Data search
Results for MligTC455_16980
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16980 | 193 | 4.02 | Mlig455_034649 | Neo: - Age: Down-Up-Down |
ZCCHC10 | Mlig455_034649 {REF} {Length: 2897} {TRANSSPLICED} {Pfam: Zinc knuckle [PF13917.8, score=50.4]; Nuclear RNA-splicing-associated protein [PF10500.11, score=20.2]} {Human: ENSG00000155329, ZCCHC10, zinc finger CCHC-type containing 10, [RH, Score=61.2, Expect=1e-11]} {Mouse: ENSMUSG00000018239, Zcchc10, zinc finger, CCHC domain containing 10, [RH, Score=60.5, Expect=2e-11]} {Dmel: FBgn0038389, CG5516, [RH, Score=56.2, Expect=4e-10]} {Smed: dd_Smed_v6_6155_0_1, dd_Smed_v6_6155_0_1, [RH, Score=47.8, Expect=2e-07]} {RNA1509_4370, RNA1509_55281} {RNA1310_34233.1, RNA1509_55281} {RNA1509_55281, RNA815_3991} |
Cumulative graph for MligTC455_16980
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.043 | 2.703 | 0.29684 | 0.94750 | |
| RegionR2 | 0.45 | 2.703 | 0.67585 | 1.00000 | |
| RegionR3 | 0.421 | 2.703 | 0.66502 | 1.00000 | |
| RegionR4 | 1.301 | 2.703 | 0.22809 | 0.52058 | |
| RegionR5 | 0.929 | 2.703 | 0.32239 | 0.66466 | |
| RegionR6 | 0.618 | 2.703 | 0.55557 | 1.00000 | |
| RegionR7 | 1.521 | 2.703 | 0.15804 | 0.73434 | |
| RegionR8 | -0.197 | 2.703 | 0.91578 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.599 | 2.703 | 0.99994 | 1.00000 | |
| RegenerationR2 | -0.72 | 2.703 | 0.36876 | 0.79460 | |
| RegenerationR3 | -0.431 | 2.703 | 0.60255 | 0.90912 | |
| RegenerationR4 | -0.218 | 2.703 | 0.78697 | 0.98297 | |
| RegenerationR5 | -0.359 | 2.703 | 0.62933 | 0.92238 | |
| RegenerationR6 | 1 | 2.703 | 0.20201 | 0.54344 | |
| RegenerationBL | 0.252 | 2.703 | 0.79142 | 1.00000 | |
| RegenerationTP | -0.206 | 2.703 | 0.86410 | 1.00000 |
Genes with expression patterns similar to MligTC455_16980
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16980 | 193 | 4.02 | Mlig455_034649 | Neo: - Age: Down-Up-Down |
ZCCHC10 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_034649 {REF} {Length: 2897} {TRANSSPLICED} {Pfam: Zinc knuckle [PF13917.8, score=50.4]; Nuclear RNA-splicing-associated protein [PF10500.11, score=20.2]} {Human: ENSG00000155329, ZCCHC10, zinc finger CCHC-type containing 10, [RH, Score=61.2, Expect=1e-11]} {Mouse: ENSMUSG00000018239, Zcchc10, zinc finger, CCHC domain containing 10, [RH, Score=60.5, Expect=2e-11]} {Dmel: FBgn0038389, CG5516, [RH, Score=56.2, Expect=4e-10]} {Smed: dd_Smed_v6_6155_0_1, dd_Smed_v6_6155_0_1, [RH, Score=47.8, Expect=2e-07]} {RNA1509_4370, RNA1509_55281} {RNA1310_34233.1, RNA1509_55281} {RNA1509_55281, RNA815_3991} |
| 2. | MligTC455_39267 | 863 | 17.98 | Mlig455_034556, Mlig455_041487 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.003/0.01804 Regeneration-upregulated R6: 1.720 Regeneration-enriched R6: 1.720 |
0.959 | - | - | - | 0.959 | - | - | Mlig455_034556 {REF} {Length: 2555} {TRANSSPLICED} {Pfam: PPR repeat family [PF13041.8, score=39.5]; Pentatricopeptide repeat domain [PF13812.8, score=32.4]} {Dmel: FBgn0035591, CG4611, [RH, Score=62.0, Expect=1e-09]} {Smed: dd_Smed_v6_8676_0_1, dd_Smed_v6_8676_0_1, [RH, Score=78.6, Expect=4e-15]} {RNA1509_11091, RNA1509_17932} {RNA1310_4937.2, RNA1509_11091, RNA1509_17932} {RNA1509_11091, RNA1509_17932, RNA815_928} Mlig455_041487 {REF} {Length: 2559} {TRANSSPLICED} {Pfam: PPR repeat family [PF13041.8, score=39.9]; Pentatricopeptide repeat domain [PF13812.8, score=33.7]} {Smed: dd_Smed_v6_8676_0_2, dd_Smed_v6_8676_0_2, [Score=75.5, Expect=2e-14]} {RNA1509_17932} {RNA1310_4937.1} {RNA815_928} |
|
| 3. | MligTC455_24969 | 168 | 3.5 | Mlig455_001371, Mlig455_001390 | Neo: - |
0.958 | - | - | - | 0.958 | - | - | Mlig455_001371 {REF} {Length: 2286} {RNA1509_19455} {RNA1310_20818} {RNA815_23612} Mlig455_001390 {REF} {Length: 3512} {Pfam: C2H2-type zinc finger [PF13894.8, score=25.4]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.3]; Zinc finger, C2H2 type [PF00096.28, score=21.2]; Cysteine rich domain with multizinc binding regions [PF17979.3, score=19.6]} {Dmel: FBgn0036725, CG18265, [RH, Score=62.8, Expect=8e-10]} {Celegans: WBGene00000995, die-1, Dorsal Intercalation and Elongation defect, [Score=55.5, Expect=1e-07]} {Smed: dd_Smed_v6_34785_0_1, dd_Smed_v6_34785_0_1, [Score=106, Expect=3e-24]} {RNA1509_19455} {RNA1310_20818} {RNA815_23612} |
|
| 4. | MligTC455_47004 | 371 | 7.72 | Mlig455_007268 | Neo: - Age: Down-Up-Up |
OGFOD1 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_007268 {REF} {Length: 1419} {Pfam: Oxoglutarate and iron-dependent oxygenase degradation C-term [PF10637.11, score=46.5]} {Human: ENSG00000087263, OGFOD1, 2-oxoglutarate and iron dependent oxygenase domain containing 1, [Score=86.3, Expect=5e-19]} {Mouse: ENSMUSG00000033009, Ogfod1, 2-oxoglutarate and iron-dependent oxygenase domain containing 1, [Score=85.5, Expect=6e-19]} {RNA1509_32662, RNA1509_50798} {RNA1310_19206, RNA1509_32662, RNA1509_50798} {RNA1509_32662, RNA1509_50798, RNA815_18604} |
| 5. | MligTC455_54219 | 1004 | 20.92 | Mlig455_056207 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.346 Regeneration-upregulated R6: 1.561 Regeneration-enriched R6: 1.561 |
NUP93 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_056207 {REF} {Length: 3132} {Pfam: Nup93/Nic96 [PF04097.16, score=370.6]} {Human: ENSG00000102900, NUP93, nucleoporin 93, [RH, Score=436, Expect=7e-140]} {Mouse: ENSMUSG00000032939, Nup93, nucleoporin 93, [RH, Score=440, Expect=1e-141]} {Dmel: FBgn0027537, Nup93-1, Nucleoporin 93kD-1, [RH, Score=295, Expect=4e-87]} {Smed: dd_Smed_v6_9207_0_1, dd_Smed_v6_9207_0_1, [RH, Score=318, Expect=8e-96]} {RNA1509_8355} {RNA1310_4739, RNA1509_8355} {RNA1509_8355, RNA815_23464} |
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