TomoSeq data search

Data search

Results for MligTC455_17082

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_17082	29	0.60	Mlig455_052718	Neo: - Age: Up-Down-Up	USP34	Mlig455_052718 {REF} {Length: 10305} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=142.9]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=49.2]; Domain of unknown function (DUF3517) [PF12030.10, score=30.0]} {Human: ENSG00000115464, USP34, ubiquitin specific peptidase 34, [Score=996, Expect=0.0]} {Mouse: ENSMUSG00000056342, Usp34, ubiquitin specific peptidase 34, [Score=991, Expect=0.0]} {Dmel: FBgn0039214, puf, puffyeye, [RH, Score=566, Expect=1e-161]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=148, Expect=5e-35]} {Smed: dd_Smed_v6_9967_0_1, dd_Smed_v6_9967_0_1, [RH, Score=401, Expect=1e-111]} {RNA1509_58219} {RNA1310_7483.1} {RNA815_510}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17082

0.60

Mlig455_052718

Neo: -

Age: Up-Down-Up

USP34

Mlig455_052718 {REF} {Length: 10305} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=142.9]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=49.2]; Domain of unknown function (DUF3517) [PF12030.10, score=30.0]} {Human: ENSG00000115464, USP34, ubiquitin specific peptidase 34, [Score=996, Expect=0.0]} {Mouse: ENSMUSG00000056342, Usp34, ubiquitin specific peptidase 34, [Score=991, Expect=0.0]} {Dmel: FBgn0039214, puf, puffyeye, [RH, Score=566, Expect=1e-161]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=148, Expect=5e-35]} {Smed: dd_Smed_v6_9967_0_1, dd_Smed_v6_9967_0_1, [RH, Score=401, Expect=1e-111]} {RNA1509_58219} {RNA1310_7483.1} {RNA815_510}

Cumulative graph for MligTC455_17082

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.166	1.132	0.99987	1.00000
RegionR2	1.301	1.132	0.22884	0.60068
RegionR3	-0.809	1.132	0.99987	1.00000
RegionR4	0.292	1.132	0.99980	1.00000
RegionR5	-0.485	1.132	0.99986	1.00000
RegionR6	0.689	1.132	0.34558	0.93154
RegionR7	-0.836	1.132	0.99989	1.00000
RegionR8	-0.318	1.132	0.99990	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.16	1.132	0.99999	1.00000
RegenerationR2	-0.607	1.132	0.59494	0.91325
RegenerationR3	2.734	1.132	0.13024	0.55332
RegenerationR4	3.439	1.132	0.01838	0.21257
RegenerationR5	4.199	1.132	0.00488	0.12682
RegenerationR6	1.955	1.132	0.26348	0.61330
RegenerationBL	-0.587	1.132	0.87729	1.00000
RegenerationTP	3.612	1.132	0.20158	0.64327

Genes with expression patterns similar to MligTC455_17082

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17082	29	0.6	Mlig455_052718	Neo: - Age: Up-Down-Up	USP34	3	-	-	-	1.000	1.000	1.000	Mlig455_052718 {REF} {Length: 10305} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=142.9]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=49.2]; Domain of unknown function (DUF3517) [PF12030.10, score=30.0]} {Human: ENSG00000115464, USP34, ubiquitin specific peptidase 34, [Score=996, Expect=0.0]} {Mouse: ENSMUSG00000056342, Usp34, ubiquitin specific peptidase 34, [Score=991, Expect=0.0]} {Dmel: FBgn0039214, puf, puffyeye, [RH, Score=566, Expect=1e-161]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=148, Expect=5e-35]} {Smed: dd_Smed_v6_9967_0_1, dd_Smed_v6_9967_0_1, [RH, Score=401, Expect=1e-111]} {RNA1509_58219} {RNA1310_7483.1} {RNA815_510}
2.	MligTC455_14413	67	1.4	Mlig455_065935	Neo: - Age: logFC(26M/2M)=1.730	SPDEF	0.992	-	-	-	-	0.992	-	Mlig455_065935 {REF} {Length: 1412} {Pfam: Ets-domain [PF00178.24, score=67.7]} {Human: ENSG00000124664, SPDEF, SAM pointed domain containing ETS transcription factor, [Score=60.8, Expect=8e-10]} {Mouse: ENSMUSG00000024215, Spdef, SAM pointed domain containing ets transcription factor, [Score=60.1, Expect=9e-10]} {Dmel: FBgn0005659, Ets98B, Ets at 98B, [Score=61.2, Expect=4e-10]} {Celegans: WBGene00017687, ets-4, Transcription factor ets-4, [Score=59.7, Expect=8e-10]} {Smed: dd_Smed_v6_6015_0_1, dd_Smed_v6_6015_0_1, [Score=75.1, Expect=5e-15]} {RNA1509_24111} {RNA1310_27105} {RNA815_11814.1}
3.	MligTC455_24123	22	0.47	Mlig455_007513	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.757 Region-enriched R2: 7.346/0.02478		0.965	-	-	-	-	0.965	-	Mlig455_007513 {REF} {Length: 3055} {RNA1509_58583} {RNA1310_32574} {RNA815_21268}
4.	MligTC455_19686	199	4.15	Mlig455_037617	Neo: Int S/G2/M Age: Down-Up-Down	CCNQ	0.964	-	-	-	0.964	-	-	Mlig455_037617 {REF} {Length: 2073} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=29.6]} {Human: ENSG00000262919, CCNQ, cyclin Q, [RH, Score=126, Expect=1e-35]} {Mouse: ENSMUSG00000049489, Ccnq, cyclin Q, [RH, Score=126, Expect=2e-35]} {Dmel: FBgn0040394, CG16903, [Score=65.5, Expect=3e-12]} {Smed: dd_Smed_v6_9138_0_3, dd_Smed_v6_9138_0_3, [RH, Score=106, Expect=2e-28]} {RNA1509_34677} {RNA1310_40105.1} {RNA815_11835}
5.	MligTC455_39529	321	6.7	Mlig455_049164	Neo: Int S/G2/M Age: Up-Up-Down		0.956	-	-	-	0.956	-	-	Mlig455_049164 {REF} {Length: 599} {RNA1509_56447} {RNA1310_77158, RNA1509_56447} {RNA1509_56447, RNA815_48470}