Data search


search
Exact
Search

Results for MligTC455_16969

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_16969 1871 38.99 Mlig455_018081

Neo: -

Age: -

FLOT1 Mlig455_018081 {REF} {Length: 3416} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=67.5]; Flotillin [PF15975.7, score=25.4]} {Human: ENSG00000230143, FLOT1, flotillin 1, [RH, Score=556, Expect=0.0]; ENSG00000137312, FLOT1, flotillin 1, [RH, Score=556, Expect=0.0]; ENSG00000206480, FLOT1, flotillin 1, [RH, Score=556, Expect=0.0]; ENSG00000232280, FLOT1, flotillin 1, [RH, Score=556, Expect=0.0]; ENSG00000206379, FLOT1, flotillin 1, [RH, Score=556, Expect=0.0]} {Mouse: ENSMUSG00000059714, Flot1, flotillin 1, [RH, Score=555, Expect=0.0]} {Dmel: FBgn0024754, Flo1, Flotillin 1, [RH, Score=578, Expect=0.0]} {Smed: dd_Smed_v6_1637_0_1, dd_Smed_v6_1637_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_13734, RNA1509_16435, RNA1509_24330, RNA1509_25141, RNA1509_26027, RNA1509_51874, RNA1509_7910} {RNA1310_20270, RNA1509_13734, RNA1509_16435, RNA1509_24330, RNA1509_25141, RNA1509_26027, RNA1509_51874, RNA1509_7910} {RNA1509_13734, RNA1509_16435, RNA1509_24330, RNA1509_25141, RNA1509_26027, RNA1509_51874, RNA1509_7910, RNA815_8769}

Cumulative graph for MligTC455_16969

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.592 5.507 0.44625 1.00000
RegionR2 -0.538 5.507 0.12789 0.44371
RegionR3 -0.352 5.507 0.24053 0.78176
RegionR4 0.819 5.507 0.02090 0.10532
RegionR5 -0.083 5.507 0.77512 1.00000
RegionR6 -0.009 5.507 0.97693 1.00000
RegionR7 0.296 5.507 0.37264 1.00000
RegionR8 0.459 5.507 0.23081 0.84380

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.769 5.507 0.51005 1.00000
RegenerationR2 -0.074 5.507 0.82384 0.99583
RegenerationR3 -0.55 5.507 0.12807 0.54997
RegenerationR4 -0.69 5.507 0.06275 0.40078
RegenerationR5 -0.317 5.507 0.37316 0.78271
RegenerationR6 -0.155 5.507 0.66247 0.90475
RegenerationBL -0.593 5.507 0.10194 0.37629
RegenerationTP -1.245 5.507 0.00238 0.07954


Genes with expression patterns similar to MligTC455_16969

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_16969 1871 38.99 Mlig455_018081

Neo: -

Age: -

FLOT1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_018081 {REF} {Length: 3416} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=67.5]; Flotillin [PF15975.7, score=25.4]} {Human: ENSG00000230143, FLOT1, flotillin 1, [RH, Score=556, Expect=0.0]; ENSG00000137312, FLOT1, flotillin 1, [RH, Score=556, Expect=0.0]; ENSG00000206480, FLOT1, flotillin 1, [RH, Score=556, Expect=0.0]; ENSG00000232280, FLOT1, flotillin 1, [RH, Score=556, Expect=0.0]; ENSG00000206379, FLOT1, flotillin 1, [RH, Score=556, Expect=0.0]} {Mouse: ENSMUSG00000059714, Flot1, flotillin 1, [RH, Score=555, Expect=0.0]} {Dmel: FBgn0024754, Flo1, Flotillin 1, [RH, Score=578, Expect=0.0]} {Smed: dd_Smed_v6_1637_0_1, dd_Smed_v6_1637_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_13734, RNA1509_16435, RNA1509_24330, RNA1509_25141, RNA1509_26027, RNA1509_51874, RNA1509_7910} {RNA1310_20270, RNA1509_13734, RNA1509_16435, RNA1509_24330, RNA1509_25141, RNA1509_26027, RNA1509_51874, RNA1509_7910} {RNA1509_13734, RNA1509_16435, RNA1509_24330, RNA1509_25141, RNA1509_26027, RNA1509_51874, RNA1509_7910, RNA815_8769}
2. MligTC455_04176 877 18.27 Mlig455_054450

Neo: -

Age: -

CNNM2 0.967 - - - 0.967 - - Mlig455_054450 {REF} {Length: 4443} {TRANSSPLICED} {Pfam: Cyclin M transmembrane N-terminal domain [PF01595.22, score=110.9]; CBS domain [PF00571.30, score=29.5]} {Human: ENSG00000148842, CNNM2, cyclin and CBS domain divalent metal cation transport mediator 2, [RH, Score=397, Expect=3e-125]; ENSG00000158158, CNNM4, cyclin and CBS domain divalent metal cation transport mediator 4, [RH, Score=387, Expect=4e-122]} {Mouse: ENSMUSG00000064105, Cnnm2, cyclin M2, [RH, Score=396, Expect=5e-125]; ENSMUSG00000037408, Cnnm4, cyclin M4, [RH, Score=384, Expect=3e-121]} {Dmel: FBgn0262124, uex, unextended, [RH, Score=402, Expect=2e-127]} {Celegans: WBGene00016879, cnnm-1, Metal transporter cnnm-1, [RH, Score=299, Expect=5e-89]} {Smed: dd_Smed_v6_6903_0_1, dd_Smed_v6_6903_0_1, [RH, Score=419, Expect=1e-134]} {RNA1509_33003, RNA1509_9183} {RNA1310_7581.1, RNA1509_33003} {RNA1509_33003, RNA815_1409.1}
3. MligTC455_30707 2925 60.95 Mlig455_060410

Neo: -

Age: -

RAB2A 0.952 - - - - - 0.952 Mlig455_060410 {REF} {Length: 3929} {Pfam: Ras family [PF00071.24, score=208.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.2]; ADP-ribosylation factor family [PF00025.23, score=47.1]; 50S ribosome-binding GTPase [PF01926.25, score=23.0]; RsgA GTPase [PF03193.18, score=19.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=18.8]} {Human: ENSG00000104388, RAB2A, RAB2A, member RAS oncogene family, [RH, Score=384, Expect=3e-137]; ENSG00000129472, RAB2B, RAB2B, member RAS oncogene family, [RH, Score=383, Expect=9e-137]} {Mouse: ENSMUSG00000047187, Rab2a, RAB2A, member RAS oncogene family, [RH, Score=384, Expect=2e-137]; ENSMUSG00000022159, Rab2b, RAB2B, member RAS oncogene family, [RH, Score=377, Expect=9e-135]} {Dmel: FBgn0014009, Rab2, [RH, Score=385, Expect=4e-138]} {Celegans: WBGene00006833, unc-108, Rab-2, [RH, Score=389, Expect=1e-139]} {Smed: dd_Smed_v6_1113_0_1, dd_Smed_v6_1113_0_1, [RH, Score=402, Expect=6e-145]} {RNA1509_3864, RNA1509_39216} {RNA1310_31897.1, RNA1509_3864, RNA1509_39216} {RNA1509_3864, RNA1509_39216, RNA815_11446.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA