Data search
Results for MligTC455_16937
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16937 | 779 | 16.22 | Mlig455_041102 | Neo: Int S/G2/M Age: - |
RPRD2 | Mlig455_041102 {REF} {Length: 2757} {Pfam: CID domain [PF04818.15, score=76.0]; Cell-cycle alteration and expression-elevated protein in tumour [PF16566.7, score=23.4]} {Human: ENSG00000163125, RPRD2, regulation of nuclear pre-mRNA domain containing 2, [RH, Score=142, Expect=2e-34]} {Mouse: ENSMUSG00000028106, Rprd2, regulation of nuclear pre-mRNA domain containing 2, [RH, Score=135, Expect=1e-32]} {Dmel: FBgn0032688, CG15160, [RH, Score=105, Expect=2e-23]} {Smed: dd_Smed_v6_6829_0_1, dd_Smed_v6_6829_0_1, [Score=56.2, Expect=2e-08]} {RNA1509_14100, RNA1509_16324} {RNA1310_7665.1, RNA1509_14100, RNA1509_16324} {RNA1509_14100, RNA1509_16324, RNA815_7913} |
Cumulative graph for MligTC455_16937
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.308 | 4.17 | 0.78737 | 1.00000 | |
| RegionR2 | -0.145 | 4.17 | 0.78352 | 1.00000 | |
| RegionR3 | 0.209 | 4.17 | 0.61193 | 1.00000 | |
| RegionR4 | 0.222 | 4.17 | 0.62300 | 0.93259 | |
| RegionR5 | 0.4 | 4.17 | 0.27434 | 0.60034 | |
| RegionR6 | 0.359 | 4.17 | 0.38819 | 0.96385 | |
| RegionR7 | -0.567 | 4.17 | 0.37775 | 1.00000 | |
| RegionR8 | -0.17 | 4.17 | 0.82576 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.822 | 4.17 | 0.13878 | 0.87575 | |
| RegenerationR2 | 0.749 | 4.17 | 0.07754 | 0.44985 | |
| RegenerationR3 | 0.43 | 4.17 | 0.35119 | 0.77140 | |
| RegenerationR4 | 0.432 | 4.17 | 0.33686 | 0.76990 | |
| RegenerationR5 | 0.629 | 4.17 | 0.13302 | 0.54109 | |
| RegenerationR6 | 1.362 | 4.17 | 0.00241 | 0.05558 | |
| RegenerationBL | 1.39 | 4.17 | 0.00714 | 0.08240 | |
| RegenerationTP | 0.789 | 4.17 | 0.22023 | 0.66348 |
Genes with expression patterns similar to MligTC455_16937
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16937 | 779 | 16.22 | Mlig455_041102 | Neo: Int S/G2/M Age: - |
RPRD2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_041102 {REF} {Length: 2757} {Pfam: CID domain [PF04818.15, score=76.0]; Cell-cycle alteration and expression-elevated protein in tumour [PF16566.7, score=23.4]} {Human: ENSG00000163125, RPRD2, regulation of nuclear pre-mRNA domain containing 2, [RH, Score=142, Expect=2e-34]} {Mouse: ENSMUSG00000028106, Rprd2, regulation of nuclear pre-mRNA domain containing 2, [RH, Score=135, Expect=1e-32]} {Dmel: FBgn0032688, CG15160, [RH, Score=105, Expect=2e-23]} {Smed: dd_Smed_v6_6829_0_1, dd_Smed_v6_6829_0_1, [Score=56.2, Expect=2e-08]} {RNA1509_14100, RNA1509_16324} {RNA1310_7665.1, RNA1509_14100, RNA1509_16324} {RNA1509_14100, RNA1509_16324, RNA815_7913} |
| 2. | MligTC455_34114 | 3928 | 81.84 | Mlig455_026815, Mlig455_030877 | Neo: - Age: logFC(26M/2M)=0.377 Regeneration-upregulated R6: 1.453 Regeneration-enriched R6: 1.453 |
EIF4B | 1.734 | 0.779 | - | - | - | - | 0.955 | Mlig455_026815 {REF} {Length: 3862} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=43.5]} {Human: ENSG00000063046, EIF4B, eukaryotic translation initiation factor 4B, [RH, Score=90.1, Expect=4e-18]} {Mouse: ENSMUSG00000058655, Eif4b, eukaryotic translation initiation factor 4B, [RH, Score=90.1, Expect=3e-18]} {Dmel: FBgn0020660, eIF4B, eukaryotic translation initiation factor 4B, [RH, Score=89.4, Expect=1e-18]} {Smed: dd_Smed_v6_3282_1_1, dd_Smed_v6_3282_1_1, [Score=54.3, Expect=2e-07]} {RNA1509_29122} {RNA1310_2611} {RNA815_2592.1} Mlig455_030877 {REF} {Length: 3839} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=43.7]} {Human: ENSG00000063046, EIF4B, eukaryotic translation initiation factor 4B, [RH, Score=84.3, Expect=2e-18]} {Mouse: ENSMUSG00000058655, Eif4b, eukaryotic translation initiation factor 4B, [Score=65.1, Expect=2e-10]} {Dmel: FBgn0020660, eIF4B, eukaryotic translation initiation factor 4B, [RH, Score=84.7, Expect=3e-17]} {Smed: dd_Smed_v6_3282_1_1, dd_Smed_v6_3282_1_1, [Score=56.2, Expect=4e-08]} {RNA1509_1253} {RNA1310_2611} {RNA815_2592.1} |
| 3. | MligTC455_32364 | 7013 | 146.11 | Mlig455_029729 | Neo: Germline Age: Up-Down-Up Region-enriched R6: 6.713/0.00000 |
ZAN | 1.725 | - | - | - | 0.952 | - | 0.773 | Mlig455_029729 {REF} {Length: 12468} {Pfam: ShK domain-like [PF01549.26, score=25.4]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=96.7, Expect=1e-18]; ENSG00000197558, SSPO, SCO-spondin, [Score=93.2, Expect=1e-17]} {Mouse: ENSMUSG00000047730, Fcgbp, Fc fragment of IgG binding protein, [Score=90.9, Expect=4e-17]; ENSMUSG00000079173, Zan, zonadhesin, [Score=90.9, Expect=4e-17]} {Smed: dd_Smed_v6_91_0_1, dd_Smed_v6_91_0_1, [Score=283, Expect=9e-76]} {RNA1509_38} {RNA1310_23} {RNA815_13} |
| 4. | MligTC455_35515 | 2398 | 49.95 | Mlig455_034939 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.231/0.00000 |
KARS | 1.714 | - | - | - | 0.955 | 0.759 | - | Mlig455_034939 {REF} {Length: 3649} {Pfam: tRNA synthetases class II (D, K and N) [PF00152.22, score=261.5]; OB-fold nucleic acid binding domain [PF01336.27, score=50.4]; tRNA synthetases class II core domain (F) [PF01409.22, score=34.0]} {Human: ENSG00000065427, KARS, lysyl-tRNA synthetase, [RH, Score=773, Expect=0.0]} {Mouse: ENSMUSG00000031948, Kars, lysyl-tRNA synthetase, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0027084, LysRS, Lysyl-tRNA synthetase, [RH, Score=728, Expect=0.0]} {Celegans: WBGene00002238, kars-1, Lysine--tRNA ligase, [RH, Score=726, Expect=0.0]} {Smed: dd_Smed_v6_1118_0_1, dd_Smed_v6_1118_0_1, [RH, Score=702, Expect=0.0]} {RNA1509_2595, RNA1509_46665, RNA1509_46914, RNA1509_7494} {RNA1310_12688, RNA1509_2595, RNA1509_46665, RNA1509_46914, RNA1509_7494} {RNA1509_2595, RNA1509_46665, RNA1509_46914, RNA1509_7494, RNA815_4471} |
| 5. | MligTC455_49194 | 442 | 9.22 | Mlig455_022569 | Neo: - Age: Down-Up-Down |
0.965 | - | - | - | - | - | 0.965 | Mlig455_022569 {REF} {Length: 1947} {TRANSSPLICED} {RNA1509_18442, RNA1509_34885} {RNA1310_8277, RNA1509_34885} {RNA1509_34885, RNA815_6103} | |
| 6. | MligTC455_49239 | 254 | 5.29 | Mlig455_002495 | Neo: - Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_002495 {REF} {Length: 1078} {NoTransDecoderORF} {RNA1509_1763} {RNA1310_14034.1} {RNA815_4894} | |
| 7. | MligTC455_36557 | 1200 | 25 | Mlig455_017276 | Neo: Irradiation Age: logFC(26M/2M)=-0.221 |
ZNF648 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_017276 {REF} {Length: 2845} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=75.7]; C2H2-type zinc finger [PF13894.8, score=68.7]; Zinc-finger double domain [PF13465.8, score=50.9]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=21.3]; C2H2-type zinc finger [PF13912.8, score=19.5]} {Human: ENSG00000179930, ZNF648, zinc finger protein 648, [Score=107, Expect=8e-24]; ENSG00000122386, ZNF205, zinc finger protein 205, [Score=104, Expect=4e-23]; ENSG00000196378, ZNF34, zinc finger protein 34, [Score=103, Expect=1e-22]; ENSG00000171970, ZNF57, zinc finger protein 57, [Score=102, Expect=3e-22]} {Mouse: ENSMUSG00000063281, Zfp35, zinc finger protein 35, [Score=107, Expect=6e-24]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=106, Expect=1e-23]; ENSMUSG00000074867, Zfp808, zinc finger protein 808, [Score=105, Expect=3e-23]; ENSMUSG00000062012, Zfp13, zinc finger protein 13, [Score=105, Expect=9e-24]; ENSMUSG00000006720, Zfp184, zinc finger protein 184 (Kruppel-like), [Score=104, Expect=6e-23]; ENSMUSG00000057895, Zfp105, zinc finger protein 105, [Score=103, Expect=6e-23]; ENSMUSG00000094942, Gm3604, predicted gene 3604, [Score=103, Expect=5e-23]; ENSMUSG00000028389, Zfp37, zinc finger protein 37, [Score=103, Expect=1e-22]; ENSMUSG00000020335, Zfp354b, zinc finger protein 354B, [Score=103, Expect=9e-23]; ENSMUSG00000021327, Zkscan3, zinc finger with KRAB and SCAN domains 3, [Score=103, Expect=5e-23]; ENSMUSG00000074865, Zfp934, zinc finger protein 934, [Score=102, Expect=1e-22]} {Dmel: FBgn0038301, CG6654, [Score=100, Expect=4e-22]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=76.3, Expect=3e-14]} {Smed: dd_Smed_v6_2890_0_1, dd_Smed_v6_2890_0_1, [Score=366, Expect=1e-118]} {RNA1509_25870, RNA1509_41416, RNA1509_41624, RNA1509_51018} {RNA1310_6870, RNA1509_25870, RNA1509_41624, RNA1509_51018} {RNA1509_25870, RNA1509_41624, RNA1509_51018, RNA815_1311.1} |
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