TomoSeq data search

Data search

Results for MligTC455_16600

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16600	42	0.88	Mlig455_047683	Neo: - Age: -	AMDHD1	Mlig455_047683 {REF} {Length: 2926} {TRANSSPLICED} {Pfam: Amidohydrolase family [PF01979.22, score=75.6]; Amidohydrolase family [PF07969.13, score=72.7]} {Human: ENSG00000139344, AMDHD1, amidohydrolase domain containing 1, [RH, Score=344, Expect=9e-115]} {Mouse: ENSMUSG00000015890, Amdhd1, amidohydrolase domain containing 1, [RH, Score=347, Expect=3e-116]} {Celegans: WBGene00020436, T12A2.1, [RH, Score=335, Expect=1e-111]} {Smed: dd_Smed_v6_5220_0_1, dd_Smed_v6_5220_0_1, [RH, Score=333, Expect=4e-111]} {RNA1509_55526} {RNA1310_32404, RNA1509_55526} {RNA1509_55526, RNA815_42183}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16600

0.88

Mlig455_047683

Neo: -

Age: -

AMDHD1

Mlig455_047683 {REF} {Length: 2926} {TRANSSPLICED} {Pfam: Amidohydrolase family [PF01979.22, score=75.6]; Amidohydrolase family [PF07969.13, score=72.7]} {Human: ENSG00000139344, AMDHD1, amidohydrolase domain containing 1, [RH, Score=344, Expect=9e-115]} {Mouse: ENSMUSG00000015890, Amdhd1, amidohydrolase domain containing 1, [RH, Score=347, Expect=3e-116]} {Celegans: WBGene00020436, T12A2.1, [RH, Score=335, Expect=1e-111]} {Smed: dd_Smed_v6_5220_0_1, dd_Smed_v6_5220_0_1, [RH, Score=333, Expect=4e-111]} {RNA1509_55526} {RNA1310_32404, RNA1509_55526} {RNA1509_55526, RNA815_42183}

Cumulative graph for MligTC455_16600

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.141	1.305	0.37563	1.00000
RegionR2	1.672	1.305	0.31951	0.71097
RegionR3	1.869	1.305	0.11623	0.59217
RegionR4	-0.485	1.305	0.84387	1.00000
RegionR5	-0.832	1.305	0.92935	1.00000
RegionR6	0.467	1.305	0.61956	1.00000
RegionR7	-2.362	1.305	0.99970	1.00000
RegionR8	-2.47	1.305	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.962	1.305	0.80628	1.00000
RegenerationR2	0.985	1.305	0.47969	0.86327
RegenerationR3	1.314	1.305	0.20850	0.64402
RegenerationR4	0.596	1.305	0.62131	0.92118
RegenerationR5	1.22	1.305	0.22622	0.66007
RegenerationR6	1.283	1.305	0.31376	0.66140
RegenerationBL	4.368	1.305	0.04644	0.24670
RegenerationTP	1.077	1.305	0.99988	1.00000

Genes with expression patterns similar to MligTC455_16600

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16600	42	0.88	Mlig455_047683	Neo: - Age: -	AMDHD1	4	1.000	1.000	-	-	1.000	1.000	Mlig455_047683 {REF} {Length: 2926} {TRANSSPLICED} {Pfam: Amidohydrolase family [PF01979.22, score=75.6]; Amidohydrolase family [PF07969.13, score=72.7]} {Human: ENSG00000139344, AMDHD1, amidohydrolase domain containing 1, [RH, Score=344, Expect=9e-115]} {Mouse: ENSMUSG00000015890, Amdhd1, amidohydrolase domain containing 1, [RH, Score=347, Expect=3e-116]} {Celegans: WBGene00020436, T12A2.1, [RH, Score=335, Expect=1e-111]} {Smed: dd_Smed_v6_5220_0_1, dd_Smed_v6_5220_0_1, [RH, Score=333, Expect=4e-111]} {RNA1509_55526} {RNA1310_32404, RNA1509_55526} {RNA1509_55526, RNA815_42183}
2.	MligTC455_23048	39	0.81	Mlig455_057935, Mlig455_070733	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.543	SGSM1	0.971	-	-	-	-	-	0.971	Mlig455_057935 {REF} {Length: 4312} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=82.6]; RUN domain [PF02759.21, score=76.3]; Rab-binding domain (RBD) [PF12068.10, score=76.0]} {Human: ENSG00000167037, SGSM1, small G protein signaling modulator 1, [RH, Score=372, Expect=6e-110]} {Mouse: ENSMUSG00000042216, Sgsm1, small G protein signaling modulator 1, [RH, Score=369, Expect=4e-113]} {Dmel: FBgn0031116, CG1695, [Score=383, Expect=8e-114]} {Celegans: WBGene00008018, tbc-8, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=221, Expect=2e-59]} {Smed: dd_Smed_v6_12130_0_1, dd_Smed_v6_12130_0_1, [Score=479, Expect=3e-150]} {RNA1310_35495.2} {RNA815_26008} Mlig455_070733 {REF} {Length: 1948} {Pfam: Rab-binding domain (RBD) [PF12068.10, score=56.3]} {Human: ENSG00000167037, SGSM1, small G protein signaling modulator 1, [Score=204, Expect=7e-55]} {Mouse: ENSMUSG00000042216, Sgsm1, small G protein signaling modulator 1, [Score=201, Expect=1e-55]} {Dmel: FBgn0031116, CG1695, [Score=200, Expect=5e-54]} {Celegans: WBGene00008018, tbc-8, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=115, Expect=2e-26]} {Smed: dd_Smed_v6_3307_0_1, dd_Smed_v6_3307_0_1, [Score=188, Expect=3e-50]} {RNA1310_49577} {RNA815_26008}
3.	MligTC455_23046	38	0.8	Mlig455_070735	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_070735 {REF} {Length: 573} {NoTransDecoderORF} {RNA1310_101740}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_16600

0.88

Mlig455_047683

Neo: -

Age: -

AMDHD1

1.000

MligTC455_23048

0.81

Mlig455_057935, Mlig455_070733

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.543

SGSM1

0.971

Mlig455_057935 {REF} {Length: 4312} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=82.6]; RUN domain [PF02759.21, score=76.3]; Rab-binding domain (RBD) [PF12068.10, score=76.0]} {Human: ENSG00000167037, SGSM1, small G protein signaling modulator 1, [RH, Score=372, Expect=6e-110]} {Mouse: ENSMUSG00000042216, Sgsm1, small G protein signaling modulator 1, [RH, Score=369, Expect=4e-113]} {Dmel: FBgn0031116, CG1695, [Score=383, Expect=8e-114]} {Celegans: WBGene00008018, tbc-8, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=221, Expect=2e-59]} {Smed: dd_Smed_v6_12130_0_1, dd_Smed_v6_12130_0_1, [Score=479, Expect=3e-150]} {RNA1310_35495.2} {RNA815_26008}

Mlig455_070733 {REF} {Length: 1948} {Pfam: Rab-binding domain (RBD) [PF12068.10, score=56.3]} {Human: ENSG00000167037, SGSM1, small G protein signaling modulator 1, [Score=204, Expect=7e-55]} {Mouse: ENSMUSG00000042216, Sgsm1, small G protein signaling modulator 1, [Score=201, Expect=1e-55]} {Dmel: FBgn0031116, CG1695, [Score=200, Expect=5e-54]} {Celegans: WBGene00008018, tbc-8, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=115, Expect=2e-26]} {Smed: dd_Smed_v6_3307_0_1, dd_Smed_v6_3307_0_1, [Score=188, Expect=3e-50]} {RNA1310_49577} {RNA815_26008}

MligTC455_23046

0.8

Mlig455_070735

Neo: -

Age: -

0.955

Mlig455_070735 {REF} {Length: 573} {NoTransDecoderORF} {RNA1310_101740}