TomoSeq data search

Data search

Results for MligTC455_16882

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16882	403	8.39	Mlig455_003464	Neo: - Age: - Region-enriched R5: 1.712/0.04719		Mlig455_003464 {REF} {Length: 877} {TRANSSPLICED} {RNA1509_58576} {RNA1310_37787} {RNA815_19870}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_16882

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.158	3.498	0.37812	1.00000
RegionR2	0.608	3.498	0.45330	0.84071
RegionR3	0.426	3.498	0.54762	1.00000
RegionR4	0.902	3.498	0.27155	0.57731
RegionR5	1.712	3.498	0.00757	0.04719
RegionR6	1.08	3.498	0.14121	0.67391
RegionR7	0.83	3.498	0.32643	0.96119
RegionR8	-6.716	3.498	0.00636	0.14511

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.251	3.498	0.87494	1.00000
RegenerationR2	-0.216	3.498	0.73326	0.96707
RegenerationR3	0.22	3.498	0.74463	0.96223
RegenerationR4	-0.574	3.498	0.39783	0.81194
RegenerationR5	-0.59	3.498	0.33609	0.75526
RegenerationR6	-0.437	3.498	0.52831	0.82570
RegenerationBL	1.189	3.498	0.41460	0.78351
RegenerationTP	3.661	3.498	0.01879	0.23486

Genes with expression patterns similar to MligTC455_16882

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16882	403	8.39	Mlig455_003464	Neo: - Age: - Region-enriched R5: 1.712/0.04719		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_003464 {REF} {Length: 877} {TRANSSPLICED} {RNA1509_58576} {RNA1310_37787} {RNA815_19870}
2.	MligTC455_54216	954	19.88	Mlig455_065162	Neo: - Age: - Region-enriched R5: 1.339/0.00023	UGDH	0.976	-	-	-	-	-	0.976	Mlig455_065162 {REF} {Length: 2296} {TRANSSPLICED} {Pfam: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain [PF03721.16, score=189.1]; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain [PF03720.17, score=122.8]; UDP-glucose/GDP-mannose dehydrogenase family, central domain [PF00984.21, score=101.7]; Sec20 [PF03908.15, score=73.5]} {Human: ENSG00000109814, UGDH, UDP-glucose 6-dehydrogenase, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000029201, Ugdh, UDP-glucose dehydrogenase, [RH, Score=582, Expect=0.0]} {Dmel: FBgn0261445, sgl, sugarless, [RH, Score=601, Expect=0.0]} {Celegans: WBGene00005022, sqv-4, UDP-glucose 6-dehydrogenase, [RH, Score=560, Expect=0.0]} {Smed: dd_Smed_v6_10849_0_1, dd_Smed_v6_10849_0_1, [RH, Score=529, Expect=0.0]} {RNA1509_15760, RNA1509_18415, RNA1509_58661} {RNA1310_17256.1, RNA1509_15760, RNA1509_58661} {RNA1509_15760, RNA1509_58661, RNA815_6865}
3.	MligTC455_38617	213	4.44	Mlig455_035321	Neo: - Age: -	RNF40	0.95	-	-	-	-	-	0.950	Mlig455_035321 {REF} {Length: 5208} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.1]; BRE1 E3 ubiquitin ligase [PF08647.13, score=19.6]; zinc-RING finger domain [PF14634.8, score=18.6]} {Human: ENSG00000103549, RNF40, ring finger protein 40, [Score=487, Expect=4e-155]} {Mouse: ENSMUSG00000030816, Rnf40, ring finger protein 40, [RH, Score=493, Expect=1e-157]} {Dmel: FBgn0086694, Bre1, [Score=526, Expect=8e-170]} {Celegans: WBGene00007008, rfp-1, E3 ubiquitin-protein ligase bre-1, [RH, Score=149, Expect=2e-36]} {Smed: dd_Smed_v6_4070_0_1, dd_Smed_v6_4070_0_1, [RH, Score=361, Expect=4e-109]} {RNA1509_10234, RNA1509_18812} {RNA1310_3645, RNA1509_10234, RNA1509_18812} {RNA1509_10234, RNA1509_18812, RNA815_443}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_16882

403

8.39

Mlig455_003464

Neo: -

Age: -

Region-enriched R5: 1.712/0.04719

1.000

Mlig455_003464 {REF} {Length: 877} {TRANSSPLICED} {RNA1509_58576} {RNA1310_37787} {RNA815_19870}

MligTC455_54216

954

19.88

Mlig455_065162

Neo: -

Age: -

Region-enriched R5: 1.339/0.00023

UGDH

0.976

Mlig455_065162 {REF} {Length: 2296} {TRANSSPLICED} {Pfam: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain [PF03721.16, score=189.1]; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain [PF03720.17, score=122.8]; UDP-glucose/GDP-mannose dehydrogenase family, central domain [PF00984.21, score=101.7]; Sec20 [PF03908.15, score=73.5]} {Human: ENSG00000109814, UGDH, UDP-glucose 6-dehydrogenase, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000029201, Ugdh, UDP-glucose dehydrogenase, [RH, Score=582, Expect=0.0]} {Dmel: FBgn0261445, sgl, sugarless, [RH, Score=601, Expect=0.0]} {Celegans: WBGene00005022, sqv-4, UDP-glucose 6-dehydrogenase, [RH, Score=560, Expect=0.0]} {Smed: dd_Smed_v6_10849_0_1, dd_Smed_v6_10849_0_1, [RH, Score=529, Expect=0.0]} {RNA1509_15760, RNA1509_18415, RNA1509_58661} {RNA1310_17256.1, RNA1509_15760, RNA1509_58661} {RNA1509_15760, RNA1509_58661, RNA815_6865}

MligTC455_38617

213

4.44

Mlig455_035321

Neo: -

Age: -

RNF40

0.95

0.950

Mlig455_035321 {REF} {Length: 5208} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.1]; BRE1 E3 ubiquitin ligase [PF08647.13, score=19.6]; zinc-RING finger domain [PF14634.8, score=18.6]} {Human: ENSG00000103549, RNF40, ring finger protein 40, [Score=487, Expect=4e-155]} {Mouse: ENSMUSG00000030816, Rnf40, ring finger protein 40, [RH, Score=493, Expect=1e-157]} {Dmel: FBgn0086694, Bre1, [Score=526, Expect=8e-170]} {Celegans: WBGene00007008, rfp-1, E3 ubiquitin-protein ligase bre-1, [RH, Score=149, Expect=2e-36]} {Smed: dd_Smed_v6_4070_0_1, dd_Smed_v6_4070_0_1, [RH, Score=361, Expect=4e-109]} {RNA1509_10234, RNA1509_18812} {RNA1310_3645, RNA1509_10234, RNA1509_18812} {RNA1509_10234, RNA1509_18812, RNA815_443}