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Results for MligTC455_17048

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17048 710 14.79 Mlig455_008113

Neo: -

Age: -

 PUF60 Mlig455_008113 {REF} {Length: 1991} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=150.4]; RNA recognition motif [PF16367.7, score=28.0]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=22.5]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.5]} {Human: ENSG00000179950, PUF60, poly(U) binding splicing factor 60, [Score=316, Expect=3e-101]; ENSG00000274081, PUF60, poly(U) binding splicing factor 60, [Score=315, Expect=3e-101]} {Mouse: ENSMUSG00000002524, Puf60, poly-U binding splicing factor 60, [Score=317, Expect=1e-101]} {Dmel: FBgn0028577, hfp, half pint, [RH, Score=227, Expect=1e-66]} {Celegans: WBGene00004389, rnp-6, RNP (RRM RNA binding domain) containing, [RH, Score=232, Expect=1e-71]} {Smed: dd_Smed_v6_3853_0_3, dd_Smed_v6_3853_0_3, [Score=358, Expect=1e-118]} {RNA1509_37979} {RNA1310_10354.1, RNA1509_37979} {RNA1509_37979, RNA815_13541}

Cumulative graph for MligTC455_17048

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.834 4.236 0.21846 0.86063
RegionR2 0.394 4.236 0.39640 0.79072
RegionR3 0.214 4.236 0.59168 1.00000
RegionR4 0.742 4.236 0.07171 0.24596
RegionR5 0.589 4.236 0.08809 0.27948
RegionR6 0.253 4.236 0.53928 1.00000
RegionR7 -0.347 4.236 0.57287 1.00000
RegionR8 -0.01 4.236 0.99161 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.366 4.236 0.34329 1.00000
RegenerationR2 0.213 4.236 0.49499 0.86935
RegenerationR3 0.635 4.236 0.07966 0.46491
RegenerationR4 0.402 4.236 0.25250 0.70098
RegenerationR5 0.44 4.236 0.15987 0.58333
RegenerationR6 1.187 4.236 0.00086 0.03189
RegenerationBL 1.481 4.236 0.00049 0.01383
RegenerationTP 0.621 4.236 0.26725 0.71468


Genes with expression patterns similar to MligTC455_17048

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17048 710 14.79 Mlig455_008113

Neo: -

Age: -

 PUF60 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_008113 {REF} {Length: 1991} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=150.4]; RNA recognition motif [PF16367.7, score=28.0]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=22.5]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.5]} {Human: ENSG00000179950, PUF60, poly(U) binding splicing factor 60, [Score=316, Expect=3e-101]; ENSG00000274081, PUF60, poly(U) binding splicing factor 60, [Score=315, Expect=3e-101]} {Mouse: ENSMUSG00000002524, Puf60, poly-U binding splicing factor 60, [Score=317, Expect=1e-101]} {Dmel: FBgn0028577, hfp, half pint, [RH, Score=227, Expect=1e-66]} {Celegans: WBGene00004389, rnp-6, RNP (RRM RNA binding domain) containing, [RH, Score=232, Expect=1e-71]} {Smed: dd_Smed_v6_3853_0_3, dd_Smed_v6_3853_0_3, [Score=358, Expect=1e-118]} {RNA1509_37979} {RNA1310_10354.1, RNA1509_37979} {RNA1509_37979, RNA815_13541}
2. MligTC455_19409 2981 62.11 Mlig455_056289, Mlig455_056315

Neo: Neoblast

Age: logFC(26M/2M)=0.246

 LSM4 2.619 - - - 0.987 0.870 0.762

Mlig455_056289 {REF} {Length: 975} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=58.7]} {Human: ENSG00000130520, LSM4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=164, Expect=3e-51]} {Mouse: ENSMUSG00000031848, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=162, Expect=6e-52]; ENSMUSG00000110900, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=162, Expect=6e-52]} {Dmel: FBgn0032240, CG17768, [RH, Score=163, Expect=3e-52]} {Celegans: WBGene00003078, lsm-4, Probable U6 snRNA-associated Sm-like protein LSm4, [RH, Score=130, Expect=6e-40]} {Smed: dd_Smed_v6_2440_0_1, dd_Smed_v6_2440_0_1, [RH, Score=113, Expect=7e-33]} {RNA1509_15803, RNA1509_8523} {RNA1310_35821.1, RNA1509_15803, RNA1509_8523} {RNA1509_15803, RNA1509_8523, RNA815_28519}

Mlig455_056315 {REF} {Length: 939} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=58.9]} {Human: ENSG00000130520, LSM4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=163, Expect=7e-51]} {Mouse: ENSMUSG00000031848, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=161, Expect=1e-51]; ENSMUSG00000110900, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=161, Expect=1e-51]} {Dmel: FBgn0032240, CG17768, [RH, Score=162, Expect=7e-52]} {Celegans: WBGene00003078, lsm-4, Probable U6 snRNA-associated Sm-like protein LSm4, [RH, Score=130, Expect=7e-40]} {Smed: dd_Smed_v6_2440_0_1, dd_Smed_v6_2440_0_1, [RH, Score=122, Expect=1e-36]} {RNA1509_22792} {RNA1310_35821.1, RNA1509_22792} {RNA1509_22792, RNA815_28519}
3. MligTC455_44475 2592 54 Mlig455_006353, Mlig455_006402

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.652

Regeneration-enriched BL: 1.652

 PLRG1 1.696 - - - 0.950 0.746 -

Mlig455_006353 {REF} {Length: 1600} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=150.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.0]; Nup133 N terminal like [PF08801.13, score=20.1]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=19.6]} {Human: ENSG00000171566, PLRG1, pleiotropic regulator 1, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000027998, Plrg1, pleiotropic regulator 1, [RH, Score=584, Expect=0.0]} {Dmel: FBgn0030365, Tango4, Transport and Golgi organization 4, [RH, Score=569, Expect=0.0]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [RH, Score=523, Expect=0.0]} {Smed: dd_Smed_v6_6000_0_1, dd_Smed_v6_6000_0_1, [RH, Score=464, Expect=7e-162]} {RNA1509_33802, RNA1509_8487} {RNA1310_19706, RNA1509_33802, RNA1509_8487} {RNA1509_33802, RNA1509_8487, RNA815_8176}

Mlig455_006402 {REF} {Length: 1604} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=151.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=35.0]; Nup133 N terminal like [PF08801.13, score=20.9]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=19.4]} {Human: ENSG00000171566, PLRG1, pleiotropic regulator 1, [RH, Score=576, Expect=0.0]} {Mouse: ENSMUSG00000027998, Plrg1, pleiotropic regulator 1, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0030365, Tango4, Transport and Golgi organization 4, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [RH, Score=525, Expect=0.0]} {Smed: dd_Smed_v6_6000_0_1, dd_Smed_v6_6000_0_1, [RH, Score=468, Expect=3e-163]} {RNA1509_33802} {RNA1310_19706} {RNA815_8176}
4. MligTC455_44708 1291 26.9 Mlig455_063420, Mlig455_066634

Neo: -

Age: -

Regeneration-upregulated BL: 1.724

Regeneration-enriched BL: 1.724

 NDEL1 1.675 - - - 0.961 - 0.714

Mlig455_063420 {REF} {Length: 2131} {TRANSSPLICED} {Pfam: NUDE protein, C-terminal conserved region [PF04880.15, score=66.1]} {Human: ENSG00000166579, NDEL1, nudE neurodevelopment protein 1 like 1, [RH, Score=192, Expect=2e-57]; ENSG00000275911, NDE1, nudE neurodevelopment protein 1, [RH, Score=186, Expect=4e-55]; ENSG00000072864, NDE1, nudE neurodevelopment protein 1, [RH, Score=186, Expect=4e-55]} {Mouse: ENSMUSG00000018736, Ndel1, nudE neurodevelopment protein 1 like 1, [RH, Score=191, Expect=2e-57]; ENSMUSG00000022678, Nde1, nudE neurodevelopment protein 1, [RH, Score=189, Expect=2e-56]} {Dmel: FBgn0036059, nudE, [RH, Score=114, Expect=2e-28]} {Celegans: WBGene00011230, nud-2, Aspergillus NUclear Division related, [Score=55.8, Expect=1e-08]} {Smed: dd_Smed_v6_1670_0_1, dd_Smed_v6_1670_0_1, [RH, Score=155, Expect=2e-43]} {RNA1509_18131, RNA1509_46395} {RNA1310_12291, RNA1509_18131, RNA1509_46395} {RNA1509_18131, RNA1509_46395, RNA815_21817}

Mlig455_066634 {REF} {Length: 2098} {TRANSSPLICED} {Pfam: NUDE protein, C-terminal conserved region [PF04880.15, score=65.8]} {Human: ENSG00000166579, NDEL1, nudE neurodevelopment protein 1 like 1, [RH, Score=193, Expect=6e-58]; ENSG00000275911, NDE1, nudE neurodevelopment protein 1, [RH, Score=186, Expect=3e-55]; ENSG00000072864, NDE1, nudE neurodevelopment protein 1, [RH, Score=186, Expect=3e-55]} {Mouse: ENSMUSG00000018736, Ndel1, nudE neurodevelopment protein 1 like 1, [RH, Score=193, Expect=4e-58]; ENSMUSG00000022678, Nde1, nudE neurodevelopment protein 1, [RH, Score=189, Expect=2e-56]} {Dmel: FBgn0036059, nudE, [RH, Score=115, Expect=6e-29]} {Celegans: WBGene00011230, nud-2, Aspergillus NUclear Division related, [Score=55.8, Expect=1e-08]} {Smed: dd_Smed_v6_1670_0_1, dd_Smed_v6_1670_0_1, [RH, Score=154, Expect=2e-43]} {RNA1509_46395} {RNA1310_12291} {RNA815_21817}
5. MligTC455_36859 8302 172.96 Mlig455_052575, Mlig455_052589

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.160

Regeneration-upregulated BL: 1.152

Regeneration-enriched BL: 1.152

 CCT4 0.956 - - - - - 0.956

Mlig455_052575 {REF} {Length: 2701} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=521.7]} {Human: ENSG00000115484, CCT4, chaperonin containing TCP1 subunit 4, [RH, Score=737, Expect=0.0]} {Mouse: ENSMUSG00000007739, Cct4, chaperonin containing Tcp1, subunit 4 (delta), [RH, Score=743, Expect=0.0]} {Dmel: FBgn0032444, CCT4, Chaperonin containing TCP1 subunit 4, [RH, Score=719, Expect=0.0]} {Celegans: WBGene00000379, cct-4, T-complex protein 1 subunit delta, [RH, Score=684, Expect=0.0]} {Smed: dd_Smed_v6_773_0_1, dd_Smed_v6_773_0_1, [RH, Score=696, Expect=0.0]} {RNA1509_21171, RNA1509_28619, RNA1509_59217} {RNA1310_8306, RNA1509_21171, RNA1509_28619, RNA1509_59217} {RNA1509_21171, RNA1509_28619, RNA1509_59217, RNA815_3268.1}

Mlig455_052589 {REF} {Length: 2376} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=522.7]} {Human: ENSG00000115484, CCT4, chaperonin containing TCP1 subunit 4, [RH, Score=735, Expect=0.0]} {Mouse: ENSMUSG00000007739, Cct4, chaperonin containing Tcp1, subunit 4 (delta), [RH, Score=742, Expect=0.0]} {Dmel: FBgn0032444, CCT4, Chaperonin containing TCP1 subunit 4, [RH, Score=718, Expect=0.0]} {Celegans: WBGene00000379, cct-4, T-complex protein 1 subunit delta, [RH, Score=686, Expect=0.0]} {Smed: dd_Smed_v6_773_0_1, dd_Smed_v6_773_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_41020} {RNA1310_9068.1} {RNA815_3268.1}
6. MligTC455_45363 3864 80.5 Mlig455_060371

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_060371 {REF} {Length: 1349} {TRANSSPLICED} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=48.6]; Tight junction protein, Claudin-like [PF06653.13, score=20.6]} {Dmel: FBgn0033032, kune, kune-kune, [Score=76.3, Expect=4e-16]} {Smed: dd_Smed_v6_2204_1_1, dd_Smed_v6_2204_1_1, [RH, Score=167, Expect=5e-50]} {RNA1509_10024, RNA1509_12255, RNA1509_17774, RNA1509_18032, RNA1509_25082, RNA1509_33957, RNA1509_40415, RNA1509_44939, RNA1509_58767} {RNA1310_23527, RNA1509_10024, RNA1509_12255, RNA1509_17774, RNA1509_18032, RNA1509_25082, RNA1509_33957, RNA1509_40415, RNA1509_44939, RNA1509_58767} {RNA1509_10024, RNA1509_12255, RNA1509_17774, RNA1509_18032, RNA1509_25082, RNA1509_33957, RNA1509_40415, RNA1509_44939, RNA1509_58767, RNA815_21322}

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