TomoSeq data search

Data search

Results for MligTC455_16574

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16574	98	2.05	Mlig455_005804, Mlig455_059404	Neo: - Age: -		Mlig455_005804 {REF} {Length: 2046} {TRANSSPLICED} {RNA1509_56064} {RNA1310_27244, RNA1509_56064} {RNA1509_56064, RNA815_26294} Mlig455_059404 {REF} {Length: 1842} {TRANSSPLICED} {RNA1509_56064} {RNA1310_27244} {RNA815_19749}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_16574

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.724	2.133	0.21390	0.85499
RegionR2	1.344	2.133	0.28856	0.67673
RegionR3	0.254	2.133	0.75984	1.00000
RegionR4	-0.095	2.133	0.88772	1.00000
RegionR5	1.975	2.133	0.01041	0.05945
RegionR6	1.892	2.133	0.03914	0.37131
RegionR7	0.567	2.133	0.67061	1.00000
RegionR8	-0.212	2.133	0.92495	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.891	2.133	0.99989	1.00000
RegenerationR2	1.293	2.133	0.07445	0.44125
RegenerationR3	0.957	2.133	0.27585	0.70982
RegenerationR4	1.259	2.133	0.11705	0.52224
RegenerationR5	0.525	2.133	0.37013	0.78008
RegenerationR6	-0.219	2.133	0.79871	0.97631
RegenerationBL	-3.808	2.133	0.15268	0.46728
RegenerationTP	2.026	2.133	0.11353	0.51697

Genes with expression patterns similar to MligTC455_16574

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16574	98	2.05	Mlig455_005804, Mlig455_059404	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005804 {REF} {Length: 2046} {TRANSSPLICED} {RNA1509_56064} {RNA1310_27244, RNA1509_56064} {RNA1509_56064, RNA815_26294} Mlig455_059404 {REF} {Length: 1842} {TRANSSPLICED} {RNA1509_56064} {RNA1310_27244} {RNA815_19749}
2.	MligTC455_41610	149	3.1	Mlig455_005689	Neo: - Age: Down-Down-Down		0.959	-	-	-	-	-	0.959	Mlig455_005689 {REF} {Length: 1271} {Smed: dd_Smed_v6_12396_0_1, dd_Smed_v6_12396_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_26983, RNA1509_29260} {RNA1310_55944, RNA1509_26983} {RNA1509_26983, RNA815_3780.1}
3.	MligTC455_40238	421	8.78	Mlig455_060872	Neo: Germline Age: Up-Down-Down Region-specific R4: 3.312 Region-enriched R4: 2.313/0.00220 Region-enriched R5: 1.641/0.03972	ITFG1	0.95	-	-	-	-	-	0.950	Mlig455_060872 {REF} {Length: 2736} {TRANSSPLICED} {Pfam: FG-GAP-like repeat [PF13517.8, score=58.6]; FG-GAP repeat [PF01839.25, score=26.6]} {Human: ENSG00000129636, ITFG1, integrin alpha FG-GAP repeat containing 1, [Score=102, Expect=5e-22]} {Mouse: ENSMUSG00000031703, Itfg1, integrin alpha FG-GAP repeat containing 1, [Score=99.8, Expect=2e-21]} {Dmel: FBgn0036509, CG7739, [Score=67.4, Expect=3e-11]} {Celegans: WBGene00014023, lnkn-1, [Score=89.0, Expect=3e-18]} {Smed: dd_Smed_v6_3036_0_1, dd_Smed_v6_3036_0_1, [Score=87.4, Expect=8e-18]} {RNA1509_20761, RNA1509_43054} {RNA1310_6703.1, RNA1509_20761, RNA1509_43054} {RNA1509_20761, RNA1509_43054, RNA815_2149}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_16574

2.05

Mlig455_005804, Mlig455_059404

Neo: -

Age: -

1.000

Mlig455_005804 {REF} {Length: 2046} {TRANSSPLICED} {RNA1509_56064} {RNA1310_27244, RNA1509_56064} {RNA1509_56064, RNA815_26294}

Mlig455_059404 {REF} {Length: 1842} {TRANSSPLICED} {RNA1509_56064} {RNA1310_27244} {RNA815_19749}

MligTC455_41610

149

3.1

Mlig455_005689

Neo: -

Age: Down-Down-Down

0.959

Mlig455_005689 {REF} {Length: 1271} {Smed: dd_Smed_v6_12396_0_1, dd_Smed_v6_12396_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_26983, RNA1509_29260} {RNA1310_55944, RNA1509_26983} {RNA1509_26983, RNA815_3780.1}

MligTC455_40238

421

8.78

Mlig455_060872

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 3.312

Region-enriched R4: 2.313/0.00220
Region-enriched R5: 1.641/0.03972

ITFG1

0.95

0.950

Mlig455_060872 {REF} {Length: 2736} {TRANSSPLICED} {Pfam: FG-GAP-like repeat [PF13517.8, score=58.6]; FG-GAP repeat [PF01839.25, score=26.6]} {Human: ENSG00000129636, ITFG1, integrin alpha FG-GAP repeat containing 1, [Score=102, Expect=5e-22]} {Mouse: ENSMUSG00000031703, Itfg1, integrin alpha FG-GAP repeat containing 1, [Score=99.8, Expect=2e-21]} {Dmel: FBgn0036509, CG7739, [Score=67.4, Expect=3e-11]} {Celegans: WBGene00014023, lnkn-1, [Score=89.0, Expect=3e-18]} {Smed: dd_Smed_v6_3036_0_1, dd_Smed_v6_3036_0_1, [Score=87.4, Expect=8e-18]} {RNA1509_20761, RNA1509_43054} {RNA1310_6703.1, RNA1509_20761, RNA1509_43054} {RNA1509_20761, RNA1509_43054, RNA815_2149}