TomoSeq data search

Data search

Results for MligTC455_16447

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16447	24747	515.56	Mlig455_027872, Mlig455_027873	Neo: - Age: Down-Down-Up, logFC(26M/2M)=4.030 Region-enriched R4: 4.637/0.01215 Regeneration-upregulated BL: 7.240 Regeneration-enriched BL: 7.240	HMCN2	Mlig455_027872 {REF} {Length: 2869} {Pfam: von Willebrand factor type A domain [PF13519.8, score=88.9]; von Willebrand factor type A domain [PF00092.30, score=58.4]; DNA gyrase B [PF00204.27, score=20.5]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=80.9, Expect=8e-15]; ENSG00000143341, HMCN1, hemicentin 1, [Score=77.4, Expect=9e-14]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=76.3, Expect=1e-13]; ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=74.3, Expect=4e-13]; ENSMUSG00000007030, Vwa7, von Willebrand factor A domain containing 7, [Score=73.6, Expect=7e-13]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=88.2, Expect=1e-17]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=80.9, Expect=2e-15]} {RNA1509_6403} {RNA1310_5647.1} {RNA815_1802.1} Mlig455_027873 {REF} {Length: 3896} {Pfam: von Willebrand factor type A domain [PF13519.8, score=88.9]; von Willebrand factor type A domain [PF00092.30, score=58.4]; DNA gyrase B [PF00204.27, score=20.5]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=80.9, Expect=8e-15]; ENSG00000143341, HMCN1, hemicentin 1, [Score=77.4, Expect=9e-14]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=76.3, Expect=1e-13]; ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=74.3, Expect=4e-13]; ENSMUSG00000007030, Vwa7, von Willebrand factor A domain containing 7, [Score=73.6, Expect=7e-13]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=88.2, Expect=1e-17]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=80.9, Expect=2e-15]} {RNA1509_30517, RNA1509_6403} {RNA1310_5647.1, RNA1509_30517, RNA1509_6403} {RNA1509_30517, RNA1509_6403, RNA815_1802.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16447

24747

515.56

Mlig455_027872, Mlig455_027873

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=4.030

Region-enriched R4: 4.637/0.01215

Regeneration-upregulated BL: 7.240

Regeneration-enriched BL: 7.240

HMCN2

Mlig455_027872 {REF} {Length: 2869} {Pfam: von Willebrand factor type A domain [PF13519.8, score=88.9]; von Willebrand factor type A domain [PF00092.30, score=58.4]; DNA gyrase B [PF00204.27, score=20.5]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=80.9, Expect=8e-15]; ENSG00000143341, HMCN1, hemicentin 1, [Score=77.4, Expect=9e-14]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=76.3, Expect=1e-13]; ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=74.3, Expect=4e-13]; ENSMUSG00000007030, Vwa7, von Willebrand factor A domain containing 7, [Score=73.6, Expect=7e-13]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=88.2, Expect=1e-17]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=80.9, Expect=2e-15]} {RNA1509_6403} {RNA1310_5647.1} {RNA815_1802.1}

Mlig455_027873 {REF} {Length: 3896} {Pfam: von Willebrand factor type A domain [PF13519.8, score=88.9]; von Willebrand factor type A domain [PF00092.30, score=58.4]; DNA gyrase B [PF00204.27, score=20.5]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=80.9, Expect=8e-15]; ENSG00000143341, HMCN1, hemicentin 1, [Score=77.4, Expect=9e-14]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=76.3, Expect=1e-13]; ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=74.3, Expect=4e-13]; ENSMUSG00000007030, Vwa7, von Willebrand factor A domain containing 7, [Score=73.6, Expect=7e-13]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=88.2, Expect=1e-17]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=80.9, Expect=2e-15]} {RNA1509_30517, RNA1509_6403} {RNA1310_5647.1, RNA1509_30517, RNA1509_6403} {RNA1509_30517, RNA1509_6403, RNA815_1802.1}

Cumulative graph for MligTC455_16447

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.287	8.871	1.00000	1.00000
RegionR2	0.317	8.871	0.69693	1.00000
RegionR3	3.06	8.871	0.00752	0.12560
RegionR4	4.637	8.871	0.00122	0.01215
RegionR5	2.585	8.871	0.01964	0.09580
RegionR6	1.291	8.871	0.26112	0.84872
RegionR7	-0.378	8.871	0.91258	1.00000
RegionR8	-8.226	8.871	0.00425	0.11369

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.297	8.871	0.02065	0.57195
RegenerationR2	5.25	8.871	0.00107	0.04831
RegenerationR3	2.974	8.871	0.05484	0.40255
RegenerationR4	3.705	8.871	0.02547	0.25629
RegenerationR5	4.613	8.871	0.00296	0.09562
RegenerationR6	5.058	8.871	0.00148	0.04300
RegenerationBL	7.24	8.871	0.00000	0.00001	Specific for BL: 7.240
RegenerationTP	6.627	8.871	0.00017	0.01619

Genes with expression patterns similar to MligTC455_16447

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16447	24747	515.56	Mlig455_027872, Mlig455_027873	Neo: - Age: Down-Down-Up, logFC(26M/2M)=4.030 Region-enriched R4: 4.637/0.01215 Regeneration-upregulated BL: 7.240 Regeneration-enriched BL: 7.240	HMCN2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_027872 {REF} {Length: 2869} {Pfam: von Willebrand factor type A domain [PF13519.8, score=88.9]; von Willebrand factor type A domain [PF00092.30, score=58.4]; DNA gyrase B [PF00204.27, score=20.5]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=80.9, Expect=8e-15]; ENSG00000143341, HMCN1, hemicentin 1, [Score=77.4, Expect=9e-14]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=76.3, Expect=1e-13]; ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=74.3, Expect=4e-13]; ENSMUSG00000007030, Vwa7, von Willebrand factor A domain containing 7, [Score=73.6, Expect=7e-13]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=88.2, Expect=1e-17]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=80.9, Expect=2e-15]} {RNA1509_6403} {RNA1310_5647.1} {RNA815_1802.1} Mlig455_027873 {REF} {Length: 3896} {Pfam: von Willebrand factor type A domain [PF13519.8, score=88.9]; von Willebrand factor type A domain [PF00092.30, score=58.4]; DNA gyrase B [PF00204.27, score=20.5]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=80.9, Expect=8e-15]; ENSG00000143341, HMCN1, hemicentin 1, [Score=77.4, Expect=9e-14]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=76.3, Expect=1e-13]; ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=74.3, Expect=4e-13]; ENSMUSG00000007030, Vwa7, von Willebrand factor A domain containing 7, [Score=73.6, Expect=7e-13]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=88.2, Expect=1e-17]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=80.9, Expect=2e-15]} {RNA1509_30517, RNA1509_6403} {RNA1310_5647.1, RNA1509_30517, RNA1509_6403} {RNA1509_30517, RNA1509_6403, RNA815_1802.1}
2.	MligTC455_03762	6136	127.84	Mlig455_036177	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.273	CKB	1.761	-	-	0.795	0.966	-	-	Mlig455_036177 {REF} {Length: 7223} {Pfam: ATP:guanido phosphotransferase, C-terminal catalytic domain [PF00217.21, score=1066.2]; ATP:guanido phosphotransferase, N-terminal domain [PF02807.17, score=399.5]; flt3 ligand [PF02947.16, score=36.8]; Nematode polyprotein allergen ABA-1 [PF16469.7, score=31.3]; Domain of unknown function (DUF4581) [PF15167.8, score=25.5]; Latarcin precursor [PF10279.11, score=23.5]; Sir4 SID domain [PF16991.7, score=23.3]; SF-assemblin/beta giardin [PF06705.13, score=22.4]; Small, acid-soluble spore protein I [PF14098.8, score=22.3]; Plectin repeat [PF00681.22, score=21.8]; Ribonuclease toxin, BrnT, of type II toxin-antitoxin system [PF04365.15, score=21.8]; Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) [PF09602.12, score=19.0]} {Human: ENSG00000166165, CKB, creatine kinase B, [RH, Score=296, Expect=3e-89]} {Mouse: ENSMUSG00000001270, Ckb, creatine kinase, brain, [RH, Score=292, Expect=6e-88]; ENSMUSG00000030399, Ckm, creatine kinase, muscle, [RH, Score=286, Expect=9e-86]} {Dmel: FBgn0000116, Argk, Arginine kinase, [RH, Score=550, Expect=1e-180]} {Celegans: WBGene00018519, F46H5.3, Probable arginine kinase F46H5.3, [RH, Score=473, Expect=7e-154]} {Smed: dd_Smed_v6_67158_0_1, dd_Smed_v6_67158_0_1, [RH, Score=252, Expect=7e-76]} {RNA1509_1711} {RNA1310_13046} {RNA815_1372.1}
3.	MligTC455_48050	2232	46.51	Mlig455_010555	Neo: - Age: logFC(26M/2M)=-0.254 Region-specific R2: 1.866 Region-enriched R2: 1.359/0.00112		0.959	-	-	-	0.959	-	-	Mlig455_010555 {REF} {Length: 1509} {RNA1509_46129, RNA1509_6507} {RNA1310_26163, RNA1509_46129, RNA1509_6507} {RNA1509_46129, RNA1509_6507, RNA815_24113}
4.	MligTC455_48622	901	18.77	Mlig455_009572	Neo: - Age: Up-Down-Up Regeneration-downregulated BL: -2.932 Regeneration-depleted BL: -2.932		0.959	-	-	-	0.959	-	-	Mlig455_009572 {REF} {Length: 969} {NoTransDecoderORF} {RNA1509_48527} {RNA1310_11094} {RNA815_18039.1}
5.	MligTC455_52048	1282	26.72	Mlig455_019679	Neo: - Age: logFC(26M/2M)=-0.701		0.954	-	-	-	0.954	-	-	Mlig455_019679 {REF} {Length: 2281} {Pfam: D-arabinono-1,4-lactone oxidase [PF04030.16, score=40.8]; FAD binding domain [PF01565.25, score=27.1]} {Mouse: ENSMUSG00000034450, Gulo, gulonolactone (L-) oxidase, [Score=55.1, Expect=1e-07]} {Smed: dd_Smed_v6_10292_0_1, dd_Smed_v6_10292_0_1, [Score=127, Expect=4e-31]} {RNA1509_25376, RNA1509_2896} {RNA1310_10814, RNA1509_25376} {RNA1509_25376, RNA815_3783}
6.	MligTC455_39070	4952	103.18	Mlig455_003485	Neo: - Age: logFC(26M/2M)=-0.261 Region-specific R2: 1.981 Region-enriched R2: 1.624/0.00042	GSTP1	0.95	-	-	-	0.950	-	-	Mlig455_003485 {REF} {Length: 1030} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=56.0]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=36.1]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=34.1]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=29.3]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=28.6]; Glutathione S-transferase N-terminal domain [PF17172.6, score=19.8]} {Human: ENSG00000084207, GSTP1, glutathione S-transferase pi 1, [Score=129, Expect=6e-37]} {Mouse: ENSMUSG00000060803, Gstp1, glutathione S-transferase, pi 1, [Score=137, Expect=2e-40]; ENSMUSG00000097830, Gstp1, glutathione S-transferase, pi 1, [Score=137, Expect=2e-40]; ENSMUSG00000038155, Gstp2, glutathione S-transferase, pi 2, [Score=134, Expect=5e-39]; ENSMUSG00000097808, Gstp2, glutathione S-transferase, pi 2, [Score=134, Expect=5e-39]} {Dmel: FBgn0010226, GstS1, Glutathione S transferase S1, [Score=84.0, Expect=2e-19]} {Celegans: WBGene00001773, gst-25, Glutathione S-Transferase, [RH, Score=139, Expect=2e-41]} {Smed: dd_Smed_v6_20_0_1, dd_Smed_v6_20_0_1, [Score=80.1, Expect=1e-18]} {RNA1509_20047, RNA1509_24823, RNA1509_26812, RNA1509_33293, RNA1509_33394, RNA1509_6039} {RNA1310_29579.1, RNA1509_20047, RNA1509_24823, RNA1509_26812, RNA1509_33293, RNA1509_33394, RNA1509_6039} {RNA1509_20047, RNA1509_24823, RNA1509_26812, RNA1509_33293, RNA1509_33394, RNA1509_6039, RNA815_15364.1}