TomoSeq data search

Data search

Results for MligTC455_16713

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16713	313	6.52	Mlig455_005336, Mlig455_018179	Neo: - Age: -	TGFBRAP1	Mlig455_005336 {REF} {Length: 702} {RNA1310_60077} {RNA815_32087} Mlig455_018179 {REF} {Length: 3811} {Pfam: CNH domain [PF00780.24, score=53.9]; Vacuolar sorting protein 39 domain 2 [PF10367.11, score=44.1]; Vacuolar sorting protein 39 domain 1 [PF10366.11, score=19.9]} {Human: ENSG00000135966, TGFBRAP1, transforming growth factor beta receptor associated protein 1, [RH, Score=294, Expect=2e-85]} {Mouse: ENSMUSG00000070939, Tgfbrap1, transforming growth factor, beta receptor associated protein 1, [RH, Score=284, Expect=5e-82]} {Smed: dd_Smed_v6_4527_0_1, dd_Smed_v6_4527_0_1, [RH, Score=141, Expect=3e-34]} {RNA1509_20570, RNA1509_56598} {RNA1310_3209.1, RNA1509_20570, RNA1509_56598} {RNA1509_20570, RNA1509_56598, RNA815_1402}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16713

313

6.52

Mlig455_005336, Mlig455_018179

Neo: -

Age: -

TGFBRAP1

Mlig455_005336 {REF} {Length: 702} {RNA1310_60077} {RNA815_32087}

Mlig455_018179 {REF} {Length: 3811} {Pfam: CNH domain [PF00780.24, score=53.9]; Vacuolar sorting protein 39 domain 2 [PF10367.11, score=44.1]; Vacuolar sorting protein 39 domain 1 [PF10366.11, score=19.9]} {Human: ENSG00000135966, TGFBRAP1, transforming growth factor beta receptor associated protein 1, [RH, Score=294, Expect=2e-85]} {Mouse: ENSMUSG00000070939, Tgfbrap1, transforming growth factor, beta receptor associated protein 1, [RH, Score=284, Expect=5e-82]} {Smed: dd_Smed_v6_4527_0_1, dd_Smed_v6_4527_0_1, [RH, Score=141, Expect=3e-34]} {RNA1509_20570, RNA1509_56598} {RNA1310_3209.1, RNA1509_20570, RNA1509_56598} {RNA1509_20570, RNA1509_56598, RNA815_1402}

Cumulative graph for MligTC455_16713

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.37	3.118	0.34734	0.99069
RegionR2	0.615	3.118	0.29938	0.68822
RegionR3	-0.002	3.118	0.99930	1.00000
RegionR4	-0.335	3.118	0.52984	0.85397
RegionR5	0.786	3.118	0.04662	0.17840
RegionR6	0.346	3.118	0.46748	1.00000
RegionR7	0.224	3.118	0.73055	1.00000
RegionR8	-0.265	3.118	0.76352	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.834	3.118	0.30313	0.99823
RegenerationR2	-0.594	3.118	0.21046	0.65764
RegenerationR3	0.52	3.118	0.30863	0.73967
RegenerationR4	-0.15	3.118	0.77291	0.97757
RegenerationR5	-0.273	3.118	0.52923	0.87462
RegenerationR6	-0.584	3.118	0.28991	0.64015
RegenerationBL	0.154	3.118	0.82595	1.00000
RegenerationTP	-0.068	3.118	0.92956	1.00000

Genes with expression patterns similar to MligTC455_16713

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16713	313	6.52	Mlig455_005336, Mlig455_018179	Neo: - Age: -	TGFBRAP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005336 {REF} {Length: 702} {RNA1310_60077} {RNA815_32087} Mlig455_018179 {REF} {Length: 3811} {Pfam: CNH domain [PF00780.24, score=53.9]; Vacuolar sorting protein 39 domain 2 [PF10367.11, score=44.1]; Vacuolar sorting protein 39 domain 1 [PF10366.11, score=19.9]} {Human: ENSG00000135966, TGFBRAP1, transforming growth factor beta receptor associated protein 1, [RH, Score=294, Expect=2e-85]} {Mouse: ENSMUSG00000070939, Tgfbrap1, transforming growth factor, beta receptor associated protein 1, [RH, Score=284, Expect=5e-82]} {Smed: dd_Smed_v6_4527_0_1, dd_Smed_v6_4527_0_1, [RH, Score=141, Expect=3e-34]} {RNA1509_20570, RNA1509_56598} {RNA1310_3209.1, RNA1509_20570, RNA1509_56598} {RNA1509_20570, RNA1509_56598, RNA815_1402}
2.	MligTC455_07069	310	6.45	Mlig455_034219	Neo: - Age: -	SNX17	0.95	-	-	-	-	-	0.950	Mlig455_034219 {REF} {Length: 3141} {TRANSSPLICED} {Pfam: Sorting Nexin 17 FERM C-terminal domain [PF18116.3, score=87.2]; PX domain [PF00787.26, score=36.0]; Ras association (RalGDS/AF-6) domain [PF00788.25, score=19.7]} {Human: ENSG00000115234, SNX17, sorting nexin 17, [RH, Score=339, Expect=1e-111]} {Mouse: ENSMUSG00000029146, Snx17, sorting nexin 17, [RH, Score=343, Expect=2e-113]} {Dmel: FBgn0032191, CG5734, [RH, Score=222, Expect=2e-66]} {Celegans: WBGene00008927, snx-17, Sorting nexin-17 homolog, [RH, Score=182, Expect=5e-51]} {Smed: dd_Smed_v6_3103_0_1, dd_Smed_v6_3103_0_1, [RH, Score=222, Expect=4e-67]} {RNA1509_15117, RNA1509_16325, RNA1509_41462, RNA1509_43565} {RNA1310_6607, RNA1509_15117, RNA1509_16325, RNA1509_41462, RNA1509_43565} {RNA1509_15117, RNA1509_16325, RNA1509_41462, RNA1509_43565, RNA815_20615}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_16713

313

6.52

Mlig455_005336, Mlig455_018179

Neo: -

Age: -

TGFBRAP1

1.000

Mlig455_005336 {REF} {Length: 702} {RNA1310_60077} {RNA815_32087}

MligTC455_07069

310

6.45

Mlig455_034219

Neo: -

Age: -

SNX17

0.95

0.950

Mlig455_034219 {REF} {Length: 3141} {TRANSSPLICED} {Pfam: Sorting Nexin 17 FERM C-terminal domain [PF18116.3, score=87.2]; PX domain [PF00787.26, score=36.0]; Ras association (RalGDS/AF-6) domain [PF00788.25, score=19.7]} {Human: ENSG00000115234, SNX17, sorting nexin 17, [RH, Score=339, Expect=1e-111]} {Mouse: ENSMUSG00000029146, Snx17, sorting nexin 17, [RH, Score=343, Expect=2e-113]} {Dmel: FBgn0032191, CG5734, [RH, Score=222, Expect=2e-66]} {Celegans: WBGene00008927, snx-17, Sorting nexin-17 homolog, [RH, Score=182, Expect=5e-51]} {Smed: dd_Smed_v6_3103_0_1, dd_Smed_v6_3103_0_1, [RH, Score=222, Expect=4e-67]} {RNA1509_15117, RNA1509_16325, RNA1509_41462, RNA1509_43565} {RNA1310_6607, RNA1509_15117, RNA1509_16325, RNA1509_41462, RNA1509_43565} {RNA1509_15117, RNA1509_16325, RNA1509_41462, RNA1509_43565, RNA815_20615}