TomoSeq data search

Data search

Results for MligTC455_17053

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_17053	861	17.95	Mlig455_041079	Neo: - Age: -	BEST4	Mlig455_041079 {REF} {Length: 2284} {TRANSSPLICED} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=171.2]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=162, Expect=2e-43]; ENSG00000127325, BEST3, bestrophin 3, [Score=156, Expect=3e-40]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [Score=154, Expect=1e-39]; ENSMUSG00000052819, Best2, bestrophin 2, [Score=147, Expect=4e-38]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=183, Expect=9e-50]} {Celegans: WBGene00015286, best-3, Bestrophin homolog, [Score=166, Expect=4e-44]} {Smed: dd_Smed_v6_2084_0_1, dd_Smed_v6_2084_0_1, [Score=297, Expect=5e-95]} {RNA1509_25950, RNA1509_2913} {RNA1310_687, RNA1509_25950, RNA1509_2913} {RNA1509_25950, RNA1509_2913, RNA815_420.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_17053

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.123	4.451	0.88949	1.00000
RegionR2	0.322	4.451	0.46417	0.85086
RegionR3	-1.045	4.451	0.00587	0.10623
RegionR4	-1.422	4.451	0.00080	0.00877
RegionR5	0.382	4.451	0.20207	0.49351
RegionR6	0.158	4.451	0.63744	1.00000
RegionR7	0.382	4.451	0.38345	1.00000
RegionR8	1.345	4.451	0.00662	0.14870

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.585	4.451	0.04292	0.67581
RegenerationR2	0.895	4.451	0.01301	0.18540
RegenerationR3	1.175	4.451	0.00754	0.15884
RegenerationR4	0.077	4.451	0.86241	1.00000
RegenerationR5	-0.308	4.451	0.41492	0.80840
RegenerationR6	-1.099	4.451	0.01391	0.14531
RegenerationBL	-0.47	4.451	0.32325	0.69009
RegenerationTP	-0.226	4.451	0.62964	0.97749

Genes with expression patterns similar to MligTC455_17053

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17053	861	17.95	Mlig455_041079	Neo: - Age: -	BEST4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041079 {REF} {Length: 2284} {TRANSSPLICED} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=171.2]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=162, Expect=2e-43]; ENSG00000127325, BEST3, bestrophin 3, [Score=156, Expect=3e-40]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [Score=154, Expect=1e-39]; ENSMUSG00000052819, Best2, bestrophin 2, [Score=147, Expect=4e-38]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=183, Expect=9e-50]} {Celegans: WBGene00015286, best-3, Bestrophin homolog, [Score=166, Expect=4e-44]} {Smed: dd_Smed_v6_2084_0_1, dd_Smed_v6_2084_0_1, [Score=297, Expect=5e-95]} {RNA1509_25950, RNA1509_2913} {RNA1310_687, RNA1509_25950, RNA1509_2913} {RNA1509_25950, RNA1509_2913, RNA815_420.1}
2.	MligTC455_38803	3547	73.9	Mlig455_064495, Mlig455_064514, Mlig455_066056	Neo: - Age: -	PFKP	0.956	-	-	-	0.956	-	-	Mlig455_064495 {REF} {Length: 4264} {TRANSSPLICED} {Pfam: Phosphofructokinase [PF00365.22, score=623.4]} {Human: ENSG00000067057, PFKP, phosphofructokinase, platelet, [RH, Score=851, Expect=0.0]; ENSG00000141959, PFKL, phosphofructokinase, liver type, [RH, Score=849, Expect=0.0]; ENSG00000152556, PFKM, phosphofructokinase, muscle, [RH, Score=833, Expect=0.0]} {Mouse: ENSMUSG00000020277, Pfkl, phosphofructokinase, liver, B-type, [RH, Score=852, Expect=0.0]; ENSMUSG00000033065, Pfkm, phosphofructokinase, muscle, [RH, Score=836, Expect=0.0]; ENSMUSG00000021196, Pfkp, phosphofructokinase, platelet, [RH, Score=835, Expect=0.0]} {Dmel: FBgn0003071, Pfk, Phosphofructokinase, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00022199, pfk-1.1, ATP-dependent 6-phosphofructokinase 1, [RH, Score=827, Expect=0.0]} {Smed: dd_Smed_v6_1604_0_1, dd_Smed_v6_1604_0_1, [RH, Score=909, Expect=0.0]} {RNA1509_2362} {RNA1310_6048.2} {RNA815_2567} Mlig455_064514 {REF} {Length: 4193} {TRANSSPLICED} {Pfam: Phosphofructokinase [PF00365.22, score=623.4]} {Human: ENSG00000067057, PFKP, phosphofructokinase, platelet, [RH, Score=852, Expect=0.0]; ENSG00000141959, PFKL, phosphofructokinase, liver type, [RH, Score=849, Expect=0.0]; ENSG00000152556, PFKM, phosphofructokinase, muscle, [RH, Score=833, Expect=0.0]} {Mouse: ENSMUSG00000020277, Pfkl, phosphofructokinase, liver, B-type, [RH, Score=853, Expect=0.0]; ENSMUSG00000033065, Pfkm, phosphofructokinase, muscle, [RH, Score=837, Expect=0.0]; ENSMUSG00000021196, Pfkp, phosphofructokinase, platelet, [RH, Score=835, Expect=0.0]} {Dmel: FBgn0003071, Pfk, Phosphofructokinase, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00022199, pfk-1.1, ATP-dependent 6-phosphofructokinase 1, [RH, Score=827, Expect=0.0]} {Smed: dd_Smed_v6_1604_0_1, dd_Smed_v6_1604_0_1, [RH, Score=910, Expect=0.0]} {RNA1509_2362} {RNA1310_6048.2} {RNA815_2567} Mlig455_066056 {REF} {Length: 4089} {TRANSSPLICED} {Pfam: Phosphofructokinase [PF00365.22, score=623.5]} {Human: ENSG00000067057, PFKP, phosphofructokinase, platelet, [RH, Score=852, Expect=0.0]; ENSG00000141959, PFKL, phosphofructokinase, liver type, [RH, Score=849, Expect=0.0]; ENSG00000152556, PFKM, phosphofructokinase, muscle, [RH, Score=833, Expect=0.0]} {Mouse: ENSMUSG00000020277, Pfkl, phosphofructokinase, liver, B-type, [RH, Score=852, Expect=0.0]; ENSMUSG00000033065, Pfkm, phosphofructokinase, muscle, [RH, Score=837, Expect=0.0]; ENSMUSG00000021196, Pfkp, phosphofructokinase, platelet, [RH, Score=834, Expect=0.0]} {Dmel: FBgn0003071, Pfk, Phosphofructokinase, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00022199, pfk-1.1, ATP-dependent 6-phosphofructokinase 1, [RH, Score=827, Expect=0.0]} {Smed: dd_Smed_v6_1604_0_1, dd_Smed_v6_1604_0_1, [RH, Score=910, Expect=0.0]} {RNA1509_2362} {RNA1310_6048.2} {RNA815_2567}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_17053

861

17.95

Mlig455_041079

Neo: -

Age: -

BEST4

1.000

MligTC455_38803

3547

73.9

Mlig455_064495, Mlig455_064514, Mlig455_066056

Neo: -

Age: -

PFKP

0.956

Mlig455_064495 {REF} {Length: 4264} {TRANSSPLICED} {Pfam: Phosphofructokinase [PF00365.22, score=623.4]} {Human: ENSG00000067057, PFKP, phosphofructokinase, platelet, [RH, Score=851, Expect=0.0]; ENSG00000141959, PFKL, phosphofructokinase, liver type, [RH, Score=849, Expect=0.0]; ENSG00000152556, PFKM, phosphofructokinase, muscle, [RH, Score=833, Expect=0.0]} {Mouse: ENSMUSG00000020277, Pfkl, phosphofructokinase, liver, B-type, [RH, Score=852, Expect=0.0]; ENSMUSG00000033065, Pfkm, phosphofructokinase, muscle, [RH, Score=836, Expect=0.0]; ENSMUSG00000021196, Pfkp, phosphofructokinase, platelet, [RH, Score=835, Expect=0.0]} {Dmel: FBgn0003071, Pfk, Phosphofructokinase, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00022199, pfk-1.1, ATP-dependent 6-phosphofructokinase 1, [RH, Score=827, Expect=0.0]} {Smed: dd_Smed_v6_1604_0_1, dd_Smed_v6_1604_0_1, [RH, Score=909, Expect=0.0]} {RNA1509_2362} {RNA1310_6048.2} {RNA815_2567}

Mlig455_064514 {REF} {Length: 4193} {TRANSSPLICED} {Pfam: Phosphofructokinase [PF00365.22, score=623.4]} {Human: ENSG00000067057, PFKP, phosphofructokinase, platelet, [RH, Score=852, Expect=0.0]; ENSG00000141959, PFKL, phosphofructokinase, liver type, [RH, Score=849, Expect=0.0]; ENSG00000152556, PFKM, phosphofructokinase, muscle, [RH, Score=833, Expect=0.0]} {Mouse: ENSMUSG00000020277, Pfkl, phosphofructokinase, liver, B-type, [RH, Score=853, Expect=0.0]; ENSMUSG00000033065, Pfkm, phosphofructokinase, muscle, [RH, Score=837, Expect=0.0]; ENSMUSG00000021196, Pfkp, phosphofructokinase, platelet, [RH, Score=835, Expect=0.0]} {Dmel: FBgn0003071, Pfk, Phosphofructokinase, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00022199, pfk-1.1, ATP-dependent 6-phosphofructokinase 1, [RH, Score=827, Expect=0.0]} {Smed: dd_Smed_v6_1604_0_1, dd_Smed_v6_1604_0_1, [RH, Score=910, Expect=0.0]} {RNA1509_2362} {RNA1310_6048.2} {RNA815_2567}

Mlig455_066056 {REF} {Length: 4089} {TRANSSPLICED} {Pfam: Phosphofructokinase [PF00365.22, score=623.5]} {Human: ENSG00000067057, PFKP, phosphofructokinase, platelet, [RH, Score=852, Expect=0.0]; ENSG00000141959, PFKL, phosphofructokinase, liver type, [RH, Score=849, Expect=0.0]; ENSG00000152556, PFKM, phosphofructokinase, muscle, [RH, Score=833, Expect=0.0]} {Mouse: ENSMUSG00000020277, Pfkl, phosphofructokinase, liver, B-type, [RH, Score=852, Expect=0.0]; ENSMUSG00000033065, Pfkm, phosphofructokinase, muscle, [RH, Score=837, Expect=0.0]; ENSMUSG00000021196, Pfkp, phosphofructokinase, platelet, [RH, Score=834, Expect=0.0]} {Dmel: FBgn0003071, Pfk, Phosphofructokinase, [RH, Score=860, Expect=0.0]} {Celegans: WBGene00022199, pfk-1.1, ATP-dependent 6-phosphofructokinase 1, [RH, Score=827, Expect=0.0]} {Smed: dd_Smed_v6_1604_0_1, dd_Smed_v6_1604_0_1, [RH, Score=910, Expect=0.0]} {RNA1509_2362} {RNA1310_6048.2} {RNA815_2567}