Data search
Results for MligTC455_17541
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17541 | 331 | 6.89 | Mlig455_048855 | Neo: - Age: - |
RPGRIP1L | Mlig455_048855 {REF} {Length: 3709} {Pfam: First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=159.0]; Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=63.3]; C2 domain [PF00168.32, score=40.3]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=357, Expect=5e-107]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=327, Expect=2e-96]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=337, Expect=8e-100]} {RNA1509_38031, RNA1509_38468, RNA1509_54703} {RNA1310_2541.1, RNA1509_38031, RNA1509_38468, RNA1509_54703} {RNA1509_38031, RNA1509_38468, RNA1509_54703, RNA815_452} |
Cumulative graph for MligTC455_17541
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.227 | 3.242 | 0.04011 | 0.48721 | |
| RegionR2 | 2.122 | 3.242 | 0.00884 | 0.09358 | |
| RegionR3 | 1.912 | 3.242 | 0.00481 | 0.09260 | |
| RegionR4 | 0.909 | 3.242 | 0.31039 | 0.62503 | |
| RegionR5 | 0.805 | 3.242 | 0.34669 | 0.69544 | |
| RegionR6 | 0.757 | 3.242 | 0.41336 | 0.98175 | |
| RegionR7 | 0.02 | 3.242 | 0.84908 | 1.00000 | |
| RegionR8 | 0.703 | 3.242 | 0.52807 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.128 | 3.242 | 0.99998 | 1.00000 | |
| RegenerationR2 | -0.124 | 3.242 | 0.77720 | 0.98250 | |
| RegenerationR3 | 0.089 | 3.242 | 0.85567 | 0.99991 | |
| RegenerationR4 | 0.158 | 3.242 | 0.77039 | 0.97676 | |
| RegenerationR5 | 0.122 | 3.242 | 0.80593 | 0.99004 | |
| RegenerationR6 | 0.331 | 3.242 | 0.57444 | 0.85426 | |
| RegenerationBL | 0.546 | 3.242 | 0.42731 | 0.79545 | |
| RegenerationTP | -0.892 | 3.242 | 0.34326 | 0.78629 |
Genes with expression patterns similar to MligTC455_17541
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17541 | 331 | 6.89 | Mlig455_048855 | Neo: - Age: - |
RPGRIP1L | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_048855 {REF} {Length: 3709} {Pfam: First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=159.0]; Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=63.3]; C2 domain [PF00168.32, score=40.3]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=357, Expect=5e-107]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=327, Expect=2e-96]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=337, Expect=8e-100]} {RNA1509_38031, RNA1509_38468, RNA1509_54703} {RNA1310_2541.1, RNA1509_38031, RNA1509_38468, RNA1509_54703} {RNA1509_38031, RNA1509_38468, RNA1509_54703, RNA815_452} |
| 2. | MligTC455_49764 | 109 | 2.28 | Mlig455_004382 | Neo: - Age: - |
TTC39A | 0.976 | - | - | - | - | 0.976 | - | Mlig455_004382 {REF} {Length: 2484} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3808) [PF10300.11, score=302.5]} {Human: ENSG00000085831, TTC39A, tetratricopeptide repeat domain 39A, [Score=274, Expect=2e-83]; ENSG00000155158, TTC39B, tetratricopeptide repeat domain 39B, [Score=261, Expect=1e-77]} {Mouse: ENSMUSG00000028555, Ttc39a, tetratricopeptide repeat domain 39A, [Score=283, Expect=7e-87]; ENSMUSG00000038172, Ttc39b, tetratricopeptide repeat domain 39B, [Score=271, Expect=6e-82]} {Celegans: WBGene00016314, C32D5.6, [Score=201, Expect=1e-56]} {Smed: dd_Smed_v6_6902_0_1, dd_Smed_v6_6902_0_1, [Score=305, Expect=3e-95]} {RNA1509_31140} {RNA1310_3012.1} {RNA815_12014} |
| 3. | MligTC455_33283 | 354 | 7.37 | Mlig455_051062 | Neo: Irradiation Age: - Region-enriched R2: 3.094/0.03650 |
0.958 | 0.958 | - | - | - | - | - | Mlig455_051062 {REF} {Length: 2962} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=21.6]} {Mouse: ENSMUSG00000031620, Iqcm, IQ motif containing M, [RH, Score=117, Expect=3e-28]} {RNA1509_32167} {RNA1310_961} {RNA815_7534} | |
| 4. | MligTC455_44463 | 494 | 10.29 | Mlig455_051981 | Neo: - Age: - |
NPHP1 | 0.954 | 0.954 | - | - | - | - | - | Mlig455_051981 {REF} {Length: 3299} {Pfam: SH3 domain [PF00018.30, score=39.9]; Variant SH3 domain [PF14604.8, score=34.6]; Variant SH3 domain [PF07653.19, score=26.3]} {Human: ENSG00000144061, NPHP1, nephrocystin 1, [RH, Score=219, Expect=1e-60]} {Mouse: ENSMUSG00000027378, Nphp1, nephronophthisis 1 (juvenile) homolog (human), [RH, Score=207, Expect=9e-57]} {Dmel: FBgn0263456, nwk, nervous wreck, [RH, Score=58.5, Expect=2e-08]} {Celegans: WBGene00010898, nphp-1, Nephrocystin-1-like protein, [Score=99.4, Expect=3e-21]} {Smed: dd_Smed_v6_9990_0_1, dd_Smed_v6_9990_0_1, [RH, Score=238, Expect=3e-66]} {RNA1509_32961, RNA1509_37905} {RNA1310_9260.1, RNA1509_37905} {RNA1509_37905, RNA815_7363} |
| 5. | MligTC455_18659 | 114 | 2.39 | Mlig455_021331 | Neo: - Age: - |
0.95 | 0.950 | - | - | - | - | - | Mlig455_021331 {REF} {Length: 1597} {Pfam: Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 [PF03318.15, score=31.6]} {Celegans: WBGene00016289, lntl-1, LIN-24 (Twenty-four) Like, [RH, Score=147, Expect=4e-42]} {RNA1509_6800} {RNA1310_20535, RNA1509_6800} {RNA1509_6800, RNA815_6611.1} |
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