Data search
Results for MligTC455_16997
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16997 | 691 | 14.39 | Mlig455_011444 | Neo: - Age: - Region-enriched R4: 1.603/0.00066 |
CALM3 | Mlig455_011444 {REF} {Length: 1007} {Pfam: EF hand [PF00036.34, score=89.2]; EF-hand domain pair [PF13499.8, score=85.1]; EF-hand domain [PF13405.8, score=73.1]; EF-hand domain pair [PF13833.8, score=65.9]; EF hand [PF13202.8, score=61.3]; EF-hand domain [PF14658.8, score=42.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=25.7]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=169, Expect=4e-54]; ENSG00000198668, CALM1, calmodulin 1, [Score=169, Expect=3e-54]; ENSG00000143933, CALM2, calmodulin 2, [Score=169, Expect=4e-54]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=169, Expect=3e-54]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=169, Expect=3e-54]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=169, Expect=3e-54]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=166, Expect=7e-53]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=167, Expect=1e-53]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=167, Expect=8e-54]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=167, Expect=6e-54]} {RNA1509_34192} {RNA1310_44408, RNA1509_34192} {RNA1509_34192, RNA815_20757} |
Cumulative graph for MligTC455_16997
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.311 | 4.035 | 0.69908 | 1.00000 | |
| RegionR2 | 0.699 | 4.035 | 0.09626 | 0.38049 | |
| RegionR3 | 0.388 | 4.035 | 0.29041 | 0.83298 | |
| RegionR4 | 1.603 | 4.035 | 0.00004 | 0.00066 | |
| RegionR5 | -1.03 | 4.035 | 0.00993 | 0.05745 | |
| RegionR6 | -0.166 | 4.035 | 0.68230 | 1.00000 | |
| RegionR7 | -0.919 | 4.035 | 0.07397 | 0.52441 | |
| RegionR8 | -0.885 | 4.035 | 0.13233 | 0.66596 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.793 | 4.035 | 0.00249 | 0.25609 | |
| RegenerationR2 | -0.548 | 4.035 | 0.16423 | 0.60191 | |
| RegenerationR3 | -0.472 | 4.035 | 0.27997 | 0.71281 | |
| RegenerationR4 | -1.37 | 4.035 | 0.00158 | 0.04796 | |
| RegenerationR5 | -0.262 | 4.035 | 0.58366 | 0.90208 | |
| RegenerationR6 | -0.68 | 4.035 | 0.17350 | 0.50574 | |
| RegenerationBL | -0.622 | 4.035 | 0.29897 | 0.66217 | |
| RegenerationTP | 0.288 | 4.035 | 0.62449 | 0.97434 |
Genes with expression patterns similar to MligTC455_16997
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16997 | 691 | 14.39 | Mlig455_011444 | Neo: - Age: - Region-enriched R4: 1.603/0.00066 |
CALM3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011444 {REF} {Length: 1007} {Pfam: EF hand [PF00036.34, score=89.2]; EF-hand domain pair [PF13499.8, score=85.1]; EF-hand domain [PF13405.8, score=73.1]; EF-hand domain pair [PF13833.8, score=65.9]; EF hand [PF13202.8, score=61.3]; EF-hand domain [PF14658.8, score=42.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=25.7]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=169, Expect=4e-54]; ENSG00000198668, CALM1, calmodulin 1, [Score=169, Expect=3e-54]; ENSG00000143933, CALM2, calmodulin 2, [Score=169, Expect=4e-54]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=169, Expect=3e-54]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=169, Expect=3e-54]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=169, Expect=3e-54]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=166, Expect=7e-53]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=167, Expect=1e-53]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=167, Expect=8e-54]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=167, Expect=6e-54]} {RNA1509_34192} {RNA1310_44408, RNA1509_34192} {RNA1509_34192, RNA815_20757} |
| 2. | MligTC455_16998 | 650 | 13.54 | Mlig455_061182 | Neo: - Age: - Region-enriched R4: 2.023/0.00002 |
CALM3 | 5.433 | 0.979 | 0.950 | 0.887 | 0.959 | 0.724 | 0.934 | Mlig455_061182 {REF} {Length: 1000} {Pfam: EF hand [PF00036.34, score=83.9]; EF-hand domain pair [PF13499.8, score=82.3]; EF-hand domain [PF13405.8, score=70.8]; EF-hand domain pair [PF13833.8, score=64.9]; EF hand [PF13202.8, score=56.3]; EF-hand domain [PF14658.8, score=38.7]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.3]; OST-HTH/LOTUS domain [PF12872.9, score=18.4]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=163, Expect=8e-52]; ENSG00000198668, CALM1, calmodulin 1, [Score=163, Expect=7e-52]; ENSG00000143933, CALM2, calmodulin 2, [Score=163, Expect=8e-52]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=163, Expect=5e-52]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=5e-52]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=163, Expect=5e-52]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=161, Expect=3e-51]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=2e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=162, Expect=1e-51]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=162, Expect=1e-51]} {RNA1509_34192} {RNA1310_44408} {RNA815_20757} |
Berezikov Lab - 2020-2021 © ERIBA