Data search
Results for MligTC455_16453
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16453 | 78 | 1.63 | Mlig455_040213 | Neo: - Age: Up-Down-Down |
Mlig455_040213 {REF} {Length: 1042} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_4654} {RNA1310_2688} {RNA815_3339.1} |
Cumulative graph for MligTC455_16453
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.425 | 1.578 | 0.99978 | 1.00000 | |
| RegionR2 | 3.104 | 1.578 | 0.08779 | 0.36400 | |
| RegionR3 | 0.199 | 1.578 | 0.83793 | 1.00000 | |
| RegionR4 | -0.282 | 1.578 | 0.85113 | 1.00000 | |
| RegionR5 | 1.973 | 1.578 | 0.14728 | 0.39812 | |
| RegionR6 | 2.299 | 1.578 | 0.16028 | 0.71277 | |
| RegionR7 | 2.116 | 1.578 | 0.24989 | 0.87612 | |
| RegionR8 | -2.984 | 1.578 | 0.99964 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.386 | 1.578 | 0.99990 | 1.00000 | |
| RegenerationR2 | 1.624 | 1.578 | 0.13169 | 0.55760 | |
| RegenerationR3 | 4.411 | 1.578 | 0.00222 | 0.08120 | |
| RegenerationR4 | 4.186 | 1.578 | 0.00118 | 0.03959 | |
| RegenerationR5 | 2.707 | 1.578 | 0.00952 | 0.17457 | |
| RegenerationR6 | 3.155 | 1.578 | 0.00903 | 0.11670 | |
| RegenerationBL | 3.811 | 1.578 | 0.01834 | 0.14546 | |
| RegenerationTP | 5.034 | 1.578 | 0.00682 | 0.13922 |
Genes with expression patterns similar to MligTC455_16453
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16453 | 78 | 1.63 | Mlig455_040213 | Neo: - Age: Up-Down-Down |
3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_040213 {REF} {Length: 1042} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_4654} {RNA1310_2688} {RNA815_3339.1} | |
| 2. | MligTC455_24637 | 9911 | 206.49 | Mlig455_010316 | Neo: - Age: - |
TMED9 | 0.976 | - | - | - | 0.976 | - | - | Mlig455_010316 {REF} {Length: 1902} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=186.3]} {Human: ENSG00000184840, TMED9, transmembrane p24 trafficking protein 9, [RH, Score=305, Expect=2e-105]; ENSG00000158604, TMED4, transmembrane p24 trafficking protein 4, [RH, Score=304, Expect=2e-105]} {Mouse: ENSMUSG00000004394, Tmed4, transmembrane p24 trafficking protein 4, [RH, Score=304, Expect=1e-105]; ENSMUSG00000058569, Tmed9, transmembrane p24 trafficking protein 9, [RH, Score=299, Expect=2e-103]} {Dmel: FBgn0069242, eca, eclair, [RH, Score=306, Expect=9e-107]} {Celegans: WBGene00013360, Y60A3A.9, [RH, Score=281, Expect=4e-97]} {Smed: dd_Smed_v6_1023_0_1, dd_Smed_v6_1023_0_1, [RH, Score=306, Expect=1e-106]} {RNA1509_13833, RNA1509_1976, RNA1509_9342, RNA1509_947} {RNA1310_22464, RNA1509_13833, RNA1509_1976, RNA1509_9342, RNA1509_947} {RNA1509_13833, RNA1509_1976, RNA1509_9342, RNA1509_947, RNA815_9086} |
| 3. | MligTC455_24638 | 10038 | 209.12 | Mlig455_065643 | Neo: - |
TMED9 | 0.974 | - | - | - | 0.974 | - | - | Mlig455_065643 {REF} {Length: 1570} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=186.2]} {Human: ENSG00000184840, TMED9, transmembrane p24 trafficking protein 9, [RH, Score=304, Expect=3e-105]; ENSG00000158604, TMED4, transmembrane p24 trafficking protein 4, [RH, Score=303, Expect=5e-105]} {Mouse: ENSMUSG00000004394, Tmed4, transmembrane p24 trafficking protein 4, [RH, Score=303, Expect=2e-105]; ENSMUSG00000058569, Tmed9, transmembrane p24 trafficking protein 9, [RH, Score=298, Expect=4e-103]} {Dmel: FBgn0069242, eca, eclair, [RH, Score=306, Expect=1e-106]} {Celegans: WBGene00013360, Y60A3A.9, [RH, Score=281, Expect=4e-97]} {Smed: dd_Smed_v6_1023_0_1, dd_Smed_v6_1023_0_1, [RH, Score=305, Expect=1e-106]} {RNA1509_947} {RNA1310_22464} {RNA815_9086} |
| 4. | MligTC455_36821 | 1027 | 21.4 | Mlig455_008957 | Neo: - Age: - Region-specific R7: 5.443 Region-enriched R7: 4.993/0.00000 |
0.971 | - | - | - | 0.971 | - | - | Mlig455_008957 {REF} {Length: 1684} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=129.1]} {Dmel: FBgn0034583, CG10527, [Score=101, Expect=3e-26]} {Smed: dd_Smed_v6_1040_0_1, dd_Smed_v6_1040_0_1, [RH, Score=148, Expect=3e-46]} {RNA1509_38235} {RNA1310_26456.1} {RNA815_25480} | |
| 5. | MligTC455_25518 | 556 | 11.59 | Mlig455_012208, Mlig455_069067 | Neo: - Age: - |
0.964 | - | - | - | 0.964 | - | - | Mlig455_012208 {REF} {Length: 1424} {Pfam: Herpesvirus tegument protein, N-terminal conserved region [PF04843.14, score=44.2]} {RNA1509_57333} {RNA1310_13591} {RNA815_3722} Mlig455_069067 {REF} {Length: 2271} {TRANSSPLICED} {Pfam: Herpesvirus tegument protein, N-terminal conserved region [PF04843.14, score=44.2]} {RNA1509_20467, RNA1509_57333} {RNA1310_13591, RNA1509_20467, RNA1509_57333} {RNA1509_20467, RNA1509_57333, RNA815_3722} |
|
| 6. | MligTC455_22230 | 170 | 3.54 | Mlig455_013703, Mlig455_013720 | Neo: - Age: Down-Up-Down Region-enriched R8: 5.137/0.00004 |
0.961 | - | - | - | 0.961 | - | - | Mlig455_013703 {REF} {Length: 2025} {RNA1509_49155} {RNA1310_23836, RNA1509_49155} {RNA1509_49155, RNA815_28676} Mlig455_013720 {REF} {Length: 2031} {RNA1509_49155} {RNA1310_23836} {RNA815_28676} |
|
| 7. | MligTC455_19473 | 281 | 5.84 | Mlig455_054301 | Neo: - Age: - Region-enriched R7: 3.456/0.00000 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_054301 {REF} {Length: 1587} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.4]} {RNA1310_40703} {RNA815_56404} | |
| 8. | MligTC455_35644 | 2707 | 56.4 | Mlig455_027312 | Neo: - Age: logFC(26M/2M)=0.298 |
CALR | 0.952 | - | - | - | 0.952 | - | - | Mlig455_027312 {REF} {Length: 2439} {Pfam: Calreticulin family [PF00262.20, score=288.0]} {Human: ENSG00000179218, CALR, calreticulin, [RH, Score=498, Expect=5e-176]} {Mouse: ENSMUSG00000003814, Calr, calreticulin, [RH, Score=498, Expect=6e-176]} {Dmel: FBgn0005585, Calr, Calreticulin, [RH, Score=499, Expect=1e-176]} {Celegans: WBGene00000802, crt-1, Calreticulin, [RH, Score=468, Expect=7e-165]} {Smed: dd_Smed_v6_220_0_4, dd_Smed_v6_220_0_4, [RH, Score=558, Expect=0.0]} {RNA1509_19467, RNA1509_25527, RNA1509_27326, RNA1509_4211} {RNA1310_10824.1, RNA1509_19467, RNA1509_25527, RNA1509_27326, RNA1509_4211} {RNA1509_19467, RNA1509_25527, RNA1509_27326, RNA1509_4211, RNA815_3782.1} |
| 9. | MligTC455_09240 | 297 | 6.19 | Mlig455_023411 | Neo: - Age: Down-Up-Down Region-enriched R7: 5.816/0.00000 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_023411 {REF} {Length: 2218} {RNA1509_41055} {RNA1310_11481.1} {RNA815_19026} | |
| 10. | MligTC455_19295 | 129 | 2.69 | Mlig455_044440 | Neo: - Age: - |
CLEC6A | 0.95 | - | - | - | 0.950 | - | - | Mlig455_044440 {REF} {Length: 1377} {Human: ENSG00000205846, CLEC6A, C-type lectin domain containing 6A, [Score=50.1, Expect=7e-07]} {RNA1310_49243} {RNA815_28288} |
Berezikov Lab - 2020-2021 © ERIBA