TomoSeq data search

Data search

Results for MligTC455_17440

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17440

269

5.59

Mlig455_022945

Neo: -

Age: -

Mlig455_022945 {REF} {Length: 788} {NoTransDecoderORF} {RNA1310_20946} {RNA815_22699.1}

Cumulative graph for MligTC455_17440

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.687	2.995	0.07960	0.61697
RegionR2	1.658	2.995	0.08016	0.34685
RegionR3	0.956	2.995	0.27739	0.82086
RegionR4	-0.022	2.995	0.86134	1.00000
RegionR5	0.71	2.995	0.42276	0.78294
RegionR6	-0.113	2.995	0.88653	1.00000
RegionR7	1.574	2.995	0.08355	0.55668
RegionR8	1.925	2.995	0.04029	0.39324

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.099	2.995	0.99986	1.00000
RegenerationR2	0.354	2.995	0.52085	0.87941
RegenerationR3	0.816	2.995	0.20278	0.63816
RegenerationR4	0.955	2.995	0.17017	0.60668
RegenerationR5	0.386	2.995	0.53076	0.87527
RegenerationR6	1.101	2.995	0.13470	0.45028
RegenerationBL	-0.181	2.995	0.83024	1.00000
RegenerationTP	-1.008	2.995	0.23032	0.67531

Genes with expression patterns similar to MligTC455_17440

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17440	269	5.59	Mlig455_022945	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_022945 {REF} {Length: 788} {NoTransDecoderORF} {RNA1310_20946} {RNA815_22699.1}
2.	MligTC455_23330	207	4.32	Mlig455_009407, Mlig455_036917	Neo: - Age: -		0.969	-	-	0.969	-	-	-	Mlig455_009407 {REF} {Length: 5394} {Pfam: Innexin [PF00876.20, score=328.1]} {Dmel: FBgn0085387, shakB, shaking B, [Score=111, Expect=1e-26]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=220, Expect=2e-67]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=315, Expect=2e-103]} {RNA1509_48973} {RNA1310_18979.1} {RNA815_25805} Mlig455_036917 {REF} {Length: 6111} {Pfam: Innexin [PF00876.20, score=327.2]} {Dmel: FBgn0085387, shakB, shaking B, [Score=110, Expect=1e-26]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=218, Expect=1e-66]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=318, Expect=9e-105]} {RNA1509_48973} {RNA1310_18979.1, RNA1509_48973} {RNA1509_48973, RNA815_25805}
3.	MligTC455_20630	49	1.03	Mlig455_015973	Neo: - Age: -	CHRND	0.968	-	-	0.968	-	-	-	Mlig455_015973 {REF} {Length: 1842} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=127.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=22.4]} {Human: ENSG00000135902, CHRND, cholinergic receptor nicotinic delta subunit, [Score=118, Expect=6e-29]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=115, Expect=5e-28]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=114, Expect=2e-27]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=114, Expect=2e-27]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=113, Expect=5e-27]} {Mouse: ENSMUSG00000026251, Chrnd, cholinergic receptor, nicotinic, delta polypeptide, [Score=117, Expect=2e-28]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=112, Expect=4e-27]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=112, Expect=4e-27]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=114, Expect=1e-27]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=123, Expect=5e-31]} {Smed: dd_Smed_v6_29533_0_1, dd_Smed_v6_29533_0_1, [Score=177, Expect=3e-51]} {RNA1310_42200} {RNA815_41928}
4.	MligTC455_39262	106	2.2	Mlig455_047835	Neo: - Age: Up-Down-Down	NALCN	0.959	-	-	0.959	-	-	-	Mlig455_047835 {REF} {Length: 7474} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=295.4]} {Human: ENSG00000102452, NALCN, sodium leak channel, non-selective, [Score=1250, Expect=0.0]} {Mouse: ENSMUSG00000000197, Nalcn, sodium leak channel, non-selective, [Score=1255, Expect=0.0]} {Dmel: FBgn0002917, na, narrow abdomen, [Score=1264, Expect=0.0]} {Celegans: WBGene00006809, unc-77, Four domain-type voltage-gated ion channel alpha-1 subunit, [Score=1012, Expect=0.0]} {Smed: dd_Smed_v6_7314_0_1, dd_Smed_v6_7314_0_1, [Score=1380, Expect=0.0]} {RNA1509_44333} {RNA1310_7866.2} {RNA815_2697}
5.	MligTC455_50731	121	2.51	Mlig455_065010	Neo: - Age: Down-Up-Down Region-enriched R7: 3.709/0.00994	TRABD2B	0.955	-	-	0.955	-	-	-	Mlig455_065010 {REF} {Length: 1805} {Pfam: TraB/PrgY/gumN family [PF01963.19, score=145.5]} {Human: ENSG00000269113, TRABD2B, TraB domain containing 2B, [RH, Score=155, Expect=3e-41]; ENSG00000186854, TRABD2A, TraB domain containing 2A, [RH, Score=153, Expect=7e-42]} {Mouse: ENSMUSG00000070867, Trabd2b, TraB domain containing 2B, [RH, Score=161, Expect=1e-43]} {Celegans: WBGene00007351, C05G5.5, Metalloprotease TIKI homolog, [RH, Score=138, Expect=3e-36]} {RNA1310_36764} {RNA815_32656}
6.	MligTC455_18377	26	0.54	Mlig455_041627	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_041627 {REF} {Length: 2273} {Pfam: Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 [PF15807.7, score=20.3]} {RNA1310_89162} {RNA815_48416}
7.	MligTC455_31764	62	1.28	Mlig455_006258	Neo: - Age: Down-Down-Up Region-enriched R8: 4.078/0.01607	LMNA	0.953	-	-	0.953	-	-	-	Mlig455_006258 {REF} {Length: 2636} {Pfam: Intermediate filament protein [PF00038.23, score=111.4]} {Human: ENSG00000160789, LMNA, lamin A/C, [Score=87.8, Expect=7e-18]; ENSG00000026025, VIM, vimentin, [Score=84.7, Expect=4e-17]} {Mouse: ENSMUSG00000028063, Lmna, lamin A, [Score=86.3, Expect=2e-17]; ENSMUSG00000026728, Vim, vimentin, [Score=85.5, Expect=2e-17]; ENSMUSG00000095241, Gm5478, predicted pseudogene 5478, [Score=82.8, Expect=2e-16]} {Dmel: FBgn0010397, LamC, Lamin C, [Score=93.6, Expect=5e-20]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [Score=165, Expect=1e-44]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [Score=190, Expect=6e-54]} {RNA1509_56508} {RNA1310_5840} {RNA815_9167}
8.	MligTC455_52432	75	1.56	Mlig455_019213	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.520		0.953	-	-	0.953	-	-	-	Mlig455_019213 {REF} {Length: 3040} {RNA1310_29981} {RNA815_46279}
9.	MligTC455_32675	168	3.49	Mlig455_029171	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_029171 {REF} {Length: 2479} {RNA1509_34477, RNA1509_6872} {RNA1310_19869.1, RNA1509_34477} {RNA1509_34477, RNA815_8634}

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