209, Expect=9e-70]} {Dmel: FBgn0034481, CG11041, [RH, Score=139, Expect=1e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=82.0, Expect=3e-20]} {Smed: dd_Smed_v6_11976_0_1, dd_Smed_v6_11976_0_1, [RH, Score=192, Expect=1e-63]} {RNA1509_6027, RNA1509_9780} {RNA1310_41624, RNA1509_6027, RNA1509_9780} {RNA1509_6027, RNA1509_9780, RNA815_18008} Mlig455_029942 {REF} {Length: 933} {Pfam: EF-hand domain pair [PF13499.8, score=44.0]; EF-hand domain [PF13405.8, score=39.7]; EF hand [PF00036.34, score=28.8]; EF-hand domain [PF14658.8, score=24.5]} {Human: ENSG00000203666, EFCAB2, EF-hand calcium binding domain 2, [RH, Score=204, Expect=8e-67]} {Mouse: ENSMUSG00000026495, Efcab2, EF-hand calcium binding domain 2, [RH, Score=209, Expect=9e-70]} {Dmel: FBgn0034481, CG11041, [RH, Score=139, Expect=1e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=82.0, Expect=3e-20]} {Smed: dd_Smed_v6_11976_0_1, dd_Smed_v6_11976_0_1, [RH, Score=192, Expect=1e-63]} {RNA1509_6027} {RNA1310_41624} {RNA815_18008} |
9. | MligTC455_24712 | 208 | 4.32 | Mlig455_044659 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_044659 {REF} {Length: 1720} {NoTransDecoderORF} {RNA1310_99438} | |
10. | MligTC455_10035 | 177 | 3.7 | Mlig455_070770 | Neo: Irradiation |
0.953 | - | - | - | - | 0.953 | - | Mlig455_070770 {REF} {Length: 1452} {NoTransDecoderORF} {RNA1509_18811} {RNA1310_39704} {RNA815_51915} | |
11. | MligTC455_31557 | 51 | 1.07 | Mlig455_021820 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_021820 {REF} {Length: 2336} {NoTransDecoderORF} {RNA1509_33996} {RNA1310_11993} {RNA815_38913} | |
12. | MligTC455_49071 | 1009 | 21.02 | Mlig455_033502, Mlig455_033505, Mlig455_069235 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.777/0.00192 |
FOPNL | 0.95 | - | - | - | - | 0.950 | - | Mlig455_033502 {REF} {Length: 2172} {TRANSSPLICED} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=57.2]; LisH [PF16045.7, score=22.9]} {Human: ENSG00000276914, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]; ENSG00000133393, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]} {Mouse: ENSMUSG00000022677, Fopnl, Fgfr1op N-terminal like, [RH, Score=130, Expect=4e-39]} {Smed: dd_Smed_v6_10047_0_1, dd_Smed_v6_10047_0_1, [RH, Score=122, Expect=8e-36]} {RNA1509_18846} {RNA1310_21832} {RNA815_27387} Mlig455_033505 {REF} {Length: 1889} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=57.2]; LisH [PF16045.7, score=22.9]} {Human: ENSG00000276914, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]; ENSG00000133393, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]} {Mouse: ENSMUSG00000022677, Fopnl, Fgfr1op N-terminal like, [RH, Score=130, Expect=4e-39]} {Smed: dd_Smed_v6_10047_0_1, dd_Smed_v6_10047_0_1, [RH, Score=122, Expect=8e-36]} {RNA1509_18846} {RNA1310_21832} {RNA815_27387} Mlig455_069235 {REF} {Length: 2088} {TRANSSPLICED} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=57.2]; LisH [PF16045.7, score=22.9]} {Human: ENSG00000276914, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]; ENSG00000133393, FOPNL, FGFR1OP N-terminal like, [RH, Score=125, Expect=6e-37]} {Mouse: ENSMUSG00000022677, Fopnl, Fgfr1op N-terminal like, [RH, Score=130, Expect=4e-39]} {Smed: dd_Smed_v6_10047_0_1, dd_Smed_v6_10047_0_1, [RH, Score=122, Expect=8e-36]} {RNA1509_18846, RNA1509_20340} {RNA1310_21832, RNA1509_18846, RNA1509_20340} {RNA1509_18846, RNA1509_20340, RNA815_27387} |