Data search
Results for MligTC455_16903
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16903 | 172 | 3.57 | Mlig455_042162 | Neo: - Age: Up-Down-Up |
Mlig455_042162 {REF} {Length: 1945} {RNA1509_55092} {RNA1310_20395.1, RNA1509_55092} {RNA1509_55092, RNA815_8649} |
Cumulative graph for MligTC455_16903
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.376 | 2.421 | 0.80497 | 1.00000 | |
| RegionR2 | 1.053 | 2.421 | 0.18941 | 0.54454 | |
| RegionR3 | 0.503 | 2.421 | 0.46138 | 0.97065 | |
| RegionR4 | -0.154 | 2.421 | 0.84507 | 1.00000 | |
| RegionR5 | -0.915 | 2.421 | 0.21099 | 0.50741 | |
| RegionR6 | -0.069 | 2.421 | 0.93776 | 1.00000 | |
| RegionR7 | 0.716 | 2.421 | 0.35688 | 0.99365 | |
| RegionR8 | -1.51 | 2.421 | 0.25775 | 0.87906 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.801 | 2.421 | 0.12663 | 0.85806 | |
| RegenerationR2 | -1.311 | 2.421 | 0.07446 | 0.44125 | |
| RegenerationR3 | -0.609 | 2.421 | 0.43605 | 0.82448 | |
| RegenerationR4 | -0.78 | 2.421 | 0.34227 | 0.77359 | |
| RegenerationR5 | 0.019 | 2.421 | 0.97741 | 1.00000 | |
| RegenerationR6 | -1.041 | 2.421 | 0.24195 | 0.58983 | |
| RegenerationBL | -0.571 | 2.421 | 0.59229 | 0.94179 | |
| RegenerationTP | -0.864 | 2.421 | 0.49661 | 0.89845 |
Genes with expression patterns similar to MligTC455_16903
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16903 | 172 | 3.57 | Mlig455_042162 | Neo: - Age: Up-Down-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042162 {REF} {Length: 1945} {RNA1509_55092} {RNA1310_20395.1, RNA1509_55092} {RNA1509_55092, RNA815_8649} | |
| 2. | MligTC455_42489 | 236 | 4.91 | Mlig455_046431 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.696 Region-enriched R2: 2.739/0.01786 |
1.831 | - | 0.864 | - | - | - | 0.967 | Mlig455_046431 {REF} {Length: 2159} {Smed: dd_Smed_v6_12856_0_1, dd_Smed_v6_12856_0_1, [RH, Score=107, Expect=3e-27]} {RNA1509_6433} {RNA1310_24046, RNA1509_6433} {RNA1509_6433, RNA815_8453} | |
| 3. | MligTC455_12685 | 123 | 2.56 | Mlig455_016759 | Neo: - Age: - |
CACNA1C | 0.978 | - | - | - | - | - | 0.978 | Mlig455_016759 {REF} {Length: 8335} {Pfam: Ion transport protein [PF00520.33, score=554.7]; Voltage gated calcium channel IQ domain [PF08763.13, score=101.9]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=91.1]; Polycystin cation channel [PF08016.14, score=22.2]} {Human: ENSG00000151067, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=1386, Expect=0.0]; ENSG00000285479, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=1386, Expect=0.0]; ENSG00000157388, CACNA1D, calcium voltage-gated channel subunit alpha1 D, [Score=1350, Expect=0.0]; ENSG00000081248, CACNA1S, calcium voltage-gated channel subunit alpha1 S, [Score=1324, Expect=0.0]} {Mouse: ENSMUSG00000051331, Cacna1c, calcium channel, voltage-dependent, L type, alpha 1C subunit, [Score=1393, Expect=0.0]; ENSMUSG00000015968, Cacna1d, calcium channel, voltage-dependent, L type, alpha 1D subunit, [Score=1343, Expect=0.0]} {Dmel: FBgn0001991, Ca-alpha1D, Ca[2+]-channel protein alpha[[1]] subunit D, [Score=1474, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=1386, Expect=0.0]} {Smed: dd_Smed_v6_8899_0_23, dd_Smed_v6_8899_0_23, [Score=1537, Expect=0.0]} {RNA1509_7565} {RNA1310_601} {RNA815_3074} |
| 4. | MligTC455_33334 | 85 | 1.77 | Mlig455_036915 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_036915 {REF} {Length: 1128} {Pfam: Innexin [PF00876.20, score=128.5]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=54.3, Expect=2e-08]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=110, Expect=1e-28]} {Smed: dd_Smed_v6_692_0_1, dd_Smed_v6_692_0_1, [Score=132, Expect=3e-36]} {RNA1509_36671} {RNA1310_14554} {RNA815_16494} | |
| 5. | MligTC455_41451 | 401 | 8.36 | Mlig455_058702 | Neo: - Age: - |
CBFB | 0.95 | 0.950 | - | - | - | - | - | Mlig455_058702 {REF} {Length: 1469} {Pfam: Core binding factor beta subunit [PF02312.19, score=134.9]} {Human: ENSG00000067955, CBFB, core-binding factor subunit beta, [RH, Score=99.0, Expect=2e-24]} {Mouse: ENSMUSG00000031885, Cbfb, core binding factor beta, [RH, Score=99.4, Expect=1e-24]} {Dmel: FBgn0013755, Bro, Brother, [Score=96.7, Expect=1e-23]} {Smed: dd_Smed_v6_2875_0_1, dd_Smed_v6_2875_0_1, [RH, Score=93.2, Expect=4e-23]} {RNA1310_43420} {RNA815_49748} |
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