TomoSeq data search

Data search

Results for MligTC455_17080

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_17080	449	9.34	Mlig455_026277, Mlig455_026294	Neo: - Age: Up-Down-Down	USP34	Mlig455_026277 {REF} {Length: 12601} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=141.2]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=48.9]} {Human: ENSG00000115464, USP34, ubiquitin specific peptidase 34, [RH, Score=1113, Expect=0.0]} {Mouse: ENSMUSG00000056342, Usp34, ubiquitin specific peptidase 34, [RH, Score=1105, Expect=0.0]} {Dmel: FBgn0039214, puf, puffyeye, [RH, Score=568, Expect=7e-162]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=148, Expect=6e-35]} {Smed: dd_Smed_v6_9967_0_1, dd_Smed_v6_9967_0_1, [RH, Score=396, Expect=5e-110]} {RNA1509_12734} {RNA1310_3987} {RNA815_510} Mlig455_026294 {REF} {Length: 12559} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=141.2]} {Human: ENSG00000115464, USP34, ubiquitin specific peptidase 34, [RH, Score=1072, Expect=0.0]} {Mouse: ENSMUSG00000056342, Usp34, ubiquitin specific peptidase 34, [RH, Score=1065, Expect=0.0]} {Dmel: FBgn0039214, puf, puffyeye, [Score=533, Expect=3e-151]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=142, Expect=6e-33]} {Smed: dd_Smed_v6_9967_0_1, dd_Smed_v6_9967_0_1, [RH, Score=385, Expect=1e-106]} {RNA1509_12734} {RNA1310_3987} {RNA815_510}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17080

449

9.34

Mlig455_026277, Mlig455_026294

Neo: -

Age: Up-Down-Down

USP34

Mlig455_026277 {REF} {Length: 12601} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=141.2]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=48.9]} {Human: ENSG00000115464, USP34, ubiquitin specific peptidase 34, [RH, Score=1113, Expect=0.0]} {Mouse: ENSMUSG00000056342, Usp34, ubiquitin specific peptidase 34, [RH, Score=1105, Expect=0.0]} {Dmel: FBgn0039214, puf, puffyeye, [RH, Score=568, Expect=7e-162]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=148, Expect=6e-35]} {Smed: dd_Smed_v6_9967_0_1, dd_Smed_v6_9967_0_1, [RH, Score=396, Expect=5e-110]} {RNA1509_12734} {RNA1310_3987} {RNA815_510}

Mlig455_026294 {REF} {Length: 12559} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=141.2]} {Human: ENSG00000115464, USP34, ubiquitin specific peptidase 34, [RH, Score=1072, Expect=0.0]} {Mouse: ENSMUSG00000056342, Usp34, ubiquitin specific peptidase 34, [RH, Score=1065, Expect=0.0]} {Dmel: FBgn0039214, puf, puffyeye, [Score=533, Expect=3e-151]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=142, Expect=6e-33]} {Smed: dd_Smed_v6_9967_0_1, dd_Smed_v6_9967_0_1, [RH, Score=385, Expect=1e-106]} {RNA1509_12734} {RNA1310_3987} {RNA815_510}

Cumulative graph for MligTC455_17080

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.268	3.698	0.11067	0.69208
RegionR2	0.564	3.698	0.57458	0.93251
RegionR3	1.64	3.698	0.02632	0.27714
RegionR4	1.538	3.698	0.09117	0.28897
RegionR5	1.403	3.698	0.05644	0.20425
RegionR6	0.094	3.698	0.81648	1.00000
RegionR7	0.137	3.698	0.80369	1.00000
RegionR8	0.893	3.698	0.40864	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.161	3.698	0.19336	0.93154
RegenerationR2	0.876	3.698	0.12902	0.55407
RegenerationR3	0.202	3.698	0.74457	0.96223
RegenerationR4	0.781	3.698	0.26872	0.71524
RegenerationR5	0.542	3.698	0.36483	0.77546
RegenerationR6	2.009	3.698	0.00214	0.05259
RegenerationBL	0.783	3.698	0.27256	0.63244
RegenerationTP	-0.112	3.698	0.89400	1.00000

Genes with expression patterns similar to MligTC455_17080

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17080	449	9.34	Mlig455_026277, Mlig455_026294	Neo: - Age: Up-Down-Down	USP34	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026277 {REF} {Length: 12601} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=141.2]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=48.9]} {Human: ENSG00000115464, USP34, ubiquitin specific peptidase 34, [RH, Score=1113, Expect=0.0]} {Mouse: ENSMUSG00000056342, Usp34, ubiquitin specific peptidase 34, [RH, Score=1105, Expect=0.0]} {Dmel: FBgn0039214, puf, puffyeye, [RH, Score=568, Expect=7e-162]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=148, Expect=6e-35]} {Smed: dd_Smed_v6_9967_0_1, dd_Smed_v6_9967_0_1, [RH, Score=396, Expect=5e-110]} {RNA1509_12734} {RNA1310_3987} {RNA815_510} Mlig455_026294 {REF} {Length: 12559} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=141.2]} {Human: ENSG00000115464, USP34, ubiquitin specific peptidase 34, [RH, Score=1072, Expect=0.0]} {Mouse: ENSMUSG00000056342, Usp34, ubiquitin specific peptidase 34, [RH, Score=1065, Expect=0.0]} {Dmel: FBgn0039214, puf, puffyeye, [Score=533, Expect=3e-151]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=142, Expect=6e-33]} {Smed: dd_Smed_v6_9967_0_1, dd_Smed_v6_9967_0_1, [RH, Score=385, Expect=1e-106]} {RNA1509_12734} {RNA1310_3987} {RNA815_510}
2.	MligTC455_17081	180	3.74	Mlig455_052717	Neo: - Age: -	USP34	4.691	0.980	0.989	0.974	-	0.851	0.897	Mlig455_052717 {REF} {Length: 1628} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=141.2]} {Human: ENSG00000115464, USP34, ubiquitin specific peptidase 34, [RH, Score=1072, Expect=0.0]} {Mouse: ENSMUSG00000056342, Usp34, ubiquitin specific peptidase 34, [RH, Score=1065, Expect=0.0]} {Dmel: FBgn0039214, puf, puffyeye, [Score=533, Expect=3e-151]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=142, Expect=6e-33]} {Smed: dd_Smed_v6_9967_0_1, dd_Smed_v6_9967_0_1, [RH, Score=385, Expect=1e-106]} {RNA1509_19715} {RNA1310_28012} {RNA815_22897}
3.	MligTC455_52777	186	3.88	Mlig455_053495	Neo: - Age: Down-Down-Up		1.797	-	-	0.844	-	-	0.953	Mlig455_053495 {REF} {Length: 1069} {TRANSSPLICED} {RNA1509_51911} {RNA1310_24820.2} {RNA815_14661}
4.	MligTC455_32385	185	3.85	Mlig455_006899	Neo: - Age: -		1.684	0.707	-	-	-	-	0.977	Mlig455_006899 {REF} {Length: 3112} {TRANSSPLICED} {Pfam: Autophagy receptor zinc finger-C2H2 domain [PF18112.3, score=22.3]} {RNA1509_19044, RNA1509_53255} {RNA1310_16904.1, RNA1509_19044, RNA1509_53255} {RNA1509_19044, RNA1509_53255, RNA815_20048}
5.	MligTC455_20804	455	9.47	Mlig455_043937, Mlig455_043950	Neo: - Age: -	SBF1, SBF2	0.952	-	-	-	-	-	0.952	Mlig455_043937 {REF} {Length: 7288} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=244.1]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=32.5]; PH domain [PF00169.31, score=20.9]} {Human: ENSG00000100241, SBF1, SET binding factor 1, [Score=375, Expect=1e-106]} {Mouse: ENSMUSG00000036529, Sbf1, SET binding factor 1, [Score=374, Expect=2e-106]; ENSMUSG00000038371, Sbf2, SET binding factor 2, [Score=363, Expect=6e-103]} {Dmel: FBgn0025802, Sbf, SET domain binding factor, [Score=252, Expect=2e-67]} {Celegans: WBGene00003477, mtm-5, Myotubularin-related protein 5, [RH, Score=152, Expect=9e-37]} {Smed: dd_Smed_v6_7244_0_4, dd_Smed_v6_7244_0_4, [Score=261, Expect=2e-70]} {RNA1509_6301} {RNA1310_675.4} {RNA815_6056} Mlig455_043950 {REF} {Length: 8369} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=244.2]; DENN (AEX-3) domain [PF02141.23, score=118.5]; Myotubularin protein [PF12335.10, score=91.3]; PH domain [PF00169.31, score=41.3]; uDENN domain [PF03456.20, score=35.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=30.1]; Pleckstrin homology domain [PF15413.8, score=22.0]} {Human: ENSG00000133812, SBF2, SET binding factor 2, [RH, Score=556, Expect=8e-164]; ENSG00000100241, SBF1, SET binding factor 1, [RH, Score=539, Expect=9e-158]} {Mouse: ENSMUSG00000038371, Sbf2, SET binding factor 2, [RH, Score=754, Expect=0.0]; ENSMUSG00000036529, Sbf1, SET binding factor 1, [RH, Score=732, Expect=0.0]} {Dmel: FBgn0025802, Sbf, SET domain binding factor, [RH, Score=546, Expect=4e-160]} {Celegans: WBGene00003477, mtm-5, Myotubularin-related protein 5, [RH, Score=147, Expect=5e-35]} {Smed: dd_Smed_v6_7244_0_1, dd_Smed_v6_7244_0_1, [RH, Score=472, Expect=1e-134]} {RNA1509_6301} {RNA1310_675.3} {RNA815_6056}
6.	MligTC455_39998	174	3.62	Mlig455_043931	Neo: - Age: - Region-enriched R2: 3.825/0.00008		0.952	-	-	0.952	-	-	-	Mlig455_043931 {REF} {Length: 847} {RNA1509_45795} {RNA1310_54772, RNA1509_45795} {RNA1509_45795, RNA815_46777}