M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_17455

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17455 186 3.87 Mlig455_045214

Neo: -

Age: -

 VWA5A Mlig455_045214 {REF} {Length: 3620} {Pfam: von Willebrand factor type A domain [PF13768.8, score=33.3]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=117, Expect=1e-27]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [Score=121, Expect=6e-29]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=125, Expect=9e-31]} {RNA1509_37149} {RNA1310_4644.1} {RNA815_18958}

Cumulative graph for MligTC455_17455

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.946 2.672 0.15491 0.77251
RegionR2 1.427 2.672 0.14274 0.47041
RegionR3 0.954 2.672 0.30065 0.84241
RegionR4 1.473 2.672 0.10756 0.32280
RegionR5 1.263 2.672 0.12035 0.34720
RegionR6 0.846 2.672 0.37883 0.95907
RegionR7 0.691 2.672 0.53920 1.00000
RegionR8 -0.708 2.672 0.97466 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.096 2.672 0.99999 1.00000
RegenerationR2 -0.565 2.672 0.29077 0.73367
RegenerationR3 -0.807 2.672 0.22040 0.65686
RegenerationR4 -0.371 2.672 0.56561 0.89920
RegenerationR5 0.223 2.672 0.68514 0.94558
RegenerationR6 0.488 2.672 0.45458 0.77387
RegenerationBL -1.004 2.672 0.37993 0.74858
RegenerationTP 1.445 2.672 0.11723 0.52377


Genes with expression patterns similar to MligTC455_17455

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17455 186 3.87 Mlig455_045214

Neo: -

Age: -

 VWA5A 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_045214 {REF} {Length: 3620} {Pfam: von Willebrand factor type A domain [PF13768.8, score=33.3]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=117, Expect=1e-27]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [Score=121, Expect=6e-29]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=125, Expect=9e-31]} {RNA1509_37149} {RNA1310_4644.1} {RNA815_18958}
2. MligTC455_21469 83 1.73 Mlig455_012137

Neo: -

Age: logFC(26M/2M)=-0.260

 KCNMA1 0.969 - - 0.969 - - - Mlig455_012137 {REF} {Length: 4030} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=82.0]; Ion channel [PF07885.18, score=48.7]; Ion transport protein [PF00520.33, score=30.7]; TrkA-N domain [PF02254.20, score=28.5]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=476, Expect=2e-148]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=474, Expect=9e-148]} {Dmel: FBgn0003429, slo, slowpoke, [Score=443, Expect=3e-136]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=455, Expect=2e-141]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=479, Expect=1e-150]} {RNA1509_10617, RNA1509_22699} {RNA1310_2480.1, RNA1509_22699} {RNA1509_22699, RNA815_984.1}
3. MligTC455_16203 30 0.63 Mlig455_025342, Mlig455_025391

Neo: -

Age: -

 VAX1 0.968 - - 0.968 - - -

Mlig455_025342 {REF} {Length: 1864} {Pfam: Homeodomain [PF00046.31, score=79.6]; Homeobox KN domain [PF05920.13, score=19.0]} {Human: ENSG00000148704, VAX1, ventral anterior homeobox 1, [RH, Score=134, Expect=2e-38]} {Mouse: ENSMUSG00000006270, Vax1, ventral anterior homeobox 1, [RH, Score=134, Expect=1e-38]} {Dmel: FBgn0008646, E5, [Score=89.7, Expect=2e-21]} {Celegans: WBGene00000430, ceh-5, Homeobox protein ceh-5, [RH, Score=94.4, Expect=2e-25]} {Smed: dd_Smed_v6_56082_0_1, dd_Smed_v6_56082_0_1, [Score=79.0, Expect=5e-19]} {RNA1310_103668} {RNA815_54191}

Mlig455_025391 {REF} {Length: 2433} {Pfam: Homeodomain [PF00046.31, score=77.1]} {Human: ENSG00000148704, VAX1, ventral anterior homeobox 1, [RH, Score=135, Expect=2e-35]} {Mouse: ENSMUSG00000006270, Vax1, ventral anterior homeobox 1, [RH, Score=135, Expect=2e-35]} {Dmel: FBgn0008646, E5, [Score=90.1, Expect=6e-19]} {Celegans: WBGene00000430, ceh-5, Homeobox protein ceh-5, [Score=88.6, Expect=8e-21]} {Smed: dd_Smed_v6_56082_0_1, dd_Smed_v6_56082_0_1, [Score=79.0, Expect=5e-17]} {RNA1509_50200} {RNA1310_103668} {RNA815_54191}
4. MligTC455_25529 321 6.69 Mlig455_037673, Mlig455_037779

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.763

 0.965 - - 0.965 - - -

Mlig455_037673 {REF} {Length: 4400} {RNA1509_19526} {RNA1310_4986.1} {RNA815_14607}

Mlig455_037779 {REF} {Length: 4337} {RNA1509_19526} {RNA1310_4986.1} {RNA815_14607}
5. MligTC455_39845 141 2.94 Mlig455_002533, Mlig455_002635

Neo: -

Age: -

Region-enriched R2: 3.456/0.04589

 DLX6 0.965 - - 0.965 - - -

Mlig455_002533 {REF} {Length: 2344} {Pfam: Homeodomain [PF00046.31, score=75.8]} {Human: ENSG00000006377, DLX6, distal-less homeobox 6, [RH, Score=135, Expect=3e-36]} {Mouse: ENSMUSG00000029754, Dlx6, distal-less homeobox 6, [RH, Score=136, Expect=1e-36]} {Dmel: FBgn0000157, Dll, Distal-less, [RH, Score=135, Expect=4e-36]} {Celegans: WBGene00000463, ceh-43, Homeobox protein ceh-43, [RH, Score=107, Expect=2e-26]} {Smed: dd_Smed_v6_19040_0_1, dd_Smed_v6_19040_0_1, [RH, Score=151, Expect=9e-41]} {RNA1509_39701} {RNA1310_10459.1, RNA1509_39701} {RNA1509_39701, RNA815_21765}

Mlig455_002635 {REF} {Length: 2355} {Pfam: Homeodomain [PF00046.31, score=74.4]} {Human: ENSG00000006377, DLX6, distal-less homeobox 6, [RH, Score=135, Expect=3e-36]} {Mouse: ENSMUSG00000029754, Dlx6, distal-less homeobox 6, [RH, Score=136, Expect=1e-36]} {Dmel: FBgn0000157, Dll, Distal-less, [RH, Score=135, Expect=4e-36]} {Celegans: WBGene00000463, ceh-43, Homeobox protein ceh-43, [RH, Score=107, Expect=2e-26]} {Smed: dd_Smed_v6_19040_0_1, dd_Smed_v6_19040_0_1, [RH, Score=151, Expect=1e-40]} {RNA1509_39701} {RNA1310_10459.1} {RNA815_21765}
6. MligTC455_40585 87 1.82 Mlig455_052406, Mlig455_069786

Neo: Int S/G2/M

Age: -

 0.965 - - 0.965 - - -

Mlig455_052406 {REF} {Length: 1060} {TRANSSPLICED} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=37.7]} {RNA1509_45340} {RNA1310_16790, RNA1509_45340} {RNA1509_45340, RNA815_20038}

Mlig455_069786 {REF} {Length: 1478} {TRANSSPLICED} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=57.9]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=77.8, Expect=8e-15]} {Celegans: WBGene00013762, Y113G7B.12, [Score=77.0, Expect=8e-15]} {RNA1509_45340} {RNA1310_16790} {RNA815_20038}
7. MligTC455_42481 546 11.37 Mlig455_031077, Mlig455_031111

Neo: -

Age: -

Region-enriched R5: 1.698/0.00067

 0.965 - - - 0.965 - -

Mlig455_031077 {REF} {Length: 2233} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=31.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.2]} {RNA1509_32317} {RNA1310_9835, RNA1509_32317} {RNA1509_32317, RNA815_12931}

Mlig455_031111 {REF} {Length: 2244} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=31.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.2]} {RNA1509_32317, RNA1509_41427} {RNA1310_9835, RNA1509_41427} {RNA1509_41427, RNA815_12931}
8. MligTC455_27902 136 2.84 Mlig455_019786

Neo: -

Age: -

 KAT2B 0.963 - - 0.963 - - - Mlig455_019786 {REF} {Length: 4280} {Pfam: PCAF (P300/CBP-associated factor) N-terminal domain [PF06466.13, score=194.4]; Bromodomain [PF00439.27, score=75.9]; Acetyltransferase (GNAT) family [PF00583.27, score=26.5]} {Human: ENSG00000114166, KAT2B, lysine acetyltransferase 2B, [RH, Score=439, Expect=4e-140]; ENSG00000108773, KAT2A, lysine acetyltransferase 2A, [RH, Score=422, Expect=1e-133]} {Mouse: ENSMUSG00000000708, Kat2b, K(lysine) acetyltransferase 2B, [RH, Score=447, Expect=8e-144]} {Dmel: FBgn0020388, Gcn5, Gcn5 acetyltransferase, [RH, Score=263, Expect=3e-75]} {Celegans: WBGene00021636, pcaf-1, P300/CBP Associated Factor homolog, [RH, Score=229, Expect=2e-63]} {Smed: dd_Smed_v6_11453_0_1, dd_Smed_v6_11453_0_1, [RH, Score=426, Expect=6e-140]} {RNA1509_19153} {RNA1310_2061.1} {RNA815_10396.1}
9. MligTC455_34045 50 1.03 Mlig455_000064

Neo: -

Age: Up-Down-Down

 EIF4G3 0.963 - - 0.963 - - - Mlig455_000064 {REF} {Length: 2033} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [Score=50.8, Expect=3e-07]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [Score=52.0, Expect=1e-07]} {RNA1509_47493} {RNA1310_2285} {RNA815_8691.1}
10. MligTC455_39410 506 10.54 Mlig455_030501, Mlig455_030511

Neo: -

Age: -

Regeneration-enriched TP: 5.802
Regeneration-enriched R4: 2.875

 0.963 - - 0.963 - - -

Mlig455_030501 {REF} {Length: 4165} {RNA1509_8932} {RNA1310_6680.1} {RNA815_10821.1}

Mlig455_030511 {REF} {Length: 3074} {RNA1509_8932} {RNA1310_6680.1} {RNA815_10821.1}
11. MligTC455_40012 77 1.61 Mlig455_048982, Mlig455_048998

Neo: -

Age: -

 0.962 - - 0.962 - - -

Mlig455_048982 {REF} {Length: 1661} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=27.6]} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [RH, Score=110, Expect=1e-28]} {RNA1509_11901} {RNA1310_32645} {RNA815_18926}

Mlig455_048998 {REF} {Length: 1942} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=94.4, Expect=4e-23]} {RNA1509_11901} {RNA1310_32645} {RNA815_18926}
12. MligTC455_52728 106 2.22 Mlig455_070290

Neo: -

Age: -

 0.961 - - 0.961 - - - Mlig455_070290 {REF} {Length: 1652} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=55.7]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=18.2]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=128, Expect=4e-34]} {RNA1509_41314} {RNA1310_26265} {RNA815_9728}
13. MligTC455_18462 13 0.27 Mlig455_019446

Neo: -

Age: -

 SLC16A14 0.959 - - 0.959 - - - Mlig455_019446 {REF} {Length: 2541} {Pfam: Major Facilitator Superfamily [PF07690.18, score=101.2]} {Human: ENSG00000163053, SLC16A14, solute carrier family 16 member 14, [Score=127, Expect=8e-31]; ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=126, Expect=3e-30]; ENSG00000165449, SLC16A9, solute carrier family 16 member 9, [Score=121, Expect=2e-28]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=124, Expect=1e-29]; ENSMUSG00000026220, Slc16a14, solute carrier family 16 (monocarboxylic acid transporters), member 14, [Score=122, Expect=7e-29]} {Dmel: FBgn0023549, Mct1, Monocarboxylate transporter 1, [Score=159, Expect=4e-41]} {Celegans: WBGene00015676, mct-6, MonoCarboxylate Transporter family, [Score=124, Expect=1e-29]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=152, Expect=3e-39]} {RNA1310_57600} {RNA815_45996}
14. MligTC455_29408 45 0.94 Mlig455_038322

Neo: -

Age: -

Region-enriched R2: 8.586/0.00762

 MB 0.958 - - 0.958 - - - Mlig455_038322 {REF} {Length: 2059} {Pfam: Globin [PF00042.24, score=57.8]} {Human: ENSG00000198125, MB, myoglobin, [RH, Score=47.8, Expect=5e-07]} {Mouse: ENSMUSG00000018893, Mb, myoglobin, [RH, Score=45.4, Expect=2e-06]} {Celegans: WBGene00008996, glb-14, GLoBin related, [Score=51.6, Expect=4e-08]} {Smed: dd_Smed_v6_15997_0_1, dd_Smed_v6_15997_0_1, [RH, Score=63.5, Expect=1e-12]} {RNA1509_48898} {RNA1310_47695} {RNA815_7096.1}
15. MligTC455_35689 141 2.93 Mlig455_038912, Mlig455_038916

Neo: -

Age: -

 0.958 - - 0.958 - - -

Mlig455_038912 {REF} {Length: 2218} {TRANSSPLICED} {RNA1509_23775} {RNA1310_4560.1} {RNA815_21752}

Mlig455_038916 {REF} {Length: 895} {RNA1310_25647.1} {RNA815_12358}
16. MligTC455_40844 193 4.03 Mlig455_042195, Mlig455_059018

Neo: -

Age: -

 TRPM3 0.958 - - 0.958 - - -

Mlig455_042195 {REF} {Length: 5467} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=45.7]; Ion transport protein [PF00520.33, score=42.4]; Ankyrin repeats (3 copies) [PF12796.9, score=38.8]; Ankyrin repeats (many copies) [PF13857.8, score=35.4]; Ankyrin repeat [PF00023.32, score=28.6]; Ankyrin repeat [PF13606.8, score=25.7]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=124, Expect=6e-28]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=121, Expect=5e-27]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=121, Expect=5e-27]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=125, Expect=2e-28]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=124, Expect=5e-28]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=112, Expect=2e-24]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=77.4, Expect=5e-14]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=149, Expect=2e-36]} {RNA1509_31271} {RNA1310_12272.1} {RNA815_11306}

Mlig455_059018 {REF} {Length: 5459} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=45.7]; Ion transport protein [PF00520.33, score=42.4]; Ankyrin repeats (3 copies) [PF12796.9, score=38.8]; Ankyrin repeats (many copies) [PF13857.8, score=35.4]; Ankyrin repeat [PF00023.32, score=28.6]; Ankyrin repeat [PF13606.8, score=25.7]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=124, Expect=5e-28]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=122, Expect=4e-27]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=122, Expect=4e-27]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=125, Expect=2e-28]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=124, Expect=4e-28]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=113, Expect=9e-25]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=79.0, Expect=2e-14]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=149, Expect=2e-36]} {RNA1509_31271} {RNA1310_12272.1, RNA1509_31271} {RNA1509_31271, RNA815_11306}
17. MligTC455_40693 166 3.46 Mlig455_017943

Neo: -

Age: -

Region-enriched R2: 3.430/0.03329

 TRPM3 0.957 - - 0.957 - - - Mlig455_017943 {REF} {Length: 6086} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=111.4]; Ankyrin repeat [PF13606.8, score=75.1]; Ankyrin repeats (many copies) [PF13637.8, score=74.8]; Ankyrin repeats (many copies) [PF13857.8, score=71.1]; Ankyrin repeat [PF00023.32, score=62.4]; Ion transport protein [PF00520.33, score=27.7]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=94.4, Expect=2e-18]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=93.2, Expect=3e-18]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=90.1, Expect=2e-17]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=87.8, Expect=8e-17]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=85.5, Expect=3e-16]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [Score=105, Expect=1e-22]} {RNA1509_10217} {RNA1310_680, RNA1509_10217} {RNA1509_10217, RNA815_2721}
18. MligTC455_26600 111 2.32 Mlig455_000691

Neo: -

Age: logFC(26M/2M)=-0.305

Region-enriched R2: 4.160/0.03510

 0.954 - - 0.954 - - - Mlig455_000691 {REF} {Length: 6281} {Smed: dd_Smed_v6_17076_0_1, dd_Smed_v6_17076_0_1, [RH, Score=214, Expect=1e-56]} {RNA1509_20580} {RNA1310_21461} {RNA815_12493}
19. MligTC455_13715 49 1.03 Mlig455_000810

Neo: -

Age: Down-Up-Down

 CETN2 0.953 - - 0.953 - - - Mlig455_000810 {REF} {Length: 852} {Pfam: EF-hand domain pair [PF13499.8, score=36.4]; EF hand [PF00036.34, score=34.7]; EF-hand domain [PF13405.8, score=33.7]; EF-hand domain pair [PF13833.8, score=26.0]; EF hand [PF13202.8, score=19.9]} {Human: ENSG00000147400, CETN2, centrin 2, [Score=57.0, Expect=5e-10]; ENSG00000143933, CALM2, calmodulin 2, [Score=56.6, Expect=8e-10]; ENSG00000160014, CALM3, calmodulin 3, [Score=56.6, Expect=2e-10]; ENSG00000198668, CALM1, calmodulin 1, [Score=56.6, Expect=2e-10]; ENSG00000177143, CETN1, centrin 1, [Score=55.1, Expect=2e-09]} {Mouse: ENSMUSG00000050996, Cetn1, centrin 1, [Score=63.2, Expect=2e-12]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=58.2, Expect=5e-11]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=58.5, Expect=1e-11]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=58.2, Expect=3e-11]} {RNA1310_39411} {RNA815_27208}
20. MligTC455_26986 157 3.28 Mlig455_058044

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.496

 0.953 - - 0.953 - - - Mlig455_058044 {REF} {Length: 3183} {TRANSSPLICED} {Pfam: Diacylglycerol kinase catalytic domain [PF00781.26, score=51.3]; Ceramide kinase C-terminal domain [PF19280.1, score=22.6]} {Mouse: ENSMUSG00000075256, Cerkl, ceramide kinase-like, [Score=55.1, Expect=2e-07]} {Dmel: FBgn0037315, Cerk, Ceramide kinase, [Score=52.4, Expect=1e-06]} {RNA1509_33630, RNA1509_39108} {RNA1310_4577, RNA1509_33630, RNA1509_39108} {RNA1509_33630, RNA1509_39108, RNA815_1173}
21. MligTC455_37753 410 8.54 Mlig455_054901, Mlig455_065604

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.475

Region-enriched R2: 4.050/0.00069

 0.953 - - 0.953 - - -

Mlig455_054901 {REF} {Length: 2445} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=23.2]} {Celegans: WBGene00010315, F59B2.13, Putative G-protein coupled receptor F59B2.13, [RH, Score=58.5, Expect=6e-09]} {Smed: dd_Smed_v6_28468_0_1, dd_Smed_v6_28468_0_1, [Score=88.6, Expect=1e-18]} {RNA1509_30384} {RNA1310_34563.1} {RNA815_18979}

Mlig455_065604 {REF} {Length: 2387} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.9]} {Celegans: WBGene00010315, F59B2.13, Putative G-protein coupled receptor F59B2.13, [Score=55.1, Expect=9e-08]} {Smed: dd_Smed_v6_28468_0_1, dd_Smed_v6_28468_0_1, [Score=85.5, Expect=2e-17]} {RNA1509_30384} {RNA1310_34563.1} {RNA815_18979}
22. MligTC455_45147 83 1.72 Mlig455_030535

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_030535 {REF} {Length: 2558} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=23.2]} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=92.0, Expect=8e-22]} {RNA1509_45032} {RNA1310_21981} {RNA815_16677}
23. MligTC455_17804 27 0.56 Mlig455_069447

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_069447 {REF} {Length: 955} {RNA1310_40722} {RNA815_46396}
24. MligTC455_19812 192 3.99 Mlig455_017616

Neo: -

Age: -

 0.951 - - 0.951 - - - Mlig455_017616 {REF} {Length: 579} {TRANSSPLICED} {RNA1509_45712} {RNA1310_38057.2} {RNA815_23034.1}
25. MligTC455_37602 11 0.23 Mlig455_049973

Neo: -

Age: Up-Down-Down

 PRR9 0.951 - - 0.951 - - - Mlig455_049973 {REF} {Length: 1124} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.8, Expect=5e-07]} {RNA1310_41607} {RNA815_54630}
26. MligTC455_12801 45 0.94 Mlig455_014787, Mlig455_014844

Neo: -

Age: -

 0.95 - - 0.950 - - -

Mlig455_014787 {REF} {Length: 900} {RNA1310_52577} {RNA815_26355}

Mlig455_014844 {REF} {Length: 1217} {RNA1310_52577} {RNA815_26355}
27. MligTC455_51559 43 0.89 Mlig455_002923, Mlig455_002941

Neo: -

Age: -

Region-enriched R2: 6.806/0.01463

 0.95 - - 0.950 - - -

Mlig455_002923 {REF} {Length: 1008} {RNA1310_77227} {RNA815_43894}

Mlig455_002941 {REF} {Length: 897} {RNA1310_88681} {RNA815_43894}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA