Data search
Results for MligTC455_17430
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17430 | 240 | 4.99 | Mlig455_010013 | Neo: Int S/G2/M Age: Up-Up-Down Region-enriched R2: 2.833/0.03482 |
PPP2R2A | Mlig455_010013 {REF} {Length: 4257} {Pfam: WD domain, G-beta repeat [PF00400.34, score=44.1]} {Human: ENSG00000221914, PPP2R2A, protein phosphatase 2 regulatory subunit Balpha, [RH, Score=593, Expect=0.0]; ENSG00000175470, PPP2R2D, protein phosphatase 2 regulatory subunit Bdelta, [RH, Score=590, Expect=0.0]; ENSG00000156475, PPP2R2B, protein phosphatase 2 regulatory subunit Bbeta, [RH, Score=585, Expect=0.0]; ENSG00000074211, PPP2R2C, protein phosphatase 2 regulatory subunit Bgamma, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000022052, Ppp2r2a, protein phosphatase 2, regulatory subunit B, alpha, [RH, Score=593, Expect=0.0]; ENSMUSG00000041769, Ppp2r2d, protein phosphatase 2, regulatory subunit B, delta, [RH, Score=592, Expect=0.0]; ENSMUSG00000024500, Ppp2r2b, protein phosphatase 2, regulatory subunit B, beta, [RH, Score=572, Expect=0.0]; ENSMUSG00000029120, Ppp2r2c, protein phosphatase 2, regulatory subunit B, gamma, [RH, Score=570, Expect=0.0]} {Dmel: FBgn0004889, tws, twins, [RH, Score=580, Expect=0.0]} {Celegans: WBGene00006352, sur-6, Serine/threonine-protein phosphatase 2A regulatory subunit sur-6, [RH, Score=543, Expect=0.0]} {Smed: dd_Smed_v6_5857_0_1, dd_Smed_v6_5857_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_26565, RNA1509_40161, RNA1509_42935, RNA1509_52096} {RNA1310_5980.1, RNA1509_40161, RNA1509_42935, RNA1509_52096} {RNA1509_40161, RNA1509_42935, RNA1509_52096, RNA815_10468} |
Cumulative graph for MligTC455_17430
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.678 | 3.075 | 0.03023 | 0.44598 | |
| RegionR2 | 2.833 | 3.075 | 0.00198 | 0.03482 | |
| RegionR3 | 1.233 | 3.075 | 0.14881 | 0.65479 | |
| RegionR4 | 0.643 | 3.075 | 0.53506 | 0.85797 | |
| RegionR5 | 1.261 | 3.075 | 0.10201 | 0.30916 | |
| RegionR6 | 0.34 | 3.075 | 0.70037 | 1.00000 | |
| RegionR7 | 0.148 | 3.075 | 0.80498 | 1.00000 | |
| RegionR8 | 1.219 | 3.075 | 0.30050 | 0.93104 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.449 | 3.075 | 0.99959 | 1.00000 | |
| RegenerationR2 | 0.13 | 3.075 | 0.81682 | 0.99442 | |
| RegenerationR3 | 0.556 | 3.075 | 0.42356 | 0.81765 | |
| RegenerationR4 | -0.236 | 3.075 | 0.75841 | 0.97232 | |
| RegenerationR5 | 0.674 | 3.075 | 0.24984 | 0.68338 | |
| RegenerationR6 | 0.98 | 3.075 | 0.22737 | 0.57266 | |
| RegenerationBL | 1.322 | 3.075 | 0.17945 | 0.50839 | |
| RegenerationTP | 0.627 | 3.075 | 0.54243 | 0.92774 |
Genes with expression patterns similar to MligTC455_17430
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17430 | 240 | 4.99 | Mlig455_010013 | Neo: Int S/G2/M Age: Up-Up-Down Region-enriched R2: 2.833/0.03482 |
PPP2R2A | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_010013 {REF} {Length: 4257} {Pfam: WD domain, G-beta repeat [PF00400.34, score=44.1]} {Human: ENSG00000221914, PPP2R2A, protein phosphatase 2 regulatory subunit Balpha, [RH, Score=593, Expect=0.0]; ENSG00000175470, PPP2R2D, protein phosphatase 2 regulatory subunit Bdelta, [RH, Score=590, Expect=0.0]; ENSG00000156475, PPP2R2B, protein phosphatase 2 regulatory subunit Bbeta, [RH, Score=585, Expect=0.0]; ENSG00000074211, PPP2R2C, protein phosphatase 2 regulatory subunit Bgamma, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000022052, Ppp2r2a, protein phosphatase 2, regulatory subunit B, alpha, [RH, Score=593, Expect=0.0]; ENSMUSG00000041769, Ppp2r2d, protein phosphatase 2, regulatory subunit B, delta, [RH, Score=592, Expect=0.0]; ENSMUSG00000024500, Ppp2r2b, protein phosphatase 2, regulatory subunit B, beta, [RH, Score=572, Expect=0.0]; ENSMUSG00000029120, Ppp2r2c, protein phosphatase 2, regulatory subunit B, gamma, [RH, Score=570, Expect=0.0]} {Dmel: FBgn0004889, tws, twins, [RH, Score=580, Expect=0.0]} {Celegans: WBGene00006352, sur-6, Serine/threonine-protein phosphatase 2A regulatory subunit sur-6, [RH, Score=543, Expect=0.0]} {Smed: dd_Smed_v6_5857_0_1, dd_Smed_v6_5857_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_26565, RNA1509_40161, RNA1509_42935, RNA1509_52096} {RNA1310_5980.1, RNA1509_40161, RNA1509_42935, RNA1509_52096} {RNA1509_40161, RNA1509_42935, RNA1509_52096, RNA815_10468} |
| 2. | MligTC455_34100 | 12 | 0.25 | Mlig455_000058 | Neo: - Age: - |
0.968 | - | - | - | - | 0.968 | - | Mlig455_000058 {REF} {Length: 5641} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=114.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.8]; Integrase core domain [PF00665.28, score=39.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=34.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.3]; Aspartyl protease [PF13650.8, score=23.4]; Retroviral aspartyl protease [PF00077.22, score=20.9]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=290, Expect=8e-84]} {RNA1509_34066} {RNA1310_1125} {RNA815_25964} | |
| 3. | MligTC455_40401 | 1190 | 24.8 | Mlig455_025543, Mlig455_025561 | Neo: - Age: Down-Down-Up |
0.956 | - | - | - | - | - | 0.956 | Mlig455_025543 {REF} {Length: 2631} {TRANSSPLICED} {RNA1509_16611} {RNA1310_6273.1} {RNA815_13174} Mlig455_025561 {REF} {Length: 2890} {TRANSSPLICED} {RNA1509_16611} {RNA1310_6273.1, RNA1509_16611} {RNA1509_16611, RNA815_13174} |
Berezikov Lab - 2020-2021 © ERIBA