TomoSeq data search

Data search

Results for MligTC455_17099

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17099

12255

255.31

Mlig455_018426, Mlig455_018429

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.181

Region-enriched R4: 1.130/0.00002

Regeneration-upregulated BL: 1.519

Regeneration-enriched BL: 1.519

CCT2

Mlig455_018426 {REF} {Length: 2212} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=402.7]} {Human: ENSG00000166226, CCT2, chaperonin containing TCP1 subunit 2, [Score=662, Expect=0.0]} {Mouse: ENSMUSG00000034024, Cct2, chaperonin containing Tcp1, subunit 2 (beta), [Score=663, Expect=0.0]} {Dmel: FBgn0030086, CCT2, Chaperonin containing TCP1 subunit 2, [Score=677, Expect=0.0]} {Celegans: WBGene00000378, cct-2, T-complex protein 1 subunit beta, [Score=641, Expect=0.0]} {Smed: dd_Smed_v6_525_0_1, dd_Smed_v6_525_0_1, [Score=694, Expect=0.0]} {RNA1509_30584, RNA1509_52064, RNA1509_7975, RNA1509_905} {RNA1310_11023, RNA1509_30584, RNA1509_52064, RNA1509_7975} {RNA1509_30584, RNA1509_52064, RNA1509_7975, RNA815_1945.1}

Mlig455_018429 {REF} {Length: 2234} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=480.2]} {Human: ENSG00000166226, CCT2, chaperonin containing TCP1 subunit 2, [RH, Score=768, Expect=0.0]} {Mouse: ENSMUSG00000034024, Cct2, chaperonin containing Tcp1, subunit 2 (beta), [RH, Score=769, Expect=0.0]} {Dmel: FBgn0030086, CCT2, Chaperonin containing TCP1 subunit 2, [RH, Score=777, Expect=0.0]} {Celegans: WBGene00000378, cct-2, T-complex protein 1 subunit beta, [RH, Score=717, Expect=0.0]} {Smed: dd_Smed_v6_525_0_1, dd_Smed_v6_525_0_1, [RH, Score=798, Expect=0.0]} {RNA1509_21969, RNA1509_26762, RNA1509_29386, RNA1509_905} {RNA1310_11023, RNA1509_21969, RNA1509_26762, RNA1509_29386, RNA1509_905} {RNA1509_21969, RNA1509_26762, RNA1509_29386, RNA1509_905, RNA815_1945.1}

Cumulative graph for MligTC455_17099

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.257	8.04	0.49329	1.00000
RegionR2	-0.236	8.04	0.31609	0.70687
RegionR3	-0.138	8.04	0.49211	0.99005
RegionR4	1.13	8.04	0.00000	0.00002
RegionR5	0.949	8.04	0.00000	0.00001
RegionR6	0.188	8.04	0.34308	0.93037
RegionR7	-0.597	8.04	0.00921	0.16295
RegionR8	-1.038	8.04	0.00022	0.01506

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.076	8.04	0.87509	1.00000
RegenerationR2	0.393	8.04	0.10149	0.50254
RegenerationR3	0.463	8.04	0.06410	0.42681
RegenerationR4	-0.084	8.04	0.74249	0.96827
RegenerationR5	-0.185	8.04	0.44393	0.82695
RegenerationR6	0.836	8.04	0.00068	0.02779
RegenerationBL	1.519	8.04	0.00000	0.00000	Specific for BL: 1.519
RegenerationTP	0.945	8.04	0.00021	0.01871

Genes with expression patterns similar to MligTC455_17099

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17099	12255	255.31	Mlig455_018426, Mlig455_018429	Neo: Int S/G2/M Age: logFC(26M/2M)=0.181 Region-enriched R4: 1.130/0.00002 Regeneration-upregulated BL: 1.519 Regeneration-enriched BL: 1.519	CCT2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018426 {REF} {Length: 2212} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=402.7]} {Human: ENSG00000166226, CCT2, chaperonin containing TCP1 subunit 2, [Score=662, Expect=0.0]} {Mouse: ENSMUSG00000034024, Cct2, chaperonin containing Tcp1, subunit 2 (beta), [Score=663, Expect=0.0]} {Dmel: FBgn0030086, CCT2, Chaperonin containing TCP1 subunit 2, [Score=677, Expect=0.0]} {Celegans: WBGene00000378, cct-2, T-complex protein 1 subunit beta, [Score=641, Expect=0.0]} {Smed: dd_Smed_v6_525_0_1, dd_Smed_v6_525_0_1, [Score=694, Expect=0.0]} {RNA1509_30584, RNA1509_52064, RNA1509_7975, RNA1509_905} {RNA1310_11023, RNA1509_30584, RNA1509_52064, RNA1509_7975} {RNA1509_30584, RNA1509_52064, RNA1509_7975, RNA815_1945.1} Mlig455_018429 {REF} {Length: 2234} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=480.2]} {Human: ENSG00000166226, CCT2, chaperonin containing TCP1 subunit 2, [RH, Score=768, Expect=0.0]} {Mouse: ENSMUSG00000034024, Cct2, chaperonin containing Tcp1, subunit 2 (beta), [RH, Score=769, Expect=0.0]} {Dmel: FBgn0030086, CCT2, Chaperonin containing TCP1 subunit 2, [RH, Score=777, Expect=0.0]} {Celegans: WBGene00000378, cct-2, T-complex protein 1 subunit beta, [RH, Score=717, Expect=0.0]} {Smed: dd_Smed_v6_525_0_1, dd_Smed_v6_525_0_1, [RH, Score=798, Expect=0.0]} {RNA1509_21969, RNA1509_26762, RNA1509_29386, RNA1509_905} {RNA1310_11023, RNA1509_21969, RNA1509_26762, RNA1509_29386, RNA1509_905} {RNA1509_21969, RNA1509_26762, RNA1509_29386, RNA1509_905, RNA815_1945.1}
2.	MligTC455_27877	14566	303.46	Mlig455_046947, Mlig455_068943	Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.337 Regeneration-enriched BL: 1.337	DDX39B	1.871	-	-	-	-	0.906	0.965	Mlig455_046947 {REF} {Length: 1705} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.2]; Helicase conserved C-terminal domain [PF00271.33, score=92.8]; U3-containing 90S pre-ribosomal complex subunit [PF14617.8, score=33.4]; Type III restriction enzyme, res subunit [PF04851.17, score=29.8]} {Human: ENSG00000225859, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000235439, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000215425, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000225073, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000198563, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000229496, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000230624, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000123136, DDX39A, DExD-box helicase 39A, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000019432, Ddx39b, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B, [RH, Score=716, Expect=0.0]; ENSMUSG00000005481, Ddx39, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, [RH, Score=703, Expect=0.0]} {Dmel: FBgn0014189, Hel25E, Helicase at 25E, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001840, hel-1, Spliceosome RNA helicase DDX39B homolog, [RH, Score=654, Expect=0.0]} {Smed: dd_Smed_v6_724_0_1, dd_Smed_v6_724_0_1, [RH, Score=713, Expect=0.0]} {RNA1509_632} {RNA1310_17749} {RNA815_6753} Mlig455_068943 {REF} {Length: 1704} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.2]; Helicase conserved C-terminal domain [PF00271.33, score=92.8]; U3-containing 90S pre-ribosomal complex subunit [PF14617.8, score=33.4]; Type III restriction enzyme, res subunit [PF04851.17, score=29.8]} {Human: ENSG00000225859, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000235439, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000215425, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000225073, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000198563, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000229496, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000230624, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000123136, DDX39A, DExD-box helicase 39A, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000019432, Ddx39b, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B, [RH, Score=716, Expect=0.0]; ENSMUSG00000005481, Ddx39, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, [RH, Score=703, Expect=0.0]} {Dmel: FBgn0014189, Hel25E, Helicase at 25E, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001840, hel-1, Spliceosome RNA helicase DDX39B homolog, [RH, Score=654, Expect=0.0]} {Smed: dd_Smed_v6_724_0_1, dd_Smed_v6_724_0_1, [RH, Score=713, Expect=0.0]} {RNA1509_632} {RNA1310_17749, RNA1509_632} {RNA1509_632, RNA815_6753}
3.	MligTC455_53241	843	17.55	Mlig455_042246, Mlig455_047087	Neo: Germline Age: Up-Down-Down Region-specific R4: 2.703 Region-enriched R4: 2.353/0.00081		0.976	-	-	-	-	0.976	-	Mlig455_042246 {REF} {Length: 3748} {TRANSSPLICED} {RNA1509_11212} {RNA1310_3043.1} {RNA815_7288} Mlig455_047087 {REF} {Length: 4185} {TRANSSPLICED} {RNA1509_11212} {RNA1310_3043.1} {RNA815_7288}
4.	MligTC455_18285	1407	29.3	Mlig455_045025	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.279	XPO1	0.963	-	-	-	-	-	0.963	Mlig455_045025 {REF} {Length: 3780} {TRANSSPLICED} {Pfam: CRM1 C terminal [PF08767.13, score=351.6]; Exportin 1-like protein [PF08389.14, score=134.1]; CRM1 / Exportin repeat 2 [PF18784.3, score=119.0]; CRM1 / Exportin repeat 3 [PF18787.3, score=96.9]; Chromosome region maintenance or exportin repeat [PF18777.3, score=62.4]; Importin-beta N-terminal domain [PF03810.21, score=49.9]} {Human: ENSG00000082898, XPO1, exportin 1, [RH, Score=1457, Expect=0.0]} {Mouse: ENSMUSG00000020290, Xpo1, exportin 1, [RH, Score=1454, Expect=0.0]} {Dmel: FBgn0020497, emb, embargoed, [RH, Score=1289, Expect=0.0]} {Celegans: WBGene00002078, xpo-1, EXPOrtin (Nuclear export receptor), [RH, Score=1025, Expect=0.0]} {Smed: dd_Smed_v6_3264_0_1, dd_Smed_v6_3264_0_1, [RH, Score=1411, Expect=0.0]} {RNA1509_19750, RNA1509_1988, RNA1509_20718} {RNA1310_2868, RNA1509_19750, RNA1509_1988, RNA1509_20718} {RNA1509_19750, RNA1509_1988, RNA1509_20718, RNA815_846}
5.	MligTC455_41446	6563	136.73	Mlig455_018013	Neo: Int S/G2/M Age: logFC(26M/2M)=0.461 Region-enriched R5: 1.139/0.00263	MANF	0.951	-	-	-	-	-	0.951	Mlig455_018013 {REF} {Length: 1908} {Pfam: ARMET, N-terminal [PF20145.1, score=136.0]; ARMET, C-terminal [PF10208.11, score=77.2]} {Human: ENSG00000145050, MANF, mesencephalic astrocyte derived neurotrophic factor, [RH, Score=172, Expect=9e-55]} {Mouse: ENSMUSG00000032575, Manf, mesencephalic astrocyte-derived neurotrophic factor, [RH, Score=172, Expect=6e-55]} {Dmel: FBgn0027095, Manf, Mesencephalic astrocyte-derived neurotrophic factor, [RH, Score=193, Expect=2e-63]} {Celegans: WBGene00021888, Y54G2A.23, MANF/CDNF-like protein, [RH, Score=155, Expect=1e-48]} {Smed: dd_Smed_v6_1797_0_1, dd_Smed_v6_1797_0_1, [RH, Score=223, Expect=2e-75]} {RNA1509_2921, RNA1509_45723} {RNA1310_28818, RNA1509_2921, RNA1509_45723} {RNA1509_2921, RNA1509_45723, RNA815_12938}

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