Data search
Results for MligTC455_17116
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17116 | 240 | 4.99 | Mlig455_025788, Mlig455_064365, Mlig455_064389 | Neo: - Age: logFC(26M/2M)=0.273 |
Mlig455_025788 {REF} {Length: 4682} {TRANSSPLICED} {RNA1509_17357} {RNA1310_3677} {RNA815_32183} Mlig455_064365 {REF} {Length: 4710} {TRANSSPLICED} {RNA1509_17357, RNA1509_49140} {RNA1310_3677, RNA1509_17357, RNA1509_49140} {RNA1509_17357, RNA1509_49140, RNA815_32183} Mlig455_064389 {REF} {Length: 4684} {TRANSSPLICED} {RNA1509_17357} {RNA1310_3677} {RNA815_32183} |
Cumulative graph for MligTC455_17116
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 4.923 | 3.056 | 0.00920 | 0.28337 | |
| RegionR2 | -1.239 | 3.056 | 0.99028 | 1.00000 | |
| RegionR3 | 0.18 | 3.056 | 0.71685 | 1.00000 | |
| RegionR4 | 2.868 | 3.056 | 0.00872 | 0.05510 | |
| RegionR5 | 1.267 | 3.056 | 0.08324 | 0.26929 | |
| RegionR6 | -0.584 | 3.056 | 0.94942 | 1.00000 | |
| RegionR7 | -0.27 | 3.056 | 0.89877 | 1.00000 | |
| RegionR8 | -7.146 | 3.056 | 0.00572 | 0.13691 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.236 | 3.056 | 0.05568 | 0.71415 | |
| RegenerationR2 | 0.75 | 3.056 | 0.29076 | 0.73367 | |
| RegenerationR3 | -0.288 | 3.056 | 0.70080 | 0.94777 | |
| RegenerationR4 | -1.082 | 3.056 | 0.22848 | 0.67756 | |
| RegenerationR5 | 0.016 | 3.056 | 0.99797 | 1.00000 | |
| RegenerationR6 | 0.758 | 3.056 | 0.35332 | 0.69841 | |
| RegenerationBL | -2.791 | 3.056 | 0.99988 | 1.00000 | |
| RegenerationTP | 2.883 | 3.056 | 0.14773 | 0.57145 |
Genes with expression patterns similar to MligTC455_17116
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17116 | 240 | 4.99 | Mlig455_025788, Mlig455_064365, Mlig455_064389 | Neo: - Age: logFC(26M/2M)=0.273 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_025788 {REF} {Length: 4682} {TRANSSPLICED} {RNA1509_17357} {RNA1310_3677} {RNA815_32183} Mlig455_064365 {REF} {Length: 4710} {TRANSSPLICED} {RNA1509_17357, RNA1509_49140} {RNA1310_3677, RNA1509_17357, RNA1509_49140} {RNA1509_17357, RNA1509_49140, RNA815_32183} Mlig455_064389 {REF} {Length: 4684} {TRANSSPLICED} {RNA1509_17357} {RNA1310_3677} {RNA815_32183} |
|
| 2. | MligTC455_52419 | 214 | 4.46 | Mlig455_036527 | Neo: Irradiation Age: Down-Down-Up Region-enriched R5: 4.262/0.00000 |
1.751 | - | - | - | - | 0.800 | 0.951 | Mlig455_036527 {REF} {Length: 2552} {Smed: dd_Smed_v6_2845_0_1, dd_Smed_v6_2845_0_1, [RH, Score=47.8, Expect=2e-07]} {RNA1509_3969} {RNA1310_16554, RNA1509_3969} {RNA1509_3969, RNA815_8939} | |
| 3. | MligTC455_47245 | 73 | 1.52 | Mlig455_027393 | Neo: - Age: - |
1.733 | - | - | 0.781 | - | - | 0.952 | Mlig455_027393 {REF} {Length: 1984} {Dmel: FBgn0034267, CG4984, [Score=52.4, Expect=1e-07]} {RNA1310_36758} {RNA815_27905} | |
| 4. | MligTC455_20637 | 195 | 4.06 | Mlig455_053578 | Neo: - Age: - |
ANKRD20A1 | 1.694 | 0.736 | - | - | - | - | 0.958 | Mlig455_053578 {REF} {Length: 2553} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=66.0]; Ankyrin repeats (many copies) [PF13637.8, score=48.2]; Ankyrin repeat [PF13606.8, score=46.3]; Ankyrin repeat [PF00023.32, score=38.2]; Ankyrin repeats (many copies) [PF13857.8, score=33.7]} {Human: ENSG00000260691, ANKRD20A1, ankyrin repeat domain 20 family member A1, [Score=53.9, Expect=6e-07]; ENSG00000172014, ANKRD20A4, ankyrin repeat domain 20 family member A4, [Score=53.5, Expect=8e-07]; ENSG00000276203, ANKRD20A3, ankyrin repeat domain 20 family member A3, [Score=53.5, Expect=8e-07]; ENSG00000183148, ANKRD20A2, ankyrin repeat domain 20 family member A2, [Score=53.1, Expect=9e-07]} {Mouse: ENSMUSG00000022246, Rai14, retinoic acid induced 14, [Score=51.6, Expect=2e-06]; ENSMUSG00000020305, Asb3, ankyrin repeat and SOCS box-containing 3, [Score=50.8, Expect=3e-06]; ENSMUSG00000038354, Ankrd35, ankyrin repeat domain 35, [Score=50.4, Expect=5e-06]} {Smed: dd_Smed_v6_13360_0_1, dd_Smed_v6_13360_0_1, [Score=54.7, Expect=1e-07]} {RNA1509_20046} {RNA1310_5880} {RNA815_2904.1} |
| 5. | MligTC455_40393 | 91 | 1.9 | Mlig455_012551 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.507/0.01164 |
TCF7L2 | 1.679 | - | 0.721 | - | - | - | 0.958 | Mlig455_012551 {REF} {Length: 2318} {TRANSSPLICED} {tRNA: Ile(GAT), score=81.2} {Pfam: HMG (high mobility group) box [PF00505.21, score=66.1]; HMG-box domain [PF09011.12, score=35.4]} {Human: ENSG00000148737, TCF7L2, transcription factor 7 like 2, [Score=150, Expect=2e-40]; ENSG00000081059, TCF7, transcription factor 7, [Score=148, Expect=6e-40]} {Mouse: ENSMUSG00000024985, Tcf7l2, transcription factor 7 like 2, T cell specific, HMG box, [Score=147, Expect=5e-39]} {Dmel: FBgn0085432, pan, pangolin, [Score=138, Expect=9e-36]} {Celegans: WBGene00004077, pop-1, [Score=92.8, Expect=1e-20]} {Smed: dd_Smed_v6_8152_0_1, dd_Smed_v6_8152_0_1, [Score=149, Expect=8e-40]} {RNA1509_34060} {RNA1310_5266.1} {RNA815_5301.1} |
| 6. | MligTC455_35311 | 284 | 5.92 | Mlig455_030358 | Neo: Irradiation |
NUP50 | 1.66 | - | 0.703 | 0.957 | - | - | - | Mlig455_030358 {REF} {Length: 2323} {TRANSSPLICED} {Pfam: NUP50 (Nucleoporin 50 kDa) [PF08911.13, score=63.2]; RanBP1 domain [PF00638.20, score=43.4]} {Human: ENSG00000093000, NUP50, nucleoporin 50, [RH, Score=198, Expect=2e-57]} {Mouse: ENSMUSG00000016619, Nup50, nucleoporin 50, [RH, Score=102, Expect=5e-23]} {Dmel: FBgn0033264, Nup50, Nucleoporin 50kD, [RH, Score=174, Expect=6e-48]} {Smed: dd_Smed_v6_5140_0_1, dd_Smed_v6_5140_0_1, [RH, Score=175, Expect=4e-50]} {RNA1509_25929, RNA1509_9756} {RNA1310_9766, RNA1509_25929, RNA1509_9756} {RNA1509_25929, RNA1509_9756, RNA815_6757} |
| 7. | MligTC455_25449 | 177 | 3.68 | Mlig455_021524 | Neo: - Age: - |
0.975 | - | - | - | - | - | 0.975 | Mlig455_021524 {REF} {Length: 2635} {RNA1509_40847} {RNA1310_18681} {RNA815_9684} | |
| 8. | MligTC455_06277 | 57 | 1.19 | Mlig455_021810 | Neo: - Age: - |
0.968 | - | - | - | 0.968 | - | - | Mlig455_021810 {REF} {Length: 657} {Smed: dd_Smed_v6_14814_0_1, dd_Smed_v6_14814_0_1, [RH, Score=94.0, Expect=2e-25]} {RNA1310_38198} {RNA815_26965} | |
| 9. | MligTC455_06466 | 61 | 1.27 | Mlig455_023837 | Neo: - Age: - |
RNF44 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_023837 {REF} {Length: 2513} {Pfam: Ring finger domain [PF13639.8, score=43.6]; RING-H2 zinc finger domain [PF12678.9, score=31.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=29.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.6]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=26.2]; Prokaryotic RING finger family 1 [PF14446.8, score=25.7]; zinc-RING finger domain [PF14634.8, score=25.5]; RING-like zinc finger [PF17123.7, score=24.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.3]} {Human: ENSG00000146083, RNF44, ring finger protein 44, [Score=51.2, Expect=2e-07]; ENSG00000137075, RNF38, ring finger protein 38, [Score=50.4, Expect=5e-07]; ENSG00000183763, TRAIP, TRAF interacting protein, [Score=50.1, Expect=6e-07]; ENSG00000163162, RNF149, ring finger protein 149, [Score=49.7, Expect=8e-07]; ENSG00000170153, RNF150, ring finger protein 150, [Score=49.7, Expect=7e-07]} {Mouse: ENSMUSG00000035696, Rnf38, ring finger protein 38, [Score=51.2, Expect=2e-07]; ENSMUSG00000032586, Traip, TRAF-interacting protein, [Score=50.1, Expect=4e-07]; ENSMUSG00000034928, Rnf44, ring finger protein 44, [Score=50.1, Expect=4e-07]; ENSMUSG00000047747, Rnf150, ring finger protein 150, [Score=49.7, Expect=7e-07]; ENSMUSG00000048234, Rnf149, ring finger protein 149, [Score=49.7, Expect=6e-07]} {Dmel: FBgn0037705, mura, murashka, [Score=50.1, Expect=4e-07]} {Celegans: WBGene00017144, brap-2, BRCA1-associated protein homolog 2, [Score=45.1, Expect=1e-05]} {Smed: dd_Smed_v6_7396_0_1, dd_Smed_v6_7396_0_1, [Score=48.5, Expect=7e-07]} {RNA1509_59869} {RNA1310_85762} |
| 10. | MligTC455_53338 | 60 | 1.24 | Mlig455_007528 | Neo: - Age: - |
0.959 | - | - | 0.959 | - | - | - | Mlig455_007528 {REF} {Length: 3490} {Pfam: Immunoglobulin domain [PF13895.8, score=37.0]; Immunoglobulin domain [PF13927.8, score=23.5]} {RNA1509_58583} {RNA1310_50684.1} {RNA815_25388} | |
| 11. | MligTC455_35414 | 1626 | 33.89 | Mlig455_066970 | Neo: - |
TXNDC17 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_066970 {REF} {Length: 1241} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF953) [PF06110.13, score=100.0]; Thioredoxin [PF00085.22, score=21.1]} {Human: ENSG00000129235, TXNDC17, thioredoxin domain containing 17, [RH, Score=68.2, Expect=3e-15]} {Mouse: ENSMUSG00000020803, Txndc17, thioredoxin domain containing 17, [Score=69.7, Expect=6e-16]} {Dmel: FBgn0040396, CG3939, [RH, Score=62.0, Expect=6e-13]} {Celegans: WBGene00022188, Y71H2AR.1, [RH, Score=57.8, Expect=1e-11]} {Smed: dd_Smed_v6_2482_0_1, dd_Smed_v6_2482_0_1, [RH, Score=85.9, Expect=2e-22]} {RNA1509_10015, RNA1509_36663} {RNA1310_27877, RNA1509_10015, RNA1509_36663} {RNA1509_10015, RNA1509_36663, RNA815_12108} |
| 12. | MligTC455_15191 | 126 | 2.62 | Mlig455_022103 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.015 Region-enriched R4: 3.011/0.00438 |
RAB26 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_022103 {REF} {Length: 2985} {Pfam: Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=54.9]; Ras family [PF00071.24, score=42.7]; AAA domain [PF13401.8, score=20.9]} {Human: ENSG00000167964, RAB26, RAB26, member RAS oncogene family, [Score=51.2, Expect=8e-07]; ENSG00000144134, RABL2A, RAB, member of RAS oncogene family like 2A, [Score=49.7, Expect=2e-06]} {Mouse: ENSMUSG00000022621, Rabl2, RAB, member RAS oncogene family-like 2, [Score=53.5, Expect=6e-08]} {Dmel: FBgn0086913, Rab26, [Score=51.6, Expect=5e-07]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=50.1, Expect=4e-07]} {Smed: dd_Smed_v6_854_0_8, dd_Smed_v6_854_0_8, [Score=49.3, Expect=5e-07]} {RNA1509_17775, RNA1509_34769} {RNA1310_15879, RNA1509_34769} {RNA1509_34769, RNA815_12961} |
| 13. | MligTC455_23317 | 6386 | 133.04 | Mlig455_030502 | Neo: - Age: logFC(26M/2M)=0.152 |
IFI30 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_030502 {REF} {Length: 1804} {Pfam: Gamma interferon inducible lysosomal thiol reductase (GILT) [PF03227.18, score=106.5]; Saposin A-type domain [PF02199.17, score=21.0]} {Human: ENSG00000216490, IFI30, IFI30, lysosomal thiol reductase, [RH, Score=142, Expect=1e-40]} {Mouse: ENSMUSG00000110777, Ifi30, interferon gamma inducible protein 30, [Score=114, Expect=4e-30]} {Dmel: FBgn0038149, GILT1, Gamma-interferon-inducible lysosomal thiol reductase 1, [RH, Score=103, Expect=2e-26]} {Celegans: WBGene00009514, F37H8.5, GILT-like protein F37H8.5, [RH, Score=110, Expect=1e-28]} {Smed: dd_Smed_v6_2024_0_1, dd_Smed_v6_2024_0_1, [RH, Score=129, Expect=1e-36]} {RNA1509_1665, RNA1509_42982, RNA1509_8932} {RNA1310_6680.2, RNA1509_1665, RNA1509_42982} {RNA1509_1665, RNA1509_42982, RNA815_10821.1} |
Berezikov Lab - 2020-2021 © ERIBA