TomoSeq data search

Data search

Results for MligTC455_16573

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16573

16

0.32

Mlig455_069203

Neo: -

Age: -

Mlig455_069203 {REF} {Length: 1678} {NoTransDecoderORF} {RNA1509_48793} {RNA1310_73626} {RNA815_9578.1}

Cumulative graph for MligTC455_16573

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.73	0.705	0.99967	1.00000
RegionR2	0.285	0.705	0.99956	1.00000
RegionR3	-1.274	0.705	0.94810	1.00000
RegionR4	-1.096	0.705	0.97423	1.00000
RegionR5	1.542	0.705	0.24640	0.56031
RegionR6	-1.151	0.705	0.92057	1.00000
RegionR7	0.47	0.705	0.99964	1.00000
RegionR8	0.494	0.705	0.99955	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.646	0.705	0.99991	1.00000
RegenerationR2	1.442	0.705	0.28713	0.72984
RegenerationR3	1.521	0.705	0.45206	0.83282
RegenerationR4	2.801	0.705	0.25957	0.70778
RegenerationR5	-0.825	0.705	0.85502	1.00000
RegenerationR6	2.417	0.705	0.37485	0.71704
RegenerationBL	-1.117	0.705	0.99982	1.00000
RegenerationTP	3.277	0.705	0.30458	0.74999

Genes with expression patterns similar to MligTC455_16573

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16573	16	0.32	Mlig455_069203	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_069203 {REF} {Length: 1678} {NoTransDecoderORF} {RNA1509_48793} {RNA1310_73626} {RNA815_9578.1}
2.	MligTC455_21531	158	3.3	Mlig455_007800	Neo: Int S/G2/M Age: -	FRA10AC1	0.98	-	-	-	-	0.980	-	Mlig455_007800 {REF} {Length: 5082} {TRANSSPLICED} {Pfam: Folate-sensitive fragile site protein Fra10Ac1 [PF09725.11, score=160.2]; Zinc finger, C2H2 type [PF00096.28, score=41.2]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=31.3]; C2H2-type zinc finger [PF13894.8, score=28.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=26.7]} {Human: ENSG00000148690, FRA10AC1, FRA10A associated CGG repeat 1, [RH, Score=236, Expect=5e-69]} {Mouse: ENSMUSG00000054237, Fra10ac1, FRA10AC1 homolog (human), [RH, Score=238, Expect=1e-69]} {Dmel: FBgn0028932, CG16890, [RH, Score=177, Expect=1e-49]} {Celegans: WBGene00086566, C08H9.16, [RH, Score=188, Expect=8e-53]} {Smed: dd_Smed_v6_7308_0_1, dd_Smed_v6_7308_0_1, [RH, Score=178, Expect=1e-48]} {RNA1509_15205} {RNA1310_1734} {RNA815_11678}
3.	MligTC455_17306	46	0.96	Mlig455_048362	Neo: - Age: -		0.975	-	-	-	-	-	0.975	Mlig455_048362 {REF} {Length: 1018} {RNA1509_31170} {RNA1310_11842} {RNA815_2791.1}
4.	MligTC455_14406	103	2.15	Mlig455_002589	Neo: Irradiation Age: Up-Down-Down		0.972	-	-	-	-	0.972	-	Mlig455_002589 {REF} {Length: 1277} {NoTransDecoderORF} {RNA1509_10088, RNA1509_30779, RNA1509_49666} {RNA1310_40837, RNA1509_10088, RNA1509_30779, RNA1509_49666} {RNA1509_10088, RNA1509_30779, RNA1509_49666, RNA815_26697}
5.	MligTC455_06543	11	0.23	Mlig455_047198, Mlig455_048479	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_047198 {REF} {Length: 714} Mlig455_048479 {REF} {Length: 720}
6.	MligTC455_45209	19	0.4	Mlig455_032065, Mlig455_070297	Neo: Irradiation Age: Up-Down-Down		0.966	-	-	-	-	-	0.966	Mlig455_032065 {REF} {Length: 300} {NoTransDecoderORF} {RNA1509_40831} {RNA1310_24699} {RNA815_11839} Mlig455_070297 {REF} {Length: 1909} {Pfam: MerR HTH family regulatory protein [PF13591.8, score=22.0]} {RNA1509_40831} {RNA1310_3497.1} {RNA815_11839}
7.	MligTC455_33443	29	0.61	Mlig455_018241, Mlig455_020027, Mlig455_052956	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_018241 {REF} {Length: 1058} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804} Mlig455_020027 {REF} {Length: 1060} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804} Mlig455_052956 {REF} {Length: 1058} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=39.5]} {RNA1310_51804}
8.	MligTC455_28222	113	2.35	Mlig455_042570, Mlig455_043976	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_042570 {REF} {Length: 73} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45043} {RNA1310_96565} {RNA815_42314} Mlig455_043976 {REF} {Length: 210} {NoTransDecoderORF} {RNA1509_45043} {RNA1310_78128} {RNA815_12631}
9.	MligTC455_08859	20	0.41	Mlig455_041050	Neo: - Age: Up-Down-Down	SCNN1G	0.95	-	-	-	-	-	0.950	Mlig455_041050 {REF} {Length: 3344} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=209.1]} {Human: ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=58.2, Expect=4e-08]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=63.2, Expect=7e-10]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=92.8, Expect=3e-19]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [RH, Score=375, Expect=2e-121]} {RNA1310_12006} {RNA815_49499}
10.	MligTC455_44135	20	0.41	Mlig455_040240	Neo: - Age: -	GLRA3	0.95	-	-	-	-	-	0.950	Mlig455_040240 {REF} {Length: 3041} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=152.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=112.4]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=322, Expect=4e-105]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=316, Expect=3e-103]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=314, Expect=2e-102]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=322, Expect=2e-105]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=315, Expect=4e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=307, Expect=9e-100]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=306, Expect=3e-99]} {Dmel: FBgn0024963, GluClalpha, [Score=295, Expect=4e-95]} {Celegans: WBGene00001586, ggr-1, Glycine receptor subunit beta-type 4, [RH, Score=258, Expect=7e-81]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [Score=263, Expect=2e-83]} {RNA1310_26099} {RNA815_23562}

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