Data search


search
Exact
Search

Results for MligTC455_16771

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_16771 4137 86.18 Mlig455_049221

Neo: -

Age: logFC(26M/2M)=-0.246

Mlig455_049221 {REF} {Length: 1266} {Pfam: Domain of unknown function (DUF1330) [PF07045.13, score=20.4]} {Smed: dd_Smed_v6_10177_0_1, dd_Smed_v6_10177_0_1, [RH, Score=164, Expect=3e-51]} {RNA1509_15928, RNA1509_8871} {RNA1310_25557.1, RNA1509_15928, RNA1509_8871} {RNA1509_15928, RNA1509_8871, RNA815_12819.1}

Cumulative graph for MligTC455_16771

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.55 6.517 0.00053 0.07591
RegionR2 0.804 6.517 0.01126 0.10828
RegionR3 0.187 6.517 0.50784 0.99745
RegionR4 0.423 6.517 0.19837 0.47734
RegionR5 -0.228 6.517 0.42755 0.78753
RegionR6 0.202 6.517 0.47346 1.00000
RegionR7 0.808 6.517 0.00543 0.11642
RegionR8 0.354 6.517 0.30339 0.93520

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.445 6.517 0.13245 0.86593
RegenerationR2 0.053 6.517 0.86415 1.00000
RegenerationR3 0.25 6.517 0.44706 0.83056
RegenerationR4 0.148 6.517 0.65986 0.93815
RegenerationR5 0.278 6.517 0.39897 0.79854
RegenerationR6 -0.174 6.517 0.60444 0.87083
RegenerationBL -0.204 6.517 0.50841 0.87210
RegenerationTP 0.09 6.517 0.78303 1.00000


Genes with expression patterns similar to MligTC455_16771

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_16771 4137 86.18 Mlig455_049221

Neo: -

Age: logFC(26M/2M)=-0.246

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_049221 {REF} {Length: 1266} {Pfam: Domain of unknown function (DUF1330) [PF07045.13, score=20.4]} {Smed: dd_Smed_v6_10177_0_1, dd_Smed_v6_10177_0_1, [RH, Score=164, Expect=3e-51]} {RNA1509_15928, RNA1509_8871} {RNA1310_25557.1, RNA1509_15928, RNA1509_8871} {RNA1509_15928, RNA1509_8871, RNA815_12819.1}
2. MligTC455_53037 13249 276.01 Mlig455_032646

Neo: -

Age: -

4.014 0.712 0.776 0.743 - 0.822 0.961 Mlig455_032646 {REF} {Length: 968} {RNA1509_30269, RNA1509_4133, RNA1509_8761} {RNA1310_40499.1, RNA1509_30269, RNA1509_4133, RNA1509_8761} {RNA1509_30269, RNA1509_4133, RNA1509_8761, RNA815_19419.1}
3. MligTC455_19173 2419 50.39 Mlig455_042556

Neo: -

Age: -

3.251 0.751 0.703 0.953 - 0.844 - Mlig455_042556 {REF} {Length: 2405} {TRANSSPLICED} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=63.2]; Lipoma HMGIC fusion partner-like protein [PF10242.11, score=20.8]} {Dmel: FBgn0013720, pck, pickel, [Score=79.0, Expect=4e-17]} {Smed: dd_Smed_v6_2204_1_2, dd_Smed_v6_2204_1_2, [Score=168, Expect=2e-50]} {RNA1509_5823, RNA1509_6115} {RNA1310_30062, RNA1509_5823, RNA1509_6115} {RNA1509_5823, RNA1509_6115, RNA815_14070}
4. MligTC455_18603 3778 78.7 Mlig455_050242

Neo: -

Age: -

CCDC39 2.63 - 0.799 0.880 - - 0.951 Mlig455_050242 {REF} {Length: 3281} {Human: ENSG00000284862, CCDC39, coiled-coil domain containing 39, [RH, Score=698, Expect=0.0]} {Mouse: ENSMUSG00000027676, Ccdc39, coiled-coil domain containing 39, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0037276, CG17387, [RH, Score=157, Expect=4e-39]} {Smed: dd_Smed_v6_5955_0_1, dd_Smed_v6_5955_0_1, [RH, Score=779, Expect=0.0]} {RNA1509_738} {RNA1310_4021} {RNA815_1219}
5. MligTC455_41979 3503 72.98 Mlig455_022271

Neo: -

Age: logFC(26M/2M)=-0.319

2.599 - 0.864 - 0.780 - 0.955 Mlig455_022271 {REF} {Length: 3465} {Pfam: Domain of unknown function (DUF1330) [PF07045.13, score=28.5]} {Smed: dd_Smed_v6_8243_0_1, dd_Smed_v6_8243_0_1, [Score=117, Expect=5e-31]} {RNA1509_35371, RNA1509_3710, RNA1509_5489} {RNA1310_15598, RNA1509_35371, RNA1509_3710, RNA1509_5489} {RNA1509_35371, RNA1509_3710, RNA1509_5489, RNA815_10198.1}
6. MligTC455_49834 16365 340.93 Mlig455_028073, Mlig455_028136

Neo: -

Age: Down-Up-Up

CD151 2.571 - 0.828 - - 0.957 0.786

Mlig455_028073 {REF} {Length: 1464} {Pfam: Tetraspanin family [PF00335.22, score=127.9]; SUR7/PalI family [PF06687.14, score=21.4]} {Human: ENSG00000177697, CD151, CD151 molecule (Raph blood group), [Score=74.7, Expect=4e-15]; ENSG00000085117, CD82, CD82 molecule, [Score=73.2, Expect=2e-14]; ENSG00000108219, TSPAN14, tetraspanin 14, [Score=72.0, Expect=4e-14]} {Mouse: ENSMUSG00000027215, Cd82, CD82 antigen, [Score=78.2, Expect=2e-16]; ENSMUSG00000037824, Tspan14, tetraspanin 14, [Score=75.5, Expect=2e-15]} {Dmel: FBgn0035936, Tsp66E, Tetraspanin 66E, [Score=94.0, Expect=3e-22]} {Celegans: WBGene00006637, tsp-11, Tetraspanin, [RH, Score=72.8, Expect=1e-14]} {Smed: dd_Smed_v6_13639_0_1, dd_Smed_v6_13639_0_1, [Score=138, Expect=3e-39]} {RNA1509_1527, RNA1509_15663} {RNA1310_23299.2, RNA1509_15663} {RNA1509_15663, RNA815_10360.1}

Mlig455_028136 {REF} {Length: 1712} {Pfam: Tetraspanin family [PF00335.22, score=128.5]; SUR7/PalI family [PF06687.14, score=21.3]} {Human: ENSG00000177697, CD151, CD151 molecule (Raph blood group), [Score=73.9, Expect=7e-15]; ENSG00000085117, CD82, CD82 molecule, [Score=73.6, Expect=1e-14]; ENSG00000108219, TSPAN14, tetraspanin 14, [Score=72.0, Expect=5e-14]; ENSG00000048140, TSPAN17, tetraspanin 17, [Score=70.5, Expect=3e-13]} {Mouse: ENSMUSG00000027215, Cd82, CD82 antigen, [Score=78.6, Expect=1e-16]; ENSMUSG00000037824, Tspan14, tetraspanin 14, [Score=75.1, Expect=3e-15]} {Dmel: FBgn0035936, Tsp66E, Tetraspanin 66E, [Score=93.6, Expect=4e-22]} {Celegans: WBGene00006637, tsp-11, Tetraspanin, [RH, Score=72.4, Expect=1e-14]} {Smed: dd_Smed_v6_13639_0_1, dd_Smed_v6_13639_0_1, [Score=138, Expect=4e-39]} {RNA1509_1527} {RNA1310_23299.2} {RNA815_10360.1}
7. MligTC455_49835 7752 161.5 Mlig455_028272

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.837

Region-enriched R4: 1.050/0.00251

TSPAN11 2.494 - 0.827 0.710 - 0.957 - Mlig455_028272 {REF} {Length: 1870} {Pfam: Tetraspanin family [PF00335.22, score=65.9]} {Human: ENSG00000110900, TSPAN11, tetraspanin 11, [Score=46.6, Expect=4e-06]} {Mouse: ENSMUSG00000067377, Tspan6, tetraspanin 6, [Score=48.1, Expect=1e-06]; ENSMUSG00000030351, Tspan11, tetraspanin 11, [Score=45.8, Expect=8e-06]} {Dmel: FBgn0032074, Tsp29Fa, Tetraspanin 29Fa, [Score=48.1, Expect=1e-06]} {Smed: dd_Smed_v6_49093_0_1, dd_Smed_v6_49093_0_1, [Score=76.3, Expect=7e-17]} {RNA1509_1527} {RNA1310_23299.2} {RNA815_10360.1}
8. MligTC455_52289 1304 27.17 Mlig455_040536, Mlig455_062101

Neo: -

Age: -

Region-enriched R2: 2.340/0.00741

CDH23 1.754 - - - 0.787 - 0.967

Mlig455_040536 {REF} {Length: 5566} {Pfam: Cadherin domain [PF00028.19, score=482.5]; Cadherin-like [PF08266.14, score=52.6]; Cadherin-like [PF16184.7, score=49.2]; RET Cadherin like domain 1 [PF17756.3, score=29.6]; Chlamydia polymorphic membrane protein middle domain [PF07548.13, score=19.7]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=405, Expect=4e-114]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=424, Expect=3e-120]} {Dmel: FBgn0036715, Cad74A, Cadherin 74A, [RH, Score=603, Expect=0.0]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=241, Expect=9e-64]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=291, Expect=2e-79]} {RNA1509_2629, RNA1509_34857} {RNA1310_891, RNA1509_2629, RNA1509_34857} {RNA1509_2629, RNA1509_34857, RNA815_261}

Mlig455_062101 {REF} {Length: 5552} {Pfam: Cadherin domain [PF00028.19, score=474.3]; Cadherin-like [PF08266.14, score=52.6]; Cadherin-like [PF16184.7, score=50.6]; RET Cadherin like domain 1 [PF17756.3, score=28.9]; Chlamydia polymorphic membrane protein middle domain [PF07548.13, score=19.5]} {Human: ENSG00000107736, CDH23, cadherin related 23, [Score=417, Expect=4e-118]} {Mouse: ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=416, Expect=1e-117]} {Dmel: FBgn0036715, Cad74A, Cadherin 74A, [RH, Score=600, Expect=0.0]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=230, Expect=2e-60]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=286, Expect=6e-78]} {RNA1509_54845} {RNA1310_830, RNA1509_54845} {RNA1509_54845, RNA815_261}
9. MligTC455_23731 298 6.22 Mlig455_000987

Neo: -

Age: -

1.733 - - - - 0.955 0.778 Mlig455_000987 {REF} {Length: 4139} {Pfam: Integrase zinc binding domain [PF17921.3, score=65.1]; Integrase core domain [PF13683.8, score=20.3]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=90.5, Expect=1e-19]} {RNA1509_1162} {RNA1310_7259} {RNA815_206}
10. MligTC455_53672 1056 22.01 Mlig455_068606

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=-0.358

1.664 - - - - 0.957 0.707 Mlig455_068606 {REF} {Length: 1005} {Pfam: Putative Interleukin 2 receptor, gamma chain [PF15874.7, score=53.1]} {RNA1509_22649, RNA1509_40840} {RNA1310_9900, RNA1509_40840} {RNA1509_40840, RNA815_3819.1}
11. MligTC455_21380 2471 51.48 Mlig455_022113, Mlig455_053648

Neo: -

Age: logFC(26M/2M)=-0.229

0.951 - - - - - 0.951

Mlig455_022113 {REF} {Length: 7418} {TRANSSPLICED} {Pfam: Ellis van Creveld protein 2 like protein [PF12297.10, score=104.2]} {Mouse: ENSMUSG00000050248, Evc2, EvC ciliary complex subunit 2, [RH, Score=76.3, Expect=3e-13]} {Smed: dd_Smed_v6_10777_0_1, dd_Smed_v6_10777_0_1, [RH, Score=95.1, Expect=2e-19]} {RNA1509_15002, RNA1509_1729} {RNA1310_979.1, RNA1509_15002, RNA1509_1729} {RNA1509_15002, RNA1509_1729, RNA815_279}

Mlig455_053648 {REF} {Length: 6716} {TRANSSPLICED} {Pfam: Ellis van Creveld protein 2 like protein [PF12297.10, score=100.9]} {Mouse: ENSMUSG00000050248, Evc2, EvC ciliary complex subunit 2, [RH, Score=76.3, Expect=3e-13]} {Smed: dd_Smed_v6_10777_0_1, dd_Smed_v6_10777_0_1, [RH, Score=97.8, Expect=3e-20]} {RNA1509_1729} {RNA1310_979.1} {RNA815_279}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA