TomoSeq data search

Data search

Results for MligTC455_17422

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_17422	932	19.42	Mlig455_023597, Mlig455_068107	Neo: - Age: -	ATXN7L3	Mlig455_023597 {REF} {Length: 1600} {Pfam: Sgf11 (transcriptional regulation protein) [PF08209.13, score=54.8]} {Human: ENSG00000087152, ATXN7L3, ataxin 7 like 3, [RH, Score=77.0, Expect=3e-17]} {Mouse: ENSMUSG00000059995, Atxn7l3, ataxin 7-like 3, [RH, Score=77.0, Expect=5e-16]} {Dmel: FBgn0036804, Sgf11, SAGA associated factor 11kDa, [RH, Score=78.2, Expect=2e-17]} {Smed: dd_Smed_v6_5845_0_1, dd_Smed_v6_5845_0_1, [RH, Score=61.2, Expect=3e-11]} {RNA1509_17227} {RNA1310_21861} {RNA815_9491} Mlig455_068107 {REF} {Length: 1845} {TRANSSPLICED} {Pfam: Sgf11 (transcriptional regulation protein) [PF08209.13, score=54.4]} {Human: ENSG00000087152, ATXN7L3, ataxin 7 like 3, [RH, Score=77.8, Expect=5e-16]} {Mouse: ENSMUSG00000059995, Atxn7l3, ataxin 7-like 3, [RH, Score=77.8, Expect=4e-16]} {Dmel: FBgn0036804, Sgf11, SAGA associated factor 11kDa, [RH, Score=78.6, Expect=2e-17]} {Smed: dd_Smed_v6_5845_0_1, dd_Smed_v6_5845_0_1, [RH, Score=58.5, Expect=3e-10]} {RNA1509_17227, RNA1509_22328} {RNA1310_21861, RNA1509_17227, RNA1509_22328} {RNA1509_17227, RNA1509_22328, RNA815_9491}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17422

932

19.42

Mlig455_023597, Mlig455_068107

Neo: -

Age: -

ATXN7L3

Mlig455_023597 {REF} {Length: 1600} {Pfam: Sgf11 (transcriptional regulation protein) [PF08209.13, score=54.8]} {Human: ENSG00000087152, ATXN7L3, ataxin 7 like 3, [RH, Score=77.0, Expect=3e-17]} {Mouse: ENSMUSG00000059995, Atxn7l3, ataxin 7-like 3, [RH, Score=77.0, Expect=5e-16]} {Dmel: FBgn0036804, Sgf11, SAGA associated factor 11kDa, [RH, Score=78.2, Expect=2e-17]} {Smed: dd_Smed_v6_5845_0_1, dd_Smed_v6_5845_0_1, [RH, Score=61.2, Expect=3e-11]} {RNA1509_17227} {RNA1310_21861} {RNA815_9491}

Mlig455_068107 {REF} {Length: 1845} {TRANSSPLICED} {Pfam: Sgf11 (transcriptional regulation protein) [PF08209.13, score=54.4]} {Human: ENSG00000087152, ATXN7L3, ataxin 7 like 3, [RH, Score=77.8, Expect=5e-16]} {Mouse: ENSMUSG00000059995, Atxn7l3, ataxin 7-like 3, [RH, Score=77.8, Expect=4e-16]} {Dmel: FBgn0036804, Sgf11, SAGA associated factor 11kDa, [RH, Score=78.6, Expect=2e-17]} {Smed: dd_Smed_v6_5845_0_1, dd_Smed_v6_5845_0_1, [RH, Score=58.5, Expect=3e-10]} {RNA1509_17227, RNA1509_22328} {RNA1310_21861, RNA1509_17227, RNA1509_22328} {RNA1509_17227, RNA1509_22328, RNA815_9491}

Cumulative graph for MligTC455_17422

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.199	4.577	0.15206	0.76753
RegionR2	0.038	4.577	0.92372	1.00000
RegionR3	0.883	4.577	0.00307	0.06790
RegionR4	-0.011	4.577	0.97547	1.00000
RegionR5	0.312	4.577	0.26859	0.59249
RegionR6	0.249	4.577	0.43218	0.99536
RegionR7	0.019	4.577	0.95992	1.00000
RegionR8	-0.292	4.577	0.54482	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.026	4.577	0.07263	0.75835
RegenerationR2	0.027	4.577	0.93640	1.00000
RegenerationR3	-0.842	4.577	0.01915	0.25357
RegenerationR4	-0.365	4.577	0.32905	0.76403
RegenerationR5	-0.859	4.577	0.01265	0.19805
RegenerationR6	-0.362	4.577	0.33557	0.68170
RegenerationBL	-0.054	4.577	0.90062	1.00000
RegenerationTP	-0.087	4.577	0.85544	1.00000

Genes with expression patterns similar to MligTC455_17422

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17422	932	19.42	Mlig455_023597, Mlig455_068107	Neo: - Age: -	ATXN7L3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023597 {REF} {Length: 1600} {Pfam: Sgf11 (transcriptional regulation protein) [PF08209.13, score=54.8]} {Human: ENSG00000087152, ATXN7L3, ataxin 7 like 3, [RH, Score=77.0, Expect=3e-17]} {Mouse: ENSMUSG00000059995, Atxn7l3, ataxin 7-like 3, [RH, Score=77.0, Expect=5e-16]} {Dmel: FBgn0036804, Sgf11, SAGA associated factor 11kDa, [RH, Score=78.2, Expect=2e-17]} {Smed: dd_Smed_v6_5845_0_1, dd_Smed_v6_5845_0_1, [RH, Score=61.2, Expect=3e-11]} {RNA1509_17227} {RNA1310_21861} {RNA815_9491} Mlig455_068107 {REF} {Length: 1845} {TRANSSPLICED} {Pfam: Sgf11 (transcriptional regulation protein) [PF08209.13, score=54.4]} {Human: ENSG00000087152, ATXN7L3, ataxin 7 like 3, [RH, Score=77.8, Expect=5e-16]} {Mouse: ENSMUSG00000059995, Atxn7l3, ataxin 7-like 3, [RH, Score=77.8, Expect=4e-16]} {Dmel: FBgn0036804, Sgf11, SAGA associated factor 11kDa, [RH, Score=78.6, Expect=2e-17]} {Smed: dd_Smed_v6_5845_0_1, dd_Smed_v6_5845_0_1, [RH, Score=58.5, Expect=3e-10]} {RNA1509_17227, RNA1509_22328} {RNA1310_21861, RNA1509_17227, RNA1509_22328} {RNA1509_17227, RNA1509_22328, RNA815_9491}
2.	MligTC455_46771	871	18.15	Mlig455_001744	Neo: - Age: Down-Up-Down	ESRRB	2.623	-	-	-	0.766	0.903	0.954	Mlig455_001744 {REF} {Length: 3805} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=70.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=39.2]} {Human: ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=108, Expect=9e-25]; ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=103, Expect=3e-23]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=95.1, Expect=1e-20]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=108, Expect=4e-25]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [Score=73.9, Expect=6e-14]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=102, Expect=3e-23]} {RNA1509_17253, RNA1509_37146, RNA1509_50691} {RNA1310_13491.1, RNA1509_17253, RNA1509_50691} {RNA1509_17253, RNA1509_50691, RNA815_9073}
3.	MligTC455_31096	655	13.64	Mlig455_013922	Neo: - Age: Down-Up-Up Regeneration-upregulated R2: 2.048 Regeneration-enriched R2: 2.048		0.951	-	-	-	0.951	-	-	Mlig455_013922 {REF} {Length: 867} {RNA1509_8449} {RNA1310_47043} {RNA815_808.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_17422

932

19.42

Mlig455_023597, Mlig455_068107

Neo: -

Age: -

ATXN7L3

1.000

MligTC455_46771

871

18.15

Mlig455_001744

Neo: -

Age: Down-Up-Down

ESRRB

2.623

0.766

0.903

0.954

Mlig455_001744 {REF} {Length: 3805} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=70.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=39.2]} {Human: ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=108, Expect=9e-25]; ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=103, Expect=3e-23]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=95.1, Expect=1e-20]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=108, Expect=4e-25]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [Score=73.9, Expect=6e-14]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=102, Expect=3e-23]} {RNA1509_17253, RNA1509_37146, RNA1509_50691} {RNA1310_13491.1, RNA1509_17253, RNA1509_50691} {RNA1509_17253, RNA1509_50691, RNA815_9073}

MligTC455_31096

655

13.64

Mlig455_013922

Neo: -

Age: Down-Up-Up

Regeneration-upregulated R2: 2.048

Regeneration-enriched R2: 2.048

0.951

Mlig455_013922 {REF} {Length: 867} {RNA1509_8449} {RNA1310_47043} {RNA815_808.1}