Data search
Results for MligTC455_17341
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17341 | 1053 | 21.93 | Mlig455_042950 | Neo: - Age: - |
TCERG1 | Mlig455_042950 {REF} {Length: 7132} {Pfam: FF domain [PF01846.21, score=192.3]; Transforming acidic coiled-coil-containing protein (TACC), C-terminal [PF05010.16, score=132.0]; WW domain [PF00397.28, score=69.2]} {Human: ENSG00000113649, TCERG1, transcription elongation regulator 1, [RH, Score=413, Expect=3e-122]} {Mouse: ENSMUSG00000024498, Tcerg1, transcription elongation regulator 1 (CA150), [RH, Score=413, Expect=3e-122]} {Dmel: FBgn0261641, CG42724, [RH, Score=238, Expect=2e-63]} {Celegans: WBGene00022855, tcer-1, TransCription Elongation Regulator homolog, [RH, Score=337, Expect=1e-97]} {Smed: dd_Smed_v6_1147_0_2, dd_Smed_v6_1147_0_2, [RH, Score=286, Expect=9e-80]} {RNA1509_2708, RNA1509_50109} {RNA1310_8976, RNA1509_50109} {RNA1509_50109, RNA815_2212} |
Cumulative graph for MligTC455_17341
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.076 | 4.625 | 0.93894 | 1.00000 | |
| RegionR2 | 0.432 | 4.625 | 0.35212 | 0.74568 | |
| RegionR3 | -0.768 | 4.625 | 0.06898 | 0.46425 | |
| RegionR4 | -1.239 | 4.625 | 0.00844 | 0.05371 | |
| RegionR5 | -0.164 | 4.625 | 0.65457 | 1.00000 | |
| RegionR6 | -0.114 | 4.625 | 0.77549 | 1.00000 | |
| RegionR7 | 1.004 | 4.625 | 0.02269 | 0.28094 | |
| RegionR8 | 0.925 | 4.625 | 0.08591 | 0.55534 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.093 | 4.625 | 0.94343 | 1.00000 | |
| RegenerationR2 | 0.584 | 4.625 | 0.17361 | 0.61389 | |
| RegenerationR3 | 1.448 | 4.625 | 0.00331 | 0.10250 | |
| RegenerationR4 | 1.568 | 4.625 | 0.00145 | 0.04563 | |
| RegenerationR5 | 0.915 | 4.625 | 0.03915 | 0.32577 | |
| RegenerationR6 | 1.223 | 4.625 | 0.00795 | 0.10910 | |
| RegenerationBL | 0.855 | 4.625 | 0.05346 | 0.26732 | |
| RegenerationTP | -0.205 | 4.625 | 0.68824 | 1.00000 |
Genes with expression patterns similar to MligTC455_17341
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17341 | 1053 | 21.93 | Mlig455_042950 | Neo: - Age: - |
TCERG1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042950 {REF} {Length: 7132} {Pfam: FF domain [PF01846.21, score=192.3]; Transforming acidic coiled-coil-containing protein (TACC), C-terminal [PF05010.16, score=132.0]; WW domain [PF00397.28, score=69.2]} {Human: ENSG00000113649, TCERG1, transcription elongation regulator 1, [RH, Score=413, Expect=3e-122]} {Mouse: ENSMUSG00000024498, Tcerg1, transcription elongation regulator 1 (CA150), [RH, Score=413, Expect=3e-122]} {Dmel: FBgn0261641, CG42724, [RH, Score=238, Expect=2e-63]} {Celegans: WBGene00022855, tcer-1, TransCription Elongation Regulator homolog, [RH, Score=337, Expect=1e-97]} {Smed: dd_Smed_v6_1147_0_2, dd_Smed_v6_1147_0_2, [RH, Score=286, Expect=9e-80]} {RNA1509_2708, RNA1509_50109} {RNA1310_8976, RNA1509_50109} {RNA1509_50109, RNA815_2212} |
| 2. | MligTC455_35134 | 2559 | 53.32 | Mlig455_050482 | Neo: - Age: - |
SEC24C | 0.963 | - | - | - | 0.963 | - | - | Mlig455_050482 {REF} {Length: 5454} {Pfam: Sec23/Sec24 trunk domain [PF04811.17, score=241.2]; Sec23/Sec24 helical domain [PF04815.17, score=73.8]; Sec23/Sec24 beta-sandwich domain [PF08033.14, score=51.8]; Sec23/Sec24 zinc finger [PF04810.17, score=47.9]; Gelsolin repeat [PF00626.24, score=37.2]} {Human: ENSG00000176986, SEC24C, SEC24 homolog C, COPII coat complex component, [RH, Score=878, Expect=0.0]} {Mouse: ENSMUSG00000039367, Sec24c, Sec24 related gene family, member C (S. cerevisiae), [RH, Score=868, Expect=0.0]; ENSMUSG00000039234, Sec24d, Sec24 related gene family, member D (S. cerevisiae), [RH, Score=830, Expect=0.0]} {Dmel: FBgn0262126, Sec24CD, Secretory 24CD, [RH, Score=831, Expect=0.0]} {Celegans: WBGene00004755, sec-24.1, Yeast SEC homolog, [RH, Score=717, Expect=0.0]} {Smed: dd_Smed_v6_1764_0_1, dd_Smed_v6_1764_0_1, [RH, Score=816, Expect=0.0]} {RNA1509_41364} {RNA1310_3388.1} {RNA815_490.1} |
| 3. | MligTC455_29544 | 1846 | 38.47 | Mlig455_025882 | Neo: - Age: logFC(26M/2M)=0.204 Region-enriched R4: 1.015/0.00393 |
TM9SF3 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_025882 {REF} {Length: 4860} {TRANSSPLICED} {Pfam: Endomembrane protein 70 [PF02990.18, score=508.0]} {Human: ENSG00000077147, TM9SF3, transmembrane 9 superfamily member 3, [RH, Score=827, Expect=0.0]} {Mouse: ENSMUSG00000025016, Tm9sf3, transmembrane 9 superfamily member 3, [RH, Score=826, Expect=0.0]} {Dmel: FBgn0035622, TM9SF3, Transmembrane 9 superfamily protein member 3, [RH, Score=793, Expect=0.0]} {Celegans: WBGene00021506, Y41D4A.4, Transmembrane 9 superfamily member, [RH, Score=785, Expect=0.0]} {Smed: dd_Smed_v6_2737_0_1, dd_Smed_v6_2737_0_1, [RH, Score=827, Expect=0.0]} {RNA1509_15942, RNA1509_31690, RNA1509_3514} {RNA1310_11216, RNA1509_15942, RNA1509_31690, RNA1509_3514} {RNA1509_15942, RNA1509_31690, RNA1509_3514, RNA815_1966} |
| 4. | MligTC455_29545 | 2037 | 42.43 | Mlig455_062263 | Neo: - Age: - |
TM9SF3 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_062263 {REF} {Length: 7019} {TRANSSPLICED} {Pfam: Endomembrane protein 70 [PF02990.18, score=509.8]} {Human: ENSG00000077147, TM9SF3, transmembrane 9 superfamily member 3, [RH, Score=828, Expect=0.0]} {Mouse: ENSMUSG00000025016, Tm9sf3, transmembrane 9 superfamily member 3, [RH, Score=827, Expect=0.0]} {Dmel: FBgn0035622, TM9SF3, Transmembrane 9 superfamily protein member 3, [RH, Score=794, Expect=0.0]} {Celegans: WBGene00021506, Y41D4A.4, Transmembrane 9 superfamily member, [RH, Score=786, Expect=0.0]} {Smed: dd_Smed_v6_2737_0_1, dd_Smed_v6_2737_0_1, [RH, Score=825, Expect=0.0]} {RNA1509_28068, RNA1509_3514, RNA1509_54663} {RNA1310_11216, RNA1509_28068, RNA1509_54663} {RNA1509_28068, RNA1509_54663, RNA815_1966} |
| 5. | MligTC455_40100 | 2423 | 50.49 | Mlig455_051103 | Neo: - Age: logFC(26M/2M)=0.349 |
G3BP2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_051103 {REF} {Length: 2299} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=85.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.3]} {Human: ENSG00000138757, G3BP2, G3BP stress granule assembly factor 2, [RH, Score=162, Expect=4e-44]} {Mouse: ENSMUSG00000029405, G3bp2, GTPase activating protein (SH3 domain) binding protein 2, [RH, Score=163, Expect=2e-44]} {Dmel: FBgn0015778, rin, rasputin, [RH, Score=141, Expect=7e-36]} {Celegans: WBGene00010677, gtbp-1, Ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein, [Score=58.9, Expect=4e-09]} {Smed: dd_Smed_v6_316_0_1, dd_Smed_v6_316_0_1, [RH, Score=132, Expect=5e-34]} {RNA1509_13395, RNA1509_30888, RNA1509_3175, RNA1509_37734, RNA1509_48256} {RNA1310_10257, RNA1509_13395, RNA1509_30888, RNA1509_3175, RNA1509_37734, RNA1509_48256} {RNA1509_13395, RNA1509_30888, RNA1509_3175, RNA1509_37734, RNA1509_48256, RNA815_10851} |
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