M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_17593

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17593 881 18.35 Mlig455_003698, Mlig455_003905

Neo: -

Age: -

 PCIF1

Mlig455_003698 {REF} {Length: 4152} {TRANSSPLICED} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=224.4]; WW domain [PF00397.28, score=40.5]} {Human: ENSG00000100982, PCIF1, PDX1 C-terminal inhibiting factor 1, [RH, Score=567, Expect=0.0]} {Mouse: ENSMUSG00000039849, Pcif1, PDX1 C-terminal inhibiting factor 1, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0037021, CG11399, [RH, Score=536, Expect=2e-179]} {Smed: dd_Smed_v6_9161_0_1, dd_Smed_v6_9161_0_1, [RH, Score=459, Expect=7e-153]} {RNA1509_12189, RNA1509_49826} {RNA1310_4645, RNA1509_12189, RNA1509_49826} {RNA1509_12189, RNA1509_49826, RNA815_2873.1}

Mlig455_003905 {REF} {Length: 4144} {TRANSSPLICED} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=224.4]; WW domain [PF00397.28, score=40.5]} {Human: ENSG00000100982, PCIF1, PDX1 C-terminal inhibiting factor 1, [RH, Score=564, Expect=0.0]} {Mouse: ENSMUSG00000039849, Pcif1, PDX1 C-terminal inhibiting factor 1, [RH, Score=563, Expect=0.0]} {Dmel: FBgn0037021, CG11399, [RH, Score=540, Expect=0.0]} {Smed: dd_Smed_v6_9161_0_1, dd_Smed_v6_9161_0_1, [RH, Score=459, Expect=4e-153]} {RNA1509_12189} {RNA1310_4645} {RNA815_2873.1}

Cumulative graph for MligTC455_17593

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.281 4.369 0.02369 0.41355
RegionR2 1.416 4.369 0.05647 0.28527
RegionR3 0.388 4.369 0.64024 1.00000
RegionR4 1.058 4.369 0.17435 0.44003
RegionR5 1.233 4.369 0.04842 0.18334
RegionR6 1.236 4.369 0.06344 0.47218
RegionR7 1.619 4.369 0.01812 0.24698
RegionR8 0.33 4.369 0.71388 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 7.809 4.369 0.02153 0.58070
RegenerationR2 -0.074 4.369 0.84403 1.00000
RegenerationR3 0.155 4.369 0.72960 0.95749
RegenerationR4 -0.535 4.369 0.22471 0.67310
RegenerationR5 -0.124 4.369 0.75507 0.97335
RegenerationR6 -0.945 4.369 0.03505 0.23464
RegenerationBL 0.431 4.369 0.37178 0.73991
RegenerationTP 0.017 4.369 0.97449 1.00000


Genes with expression patterns similar to MligTC455_17593

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17593 881 18.35 Mlig455_003698, Mlig455_003905

Neo: -

Age: -

 PCIF1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_003698 {REF} {Length: 4152} {TRANSSPLICED} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=224.4]; WW domain [PF00397.28, score=40.5]} {Human: ENSG00000100982, PCIF1, PDX1 C-terminal inhibiting factor 1, [RH, Score=567, Expect=0.0]} {Mouse: ENSMUSG00000039849, Pcif1, PDX1 C-terminal inhibiting factor 1, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0037021, CG11399, [RH, Score=536, Expect=2e-179]} {Smed: dd_Smed_v6_9161_0_1, dd_Smed_v6_9161_0_1, [RH, Score=459, Expect=7e-153]} {RNA1509_12189, RNA1509_49826} {RNA1310_4645, RNA1509_12189, RNA1509_49826} {RNA1509_12189, RNA1509_49826, RNA815_2873.1}

Mlig455_003905 {REF} {Length: 4144} {TRANSSPLICED} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=224.4]; WW domain [PF00397.28, score=40.5]} {Human: ENSG00000100982, PCIF1, PDX1 C-terminal inhibiting factor 1, [RH, Score=564, Expect=0.0]} {Mouse: ENSMUSG00000039849, Pcif1, PDX1 C-terminal inhibiting factor 1, [RH, Score=563, Expect=0.0]} {Dmel: FBgn0037021, CG11399, [RH, Score=540, Expect=0.0]} {Smed: dd_Smed_v6_9161_0_1, dd_Smed_v6_9161_0_1, [RH, Score=459, Expect=4e-153]} {RNA1509_12189} {RNA1310_4645} {RNA815_2873.1}
2. MligTC455_50576 526 10.95 Mlig455_036753

Neo: -

Age: -

Region-enriched R5: 1.140/0.01947

 1.805 - - - - 0.849 0.956 Mlig455_036753 {REF} {Length: 2233} {TRANSSPLICED} {RNA1509_41506, RNA1509_55208, RNA1509_56692} {RNA1310_18042, RNA1509_41506, RNA1509_55208, RNA1509_56692} {RNA1509_41506, RNA1509_55208, RNA1509_56692, RNA815_17149}
3. MligTC455_48643 997 20.78 Mlig455_062585

Neo: -

Age: -

 TBC1D30 1.755 - 0.768 - - - 0.987 Mlig455_062585 {REF} {Length: 4312} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=120.0]} {Human: ENSG00000111490, TBC1D30, TBC1 domain family member 30, [RH, Score=404, Expect=8e-127]} {Mouse: ENSMUSG00000052302, Tbc1d30, TBC1 domain family, member 30, [RH, Score=406, Expect=1e-127]} {Dmel: FBgn0261928, CG42795, [RH, Score=309, Expect=2e-87]} {Celegans: WBGene00015410, tbc-6, Growth hormone-regulated TBC protein 6, [Score=107, Expect=4e-25]} {Smed: dd_Smed_v6_6508_0_1, dd_Smed_v6_6508_0_1, [RH, Score=475, Expect=2e-152]} {RNA1509_16721, RNA1509_17210, RNA1509_52239} {RNA1310_5240, RNA1509_16721, RNA1509_17210, RNA1509_52239} {RNA1509_16721, RNA1509_17210, RNA1509_52239, RNA815_1005.1}
4. MligTC455_47506 2016 42 Mlig455_022609, Mlig455_063634

Neo: -

Age: -

Region-enriched R4: 1.114/0.00086

 1.748 - 0.779 - - - 0.969

Mlig455_022609 {REF} {Length: 1920} {TRANSSPLICED} {Pfam: Mitochondrial and peroxisomal fission factor Mff [PF05644.13, score=85.8]} {RNA1509_24447} {RNA1310_29887} {RNA815_20947}

Mlig455_063634 {REF} {Length: 1609} {TRANSSPLICED} {Pfam: Mitochondrial and peroxisomal fission factor Mff [PF05644.13, score=67.6]} {RNA1509_24447} {RNA1310_53535, RNA1509_24447} {RNA1509_24447, RNA815_33306}
5. MligTC455_36501 288 5.99 Mlig455_029768

Neo: -

Age: -

 SLC35B3 1.701 - - 0.730 - - 0.971 Mlig455_029768 {REF} {Length: 2346} {TRANSSPLICED} {Pfam: UAA transporter family [PF08449.13, score=262.5]; Cytochrome c oxidase subunit VIc [PF02937.17, score=34.5]; EamA-like transporter family [PF00892.22, score=20.4]} {Human: ENSG00000124786, SLC35B3, solute carrier family 35 member B3, [RH, Score=355, Expect=5e-118]} {Mouse: ENSMUSG00000021432, Slc35b3, solute carrier family 35, member B3, [RH, Score=363, Expect=2e-121]} {Dmel: FBgn0036695, Papst2, PAPS transporter 2, [RH, Score=330, Expect=5e-109]} {Celegans: WBGene00018827, pst-2, Adenosine 3'-phospho 5'-phosphosulfate transporter 2, [RH, Score=306, Expect=7e-100]} {Smed: dd_Smed_v6_8200_0_1, dd_Smed_v6_8200_0_1, [RH, Score=349, Expect=6e-117]} {RNA1509_6797} {RNA1310_11349} {RNA815_6248.2}
6. MligTC455_15851 848 17.66 Mlig455_003673, Mlig455_003717

Neo: -

Age: -

 BRF1 1.695 - - 0.732 - - 0.963

Mlig455_003673 {REF} {Length: 2876} {TRANSSPLICED} {Pfam: Transcription factor TFIIB repeat [PF00382.21, score=158.9]; Brf1-like TBP-binding domain [PF07741.15, score=57.6]; TFIIB zinc-binding [PF08271.14, score=40.5]; Cyclin, N-terminal domain [PF00134.25, score=23.2]} {Human: ENSG00000185024, BRF1, BRF1, RNA polymerase III transcription initiation factor subunit, [RH, Score=357, Expect=3e-112]} {Mouse: ENSMUSG00000011158, Brf1, BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit, [RH, Score=358, Expect=1e-112]} {Dmel: FBgn0038499, Brf, [RH, Score=331, Expect=1e-102]} {Celegans: WBGene00000271, brf-1, BRF (Transcription factor) homolog, [RH, Score=326, Expect=4e-100]} {Smed: dd_Smed_v6_1437_0_1, dd_Smed_v6_1437_0_1, [RH, Score=230, Expect=2e-66]} {RNA1509_17011} {RNA1310_6240.1} {RNA815_10656}

Mlig455_003717 {REF} {Length: 2875} {TRANSSPLICED} {Pfam: Transcription factor TFIIB repeat [PF00382.21, score=158.9]; Brf1-like TBP-binding domain [PF07741.15, score=57.6]; TFIIB zinc-binding [PF08271.14, score=40.5]; Cyclin, N-terminal domain [PF00134.25, score=23.2]} {Human: ENSG00000185024, BRF1, BRF1, RNA polymerase III transcription initiation factor subunit, [RH, Score=357, Expect=3e-112]} {Mouse: ENSMUSG00000011158, Brf1, BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit, [RH, Score=358, Expect=1e-112]} {Dmel: FBgn0038499, Brf, [RH, Score=331, Expect=9e-103]} {Celegans: WBGene00000271, brf-1, BRF (Transcription factor) homolog, [RH, Score=326, Expect=6e-100]} {Smed: dd_Smed_v6_1437_0_1, dd_Smed_v6_1437_0_1, [RH, Score=229, Expect=3e-66]} {RNA1509_17011} {RNA1310_6240.1, RNA1509_17011} {RNA1509_17011, RNA815_10656}
7. MligTC455_51099 360 7.5 Mlig455_047506

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.445

 1.688 - - - 0.713 - 0.975 Mlig455_047506 {REF} {Length: 4175} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=28.5]} {Smed: dd_Smed_v6_9315_0_1, dd_Smed_v6_9315_0_1, [RH, Score=244, Expect=4e-72]} {RNA1509_24506} {RNA1310_18225} {RNA815_24239}
8. MligTC455_23669 891 18.56 Mlig455_022955

Neo: -

Age: -

 TNRC6C 1.684 0.727 - - - - 0.957 Mlig455_022955 {REF} {Length: 8332} {Pfam: UBA/TS-N domain [PF00627.33, score=32.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.4]} {Human: ENSG00000078687, TNRC6C, trinucleotide repeat containing 6C, [Score=53.1, Expect=3e-06]} {Mouse: ENSMUSG00000025571, Tnrc6c, trinucleotide repeat containing 6C, [Score=52.8, Expect=3e-06]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=59.7, Expect=9e-09]} {RNA1509_42994, RNA1509_53029} {RNA1310_4153.2, RNA1509_53029} {RNA1509_53029, RNA815_2902}
9. MligTC455_21350 184 3.83 Mlig455_064601

Neo: -

Age: Down-Down-Up

 PIR 0.974 - - - - - 0.974 Mlig455_064601 {REF} {Length: 1684} {TRANSSPLICED} {Pfam: Pirin [PF02678.18, score=114.3]; Pirin C-terminal cupin domain [PF05726.15, score=96.8]; Cupin domain [PF07883.13, score=28.2]} {Human: ENSG00000087842, PIR, pirin, [RH, Score=318, Expect=1e-108]} {Mouse: ENSMUSG00000031379, Pir, pirin, [RH, Score=310, Expect=1e-105]} {RNA1509_26991, RNA1509_39833} {RNA1310_25739, RNA1509_39833} {RNA1509_39833, RNA815_15910}
10. MligTC455_31846 149 3.11 Mlig455_068643

Neo: -

Age: -

 LRRC7 0.973 - - - - - 0.973 Mlig455_068643 {REF} {Length: 4432} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=123.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=68.5]; PDZ domain [PF00595.26, score=46.1]; PDZ domain [PF17820.3, score=22.3]} {Human: ENSG00000033122, LRRC7, leucine rich repeat containing 7, [RH, Score=356, Expect=2e-102]} {Mouse: ENSMUSG00000028176, Lrrc7, leucine rich repeat containing 7, [RH, Score=362, Expect=3e-105]} {Dmel: FBgn0033984, Lap1, [RH, Score=295, Expect=6e-85]} {Celegans: WBGene00002632, let-413, [Score=296, Expect=5e-87]} {Smed: dd_Smed_v6_4770_0_1, dd_Smed_v6_4770_0_1, [RH, Score=317, Expect=1e-91]} {RNA1509_38652} {RNA1310_6256} {RNA815_10502}
11. MligTC455_52192 226 4.71 Mlig455_068166

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_068166 {REF} {Length: 3142} {RNA1509_23776} {RNA1310_15288, RNA1509_23776} {RNA1509_23776, RNA815_7581}
12. MligTC455_16368 545 11.35 Mlig455_024319

Neo: -

Age: -

 ZNF628 0.97 - - - - - 0.970 Mlig455_024319 {REF} {Length: 4468} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=45.6]; Zinc finger, C2H2 type [PF00096.28, score=37.3]; C2H2-type zinc finger [PF13894.8, score=31.3]} {Human: ENSG00000197483, ZNF628, zinc finger protein 628, [Score=98.6, Expect=4e-21]; ENSG00000130856, ZNF236, zinc finger protein 236, [Score=98.6, Expect=5e-21]; ENSG00000152454, ZNF256, zinc finger protein 256, [Score=98.6, Expect=3e-21]; ENSG00000122386, ZNF205, zinc finger protein 205, [Score=95.5, Expect=3e-20]; ENSG00000178187, ZNF454, zinc finger protein 454, [Score=95.1, Expect=3e-20]; ENSG00000141040, ZNF287, zinc finger protein 287, [Score=94.7, Expect=6e-20]; ENSG00000102870, ZNF629, zinc finger protein 629, [Score=94.7, Expect=6e-20]} {Mouse: ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=97.8, Expect=6e-21]; ENSMUSG00000074406, Zfp628, zinc finger protein 628, [Score=95.9, Expect=2e-20]; ENSMUSG00000045639, Zfp629, zinc finger protein 629, [Score=95.9, Expect=2e-20]; ENSMUSG00000072915, Gm12258, predicted gene 12258, [Score=95.1, Expect=8e-23]; ENSMUSG00000093910, Zfp853, zinc finger protein 853, [Score=95.1, Expect=2e-20]; ENSMUSG00000058291, Zfp68, zinc finger protein 68, [Score=94.7, Expect=4e-20]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=94.7, Expect=2e-20]; ENSMUSG00000048728, Zfp454, zinc finger protein 454, [Score=93.2, Expect=1e-19]} {Dmel: FBgn0035625, Blimp-1, [Score=92.8, Expect=1e-19]} {Celegans: WBGene00000483, che-1, Transcription factor che-1, [Score=87.4, Expect=5e-19]} {Smed: dd_Smed_v6_85977_0_1, dd_Smed_v6_85977_0_1, [Score=97.4, Expect=9e-24]} {RNA1509_14204, RNA1509_40122} {RNA1310_11199, RNA1509_14204, RNA1509_40122} {RNA1509_14204, RNA1509_40122, RNA815_8539.1}
13. MligTC455_31847 661 13.78 Mlig455_025501, Mlig455_070503

Neo: -

Age: Down-Up-Down

 KCNMA1 0.97 - - - - - 0.970

Mlig455_025501 {REF} {Length: 4552} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=85.2]; Ion channel [PF07885.18, score=43.4]; Ion transport protein [PF00520.33, score=34.6]; TrkA-N domain [PF02254.20, score=22.5]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=488, Expect=4e-154]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=335, Expect=3e-97]} {Dmel: FBgn0003429, slo, slowpoke, [Score=484, Expect=1e-151]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=454, Expect=9e-141]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=476, Expect=1e-149]} {RNA1509_14763} {RNA1310_2844.1} {RNA815_830}

Mlig455_070503 {REF} {Length: 4866} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=85.2]; Ion channel [PF07885.18, score=43.4]; Ion transport protein [PF00520.33, score=34.6]; TrkA-N domain [PF02254.20, score=22.5]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=488, Expect=4e-154]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=335, Expect=3e-97]} {Dmel: FBgn0003429, slo, slowpoke, [Score=484, Expect=1e-151]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=454, Expect=9e-141]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=476, Expect=1e-149]} {RNA1509_14763} {RNA1310_2844.1, RNA1509_14763} {RNA1509_14763, RNA815_830}
14. MligTC455_39829 112 2.34 Mlig455_015928

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.786

 SVOP 0.97 - - - - - 0.970 Mlig455_015928 {REF} {Length: 4798} {Pfam: Sugar (and other) transporter [PF00083.26, score=137.1]; Major Facilitator Superfamily [PF07690.18, score=130.4]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=134, Expect=3e-32]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=120, Expect=8e-28]} {Dmel: FBgn0034956, CG4324, [Score=127, Expect=1e-30]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=138, Expect=3e-34]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=178, Expect=4e-48]} {RNA1509_47157} {RNA1310_47802} {RNA815_44733}
15. MligTC455_43110 746 15.54 Mlig455_029622

Neo: -

Age: -

Region-enriched R2: 1.632/0.03045

 ARRDC2 0.969 - - - - - 0.969 Mlig455_029622 {REF} {Length: 1778} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=52.7]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=39.2]} {Human: ENSG00000105643, ARRDC2, arrestin domain containing 2, [Score=76.6, Expect=5e-15]} {Mouse: ENSMUSG00000110906, Arrdc2, arrestin domain containing 2, [Score=84.7, Expect=7e-18]; ENSMUSG00000002910, Arrdc2, arrestin domain containing 2, [Score=84.7, Expect=7e-18]} {Dmel: FBgn0035103, Vdup1, Vitamin D[[3]] up-regulated protein 1, [Score=76.3, Expect=2e-15]} {Celegans: WBGene00011732, arrd-17, Arrestin domain-containing protein 17, [Score=60.5, Expect=4e-10]} {Smed: dd_Smed_v6_8715_0_1, dd_Smed_v6_8715_0_1, [Score=51.6, Expect=3e-07]} {RNA1509_45476} {RNA1310_16251} {RNA815_9075}
16. MligTC455_07316 373 7.77 Mlig455_000488

Neo: Irradiation

Age: Down-Up-Down

 SIN3A 0.968 - - - - - 0.968 Mlig455_000488 {REF} {Length: 4419} {TRANSSPLICED} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=95.9]; Paired amphipathic helix repeat [PF02671.23, score=90.8]; Sin3 family co-repressor [PF08295.14, score=90.8]} {Human: ENSG00000169375, SIN3A, SIN3 transcription regulator family member A, [Score=299, Expect=2e-83]} {Mouse: ENSMUSG00000042557, Sin3a, transcriptional regulator, SIN3A (yeast), [Score=338, Expect=5e-97]} {Dmel: FBgn0022764, Sin3A, [Score=250, Expect=3e-67]} {Celegans: WBGene00004117, sin-3, Paired amphipathic helix protein sin-3, [Score=110, Expect=5e-24]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=211, Expect=2e-55]} {RNA1509_41252, RNA1509_4899} {RNA1310_4266.2, RNA1509_41252, RNA1509_4899} {RNA1509_41252, RNA1509_4899, RNA815_1997}
17. MligTC455_12320 129 2.69 Mlig455_029741

Neo: -

Age: -

 ZBTB9 0.968 - - - - - 0.968 Mlig455_029741 {REF} {Length: 3224} {TRANSSPLICED} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=66.6]; BTB/POZ domain [PF00651.33, score=64.6]; Kelch motif [PF01344.27, score=31.6]} {Human: ENSG00000213588, ZBTB9, zinc finger and BTB domain containing 9, [RH, Score=74.3, Expect=3e-13]; ENSG00000236515, ZBTB9, zinc finger and BTB domain containing 9, [RH, Score=74.3, Expect=3e-13]} {Mouse: ENSMUSG00000026788, Zbtb43, zinc finger and BTB domain containing 43, [RH, Score=73.6, Expect=8e-15]} {Dmel: FBgn0264442, ab, abrupt, [RH, Score=63.9, Expect=4e-10]} {Celegans: WBGene00001324, eor-1, EOR-1, [Score=56.2, Expect=6e-08]} {Smed: dd_Smed_v6_5109_0_2, dd_Smed_v6_5109_0_2, [RH, Score=105, Expect=2e-23]} {RNA1509_24801} {RNA1310_5520} {RNA815_6434}
18. MligTC455_54028 1167 24.32 Mlig455_043255

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_043255 {REF} {Length: 2596} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=58.3]; Ring finger domain [PF13639.8, score=20.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=18.6]; RING-type zinc-finger [PF13445.8, score=18.6]} {Dmel: FBgn0265356, tn, thin, [Score=91.7, Expect=9e-19]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=72.0, Expect=7e-13]} {Smed: dd_Smed_v6_12812_0_1, dd_Smed_v6_12812_0_1, [Score=77.0, Expect=8e-15]} {RNA1509_16436, RNA1509_25253} {RNA1310_7659.1, RNA1509_16436, RNA1509_25253} {RNA1509_16436, RNA1509_25253, RNA815_2458.1}
19. MligTC455_09728 218 4.54 Mlig455_059814

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_059814 {REF} {Length: 769} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=25.4]; C2H2-type zinc finger [PF13894.8, score=20.1]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=18.2]}
20. MligTC455_21621 591 12.3 Mlig455_006562, Mlig455_006675, Mlig455_011917, Mlig455_011927

Neo: -

Age: -

 ECE2, KXD1 0.966 - - - - - 0.966

Mlig455_006562 {REF} {Length: 1503} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein [PF10241.11, score=74.9]} {Human: ENSG00000105700, KXD1, KxDL motif containing 1, [RH, Score=80.5, Expect=6e-19]} {Mouse: ENSMUSG00000055553, Kxd1, KxDL motif containing 1, [RH, Score=79.7, Expect=8e-19]} {Dmel: FBgn0036291, CG10681, [RH, Score=73.6, Expect=3e-16]} {Celegans: WBGene00015742, kxd-1, KXDl (KxDL) motif containing homolog, [RH, Score=63.9, Expect=2e-13]} {Smed: dd_Smed_v6_4564_0_1, dd_Smed_v6_4564_0_1, [RH, Score=72.0, Expect=8e-17]} {RNA1509_33785} {RNA1310_17136} {RNA815_26835}

Mlig455_006675 {REF} {Length: 1681} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein [PF10241.11, score=74.8]} {Human: ENSG00000105700, KXD1, KxDL motif containing 1, [RH, Score=79.7, Expect=4e-19]} {Mouse: ENSMUSG00000055553, Kxd1, KxDL motif containing 1, [RH, Score=80.1, Expect=1e-18]} {Dmel: FBgn0036291, CG10681, [RH, Score=73.9, Expect=2e-16]} {Celegans: WBGene00015742, kxd-1, KXDl (KxDL) motif containing homolog, [Score=59.7, Expect=8e-12]} {Smed: dd_Smed_v6_4564_0_1, dd_Smed_v6_4564_0_1, [RH, Score=71.2, Expect=2e-16]} {RNA1509_33785} {RNA1310_43819, RNA1509_33785} {RNA1509_33785, RNA815_26835}

Mlig455_011917 {REF} {Length: 2927} {Pfam: Peptidase family M13 [PF01431.23, score=111.1]; Peptidase family M13 [PF05649.15, score=24.2]} {Human: ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=84.7, Expect=1e-16]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=84.7, Expect=1e-16]; ENSG00000197993, KEL, Kell metallo-endopeptidase (Kell blood group), [Score=80.9, Expect=2e-15]; ENSG00000276615, KEL, Kell metallo-endopeptidase (Kell blood group), [Score=80.9, Expect=2e-15]} {Mouse: ENSMUSG00000029866, Kel, Kell blood group, [Score=89.0, Expect=4e-18]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=87.8, Expect=1e-17]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=87.4, Expect=1e-17]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=90.1, Expect=1e-18]} {Celegans: WBGene00013926, nep-1, Neprilysin-1, [Score=78.6, Expect=5e-15]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=77.8, Expect=5e-15]} {RNA1509_49326} {RNA1310_10797} {RNA815_14357}

Mlig455_011927 {REF} {Length: 1578} {Pfam: Peptidase family M13 [PF01431.23, score=113.5]; Peptidase family M13 [PF05649.15, score=25.9]} {Human: ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=85.1, Expect=5e-17]; ENSG00000197993, KEL, Kell metallo-endopeptidase (Kell blood group), [Score=84.7, Expect=7e-17]; ENSG00000276615, KEL, Kell metallo-endopeptidase (Kell blood group), [Score=84.7, Expect=7e-17]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=84.7, Expect=7e-17]} {Mouse: ENSMUSG00000027820, Mme, membrane metallo endopeptidase, [Score=93.6, Expect=6e-20]; ENSMUSG00000029866, Kel, Kell blood group, [Score=91.3, Expect=3e-19]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=97.4, Expect=3e-21]} {Celegans: WBGene00013926, nep-1, Neprilysin-1, [Score=89.4, Expect=7e-19]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=86.3, Expect=7e-18]} {RNA1509_49326} {RNA1310_10797} {RNA815_14357}
21. MligTC455_30486 1563 32.57 Mlig455_003470, Mlig455_058148

Neo: -

Age: -

 RAD54L2 0.966 - - - - - 0.966

Mlig455_003470 {REF} {Length: 7464} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=175.2]; Helicase conserved C-terminal domain [PF00271.33, score=51.3]} {Human: ENSG00000164080, RAD54L2, RAD54 like 2, [RH, Score=814, Expect=0.0]} {Mouse: ENSMUSG00000040661, Rad54l2, RAD54 like 2 (S. cerevisiae), [RH, Score=810, Expect=0.0]} {Dmel: FBgn0034976, CG4049, [RH, Score=501, Expect=1e-147]} {Celegans: WBGene00007761, rad-26, [Score=405, Expect=2e-117]} {Smed: dd_Smed_v6_6847_0_1, dd_Smed_v6_6847_0_1, [RH, Score=785, Expect=0.0]} {RNA1509_19630, RNA1509_4865} {RNA1310_603.1, RNA1509_19630} {RNA1509_19630, RNA815_365.1}

Mlig455_058148 {REF} {Length: 7503} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=175.3]; Helicase conserved C-terminal domain [PF00271.33, score=51.3]; Type III restriction enzyme, res subunit [PF04851.17, score=30.5]} {Human: ENSG00000164080, RAD54L2, RAD54 like 2, [RH, Score=816, Expect=0.0]} {Mouse: ENSMUSG00000040661, Rad54l2, RAD54 like 2 (S. cerevisiae), [RH, Score=810, Expect=0.0]} {Dmel: FBgn0034976, CG4049, [RH, Score=501, Expect=1e-147]} {Celegans: WBGene00007761, rad-26, [RH, Score=410, Expect=3e-119]} {Smed: dd_Smed_v6_6847_0_1, dd_Smed_v6_6847_0_1, [RH, Score=785, Expect=0.0]} {RNA1509_4865} {RNA1310_603.1} {RNA815_365.1}
22. MligTC455_46259 104 2.16 Mlig455_030390

Neo: -

Age: Down-Up-Down

Regeneration-enriched TP: 8.563
Regeneration-enriched R5: 5.471
Regeneration-enriched R3: 5.408
Regeneration-enriched R4: 5.108

 0.966 - - - - - 0.966 Mlig455_030390 {REF} {Length: 2412} {Pfam: Jumping translocation breakpoint protein (JTB) [PF05439.14, score=30.9]} {Smed: dd_Smed_v6_8352_0_1, dd_Smed_v6_8352_0_1, [Score=52.0, Expect=9e-09]} {RNA1509_33082} {RNA1310_34573.1, RNA1509_33082} {RNA1509_33082, RNA815_15763.1}
23. MligTC455_53814 76 1.59 Mlig455_013605

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_013605 {REF} {Length: 467} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_77656}
24. MligTC455_43768 354 7.38 Mlig455_027547

Neo: -

Age: -

 STK11 0.965 - - - - - 0.965 Mlig455_027547 {REF} {Length: 2652} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=156.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=91.1]; Kinase-like [PF14531.8, score=26.1]; ABC1 atypical kinase-like domain [PF03109.18, score=19.0]} {Human: ENSG00000118046, STK11, serine/threonine kinase 11, [RH, Score=216, Expect=8e-66]} {Mouse: ENSMUSG00000003068, Stk11, serine/threonine kinase 11, [Score=209, Expect=3e-63]} {Dmel: FBgn0038167, Lkb1, Lkb1 kinase, [Score=213, Expect=2e-63]} {Celegans: WBGene00003919, par-4, Serine/threonine-protein kinase par-4, [RH, Score=165, Expect=2e-45]} {Smed: dd_Smed_v6_10704_0_2, dd_Smed_v6_10704_0_2, [Score=263, Expect=1e-82]} {RNA1509_35109} {RNA1310_7591.1, RNA1509_35109} {RNA1509_35109, RNA815_6830}
25. MligTC455_46369 316 6.58 Mlig455_062173

Neo: -

Age: Up-Down-Down

 ZNF12 0.965 - - - - - 0.965 Mlig455_062173 {REF} {Length: 4399} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=103.3]; Zinc-finger double domain [PF13465.8, score=101.6]; C2H2-type zinc finger [PF13894.8, score=67.9]; Zinc-finger of C2H2 type [PF12874.9, score=32.5]; C2H2-type zinc finger [PF13912.8, score=31.1]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=28.2]; LYAR-type C2HC zinc finger [PF08790.13, score=22.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=22.3]} {Human: ENSG00000164631, ZNF12, zinc finger protein 12, [Score=154, Expect=3e-40]; ENSG00000198453, ZNF568, zinc finger protein 568, [Score=154, Expect=2e-40]; ENSG00000167384, ZNF180, zinc finger protein 180, [Score=152, Expect=1e-39]; ENSG00000198939, ZFP2, ZFP2 zinc finger protein, [Score=150, Expect=4e-40]; ENSG00000189180, ZNF33A, zinc finger protein 33A, [Score=149, Expect=3e-38]; ENSG00000096654, ZNF184, zinc finger protein 184, [Score=148, Expect=5e-38]; ENSG00000197951, ZNF71, zinc finger protein 71, [Score=147, Expect=3e-38]; ENSG00000146587, RBAK, RB associated KRAB zinc finger, [Score=147, Expect=1e-37]; ENSG00000196693, ZNF33B, zinc finger protein 33B, [Score=147, Expect=1e-37]} {Mouse: ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=156, Expect=3e-42]; ENSMUSG00000006720, Zfp184, zinc finger protein 184 (Kruppel-like), [Score=152, Expect=1e-39]} {Dmel: FBgn0051224, CG31224, [Score=119, Expect=2e-28]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=100, Expect=1e-22]} {Smed: dd_Smed_v6_6659_0_1, dd_Smed_v6_6659_0_1, [RH, Score=86.7, Expect=3e-18]} {RNA1509_16940} {RNA1310_20338} {RNA815_9397}
26. MligTC455_17896 109 2.28 Mlig455_025370

Neo: -

Age: logFC(26M/2M)=-1.625

 0.964 - - - - - 0.964 Mlig455_025370 {REF} {Length: 4898} {RNA1509_32517} {RNA1310_3990.1} {RNA815_18494}
27. MligTC455_26909 200 4.16 Mlig455_035392

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_035392 {REF} {Length: 996} {RNA1509_54658} {RNA1310_42131.1} {RNA815_34357}
28. MligTC455_00679 246 5.12 Mlig455_028787

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_028787 {REF} {Length: 537} {RNA1509_35184} {RNA1310_31249} {RNA815_18932.1}
29. MligTC455_19465 216 4.5 Mlig455_011567

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.898

Region-enriched R2: 2.709/0.02014

 LRRC69 0.963 - - - - - 0.963 Mlig455_011567 {REF} {Length: 2449} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=92.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=80.1]; Leucine Rich repeat [PF13516.8, score=33.3]; Leucine Rich Repeat [PF00560.35, score=27.4]} {Human: ENSG00000214954, LRRC69, leucine rich repeat containing 69, [RH, Score=198, Expect=7e-60]} {Mouse: ENSMUSG00000023151, Lrrc69, leucine rich repeat containing 69, [RH, Score=218, Expect=1e-67]} {Dmel: FBgn0033984, Lap1, [Score=105, Expect=3e-24]} {Celegans: WBGene00002632, let-413, [Score=112, Expect=8e-27]} {Smed: dd_Smed_v6_14722_0_1, dd_Smed_v6_14722_0_1, [RH, Score=184, Expect=5e-56]} {RNA1509_41102} {RNA1310_3215.1} {RNA815_13052}
30. MligTC455_32516 479 9.99 Mlig455_064074

Neo: Irradiation

Age: logFC(26M/2M)=-0.234

 OTUD7B 0.962 - - - - - 0.962 Mlig455_064074 {REF} {Length: 3551} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=67.6]} {Human: ENSG00000264522, OTUD7B, OTU deubiquitinase 7B, [RH, Score=250, Expect=6e-74]} {Mouse: ENSMUSG00000038495, Otud7b, OTU domain containing 7B, [RH, Score=250, Expect=5e-74]; ENSMUSG00000033510, Otud7a, OTU domain containing 7A, [RH, Score=243, Expect=1e-72]} {Dmel: FBgn0037734, trbd, trabid, [Score=124, Expect=6e-30]} {Celegans: WBGene00021733, otub-2, OTUBain deubiquitylating protease homolog, [RH, Score=238, Expect=4e-71]} {Smed: dd_Smed_v6_10637_0_1, dd_Smed_v6_10637_0_1, [Score=245, Expect=4e-75]} {RNA1509_13944} {RNA1310_14040.1, RNA1509_13944} {RNA1509_13944, RNA815_8064}
31. MligTC455_03722 610 12.71 Mlig455_021378

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.431

 POU6F2 0.96 - - - - - 0.960 Mlig455_021378 {REF} {Length: 3493} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=101.1]; Uncharacterized conserved domain (SAYSvFN) [PF10260.11, score=75.9]; Homeodomain [PF00046.31, score=59.3]} {Human: ENSG00000106536, POU6F2, POU class 6 homeobox 2, [RH, Score=247, Expect=1e-71]} {Mouse: ENSMUSG00000009734, Pou6f2, POU domain, class 6, transcription factor 2, [RH, Score=247, Expect=3e-72]} {Dmel: FBgn0261588, pdm3, pou domain motif 3, [RH, Score=243, Expect=2e-67]} {Celegans: WBGene00000441, ceh-18, Homeobox protein ceh-18, [Score=123, Expect=2e-29]} {Smed: dd_Smed_v6_13010_0_1, dd_Smed_v6_13010_0_1, [RH, Score=231, Expect=2e-67]} {RNA1509_23034} {RNA1310_7430} {RNA815_11647}
32. MligTC455_42112 216 4.5 Mlig455_012680

Neo: -

Age: Down-Down-Up

 0.96 - - - - - 0.960 Mlig455_012680 {REF} {Length: 1838} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=87.6]} {Dmel: FBgn0032506, CG9395, [Score=83.2, Expect=2e-16]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=205, Expect=6e-61]} {RNA1310_16265} {RNA815_5740.1}
33. MligTC455_27560 794 16.55 Mlig455_058229

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_058229 {REF} {Length: 190} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_5625} {RNA1310_26303.1} {RNA815_881.1}
34. MligTC455_48867 274 5.71 Mlig455_052014

Neo: -

Age: -

 CAPS2 0.959 - - - - - 0.959 Mlig455_052014 {REF} {Length: 3413} {TRANSSPLICED} {Human: ENSG00000180881, CAPS2, calcyphosine 2, [RH, Score=207, Expect=4e-60]} {Mouse: ENSMUSG00000035694, Caps2, calcyphosphine 2, [RH, Score=225, Expect=6e-65]} {Dmel: FBgn0051345, CG31345, [Score=63.5, Expect=5e-11]} {Smed: dd_Smed_v6_7209_0_1, dd_Smed_v6_7209_0_1, [Score=70.9, Expect=7e-14]} {RNA1509_44692} {RNA1310_9646.2, RNA1509_44692} {RNA1509_44692, RNA815_2138.1}
35. MligTC455_08309 157 3.27 Mlig455_026925

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_026925 {REF} {Length: 3129} {TRANSSPLICED} {RNA1509_28914} {RNA1310_5574.1} {RNA815_9311}
36. MligTC455_37895 245 5.1 Mlig455_050995

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.482

 CBL 0.958 - - - - - 0.958 Mlig455_050995 {REF} {Length: 3237} {Pfam: CBL proto-oncogene N-terminus, EF hand-like domain [PF02761.16, score=73.2]; CBL proto-oncogene N-terminus, SH2-like domain [PF02762.16, score=38.5]; CBL proto-oncogene N-terminal domain 1 [PF02262.18, score=38.3]} {Human: ENSG00000110395, CBL, Cbl proto-oncogene, [Score=149, Expect=5e-37]; ENSG00000114423, CBLB, Cbl proto-oncogene B, [Score=144, Expect=3e-35]} {Mouse: ENSMUSG00000034342, Cbl, Casitas B-lineage lymphoma, [Score=149, Expect=3e-37]; ENSMUSG00000022637, Cblb, Casitas B-lineage lymphoma b, [Score=144, Expect=2e-35]} {Dmel: FBgn0020224, Cbl, Cbl proto-oncogene, [Score=141, Expect=5e-36]} {Celegans: WBGene00004829, sli-1, Sli-1 protein; Suppressor of LIneage defect, [Score=129, Expect=1e-31]} {Smed: dd_Smed_v6_330_0_1, dd_Smed_v6_330_0_1, [Score=141, Expect=2e-35]} {RNA1509_30011} {RNA1310_9554.1, RNA1509_30011} {RNA1509_30011, RNA815_22511}
37. MligTC455_52462 166 3.45 Mlig455_005943

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=4.076

Regeneration-upregulated R2: 5.759

Regeneration-enriched R2: 5.759

 AGRN 0.958 - - - - - 0.958 Mlig455_005943 {REF} {Length: 1577} {Pfam: Kazal-type serine protease inhibitor domain [PF00050.23, score=130.4]; Kazal-type serine protease inhibitor domain [PF07648.17, score=91.6]} {Human: ENSG00000188157, AGRN, agrin, [Score=55.8, Expect=8e-08]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=56.2, Expect=4e-08]} {Dmel: FBgn0052354, CG32354, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [Score=51.6, Expect=5e-07]} {RNA1509_43736} {RNA1310_19594} {RNA815_11515}
38. MligTC455_17079 456 9.51 Mlig455_047957

Neo: -

Age: logFC(26M/2M)=-0.386

 0.957 - - - - - 0.957 Mlig455_047957 {REF} {Length: 4371} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=32.8]} {RNA1509_2662, RNA1509_52042} {RNA1310_2647.1, RNA1509_52042} {RNA1509_52042, RNA815_640}
39. MligTC455_21640 262 5.46 Mlig455_052657

Neo: -

Age: -

 SLC6A5 0.957 - - - - - 0.957 Mlig455_052657 {REF} {Length: 4833} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=583.6]; BTB/POZ domain [PF00651.33, score=59.5]; BTB And C-terminal Kelch [PF07707.17, score=44.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=24.7]; Protein of unknown function (DUF2722) [PF10846.10, score=18.1]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=316, Expect=2e-92]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=315, Expect=5e-92]} {Dmel: FBgn0034911, CG5549, [Score=313, Expect=5e-89]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=228, Expect=2e-63]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=273, Expect=1e-78]} {RNA1509_27437} {RNA1310_7302.1} {RNA815_3821}
40. MligTC455_24321 285 5.94 Mlig455_018579

Neo: Int S/G2/M

Age: -

 ANKMY2 0.957 - - - - - 0.957 Mlig455_018579 {REF} {Length: 2256} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.6]; Ankyrin repeats (many copies) [PF13637.8, score=37.2]; MYND finger [PF01753.20, score=32.0]; Ankyrin repeat [PF13606.8, score=31.2]; Ankyrin repeat [PF00023.32, score=29.3]; Ankyrin repeats (many copies) [PF13857.8, score=26.8]} {Human: ENSG00000106524, ANKMY2, ankyrin repeat and MYND domain containing 2, [RH, Score=254, Expect=2e-78]} {Mouse: ENSMUSG00000036188, Ankmy2, ankyrin repeat and MYND domain containing 2, [RH, Score=251, Expect=4e-77]} {Dmel: FBgn0036096, CG8003, [RH, Score=191, Expect=4e-55]} {Celegans: WBGene00000917, daf-25, Dauer abnormal formation protein 25, [RH, Score=137, Expect=2e-35]} {Smed: dd_Smed_v6_5921_0_2, dd_Smed_v6_5921_0_2, [RH, Score=232, Expect=8e-71]} {RNA1509_31086} {RNA1310_13185} {RNA815_18603}
41. MligTC455_47637 1168 24.33 Mlig455_041729, Mlig455_042071, Mlig455_042284, Mlig455_042294

Neo: -

Age: -

 0.957 - - - - - 0.957

Mlig455_041729 {REF} {Length: 2197} {RNA1509_28165} {RNA1310_12730.1} {RNA815_5541.1}

Mlig455_042071 {REF} {Length: 2956} {RNA1509_28165} {RNA1310_12730.1} {RNA815_5541.1}

Mlig455_042284 {REF} {Length: 2962} {RNA1509_28165} {RNA1310_12730.1} {RNA815_5541.1}

Mlig455_042294 {REF} {Length: 2760} {RNA1509_28165} {RNA1310_12730.1, RNA1509_28165} {RNA1509_28165, RNA815_5541.1}
42. MligTC455_50157 447 9.32 Mlig455_064319, Mlig455_064350

Neo: -

Age: Up-Down-Up

 AC027796.3 0.957 - - - - - 0.957

Mlig455_064319 {REF} {Length: 3674} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=58.3]} {Human: ENSG00000262304, AC027796.3, novel readthrough SHPK-TRPV1 protein, [RH, Score=202, Expect=3e-58]; ENSG00000197417, SHPK, sedoheptulokinase, [RH, Score=202, Expect=3e-58]} {Mouse: ENSMUSG00000005951, Shpk, sedoheptulokinase, [RH, Score=205, Expect=2e-59]} {Celegans: WBGene00012017, T25C8.1, [RH, Score=101, Expect=8e-23]} {Smed: dd_Smed_v6_8911_0_1, dd_Smed_v6_8911_0_1, [RH, Score=175, Expect=1e-48]} {RNA1509_33392, RNA1509_50851} {RNA1310_17495.1, RNA1509_50851} {RNA1509_50851, RNA815_26417}

Mlig455_064350 {REF} {Length: 2854} {TRANSSPLICED} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=58.3]} {Human: ENSG00000262304, AC027796.3, novel readthrough SHPK-TRPV1 protein, [RH, Score=202, Expect=3e-58]; ENSG00000197417, SHPK, sedoheptulokinase, [RH, Score=202, Expect=3e-58]} {Mouse: ENSMUSG00000005951, Shpk, sedoheptulokinase, [RH, Score=205, Expect=2e-59]} {Celegans: WBGene00012017, T25C8.1, [RH, Score=101, Expect=8e-23]} {Smed: dd_Smed_v6_8911_0_1, dd_Smed_v6_8911_0_1, [RH, Score=175, Expect=1e-48]} {RNA1509_33392} {RNA1310_17495.1, RNA1509_33392} {RNA1509_33392, RNA815_26417}
43. MligTC455_27130 286 5.96 Mlig455_034303

Neo: -

Age: Down-Up-Down

 0.956 - - - - - 0.956 Mlig455_034303 {REF} {Length: 3045} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=22.4]; Zn-finger in Ran binding protein and others [PF00641.20, score=18.0]} {RNA1509_8153} {RNA1310_4894.1} {RNA815_2603.1}
44. MligTC455_27578 602 12.55 Mlig455_005147, Mlig455_021609

Neo: -

Age: -

Region-enriched R2: 2.447/0.02893
Region-enriched R3: 2.184/0.02536

 GRM7 0.956 - - - - - 0.956

Mlig455_005147 {REF} {Length: 4442} {Pfam: Receptor family ligand binding region [PF01094.30, score=87.1]; Periplasmic binding protein [PF13458.8, score=52.8]} {Human: ENSG00000196277, GRM7, glutamate metabotropic receptor 7, [Score=86.7, Expect=2e-16]; ENSG00000124493, GRM4, glutamate metabotropic receptor 4, [Score=86.3, Expect=2e-16]} {Mouse: ENSMUSG00000063239, Grm4, glutamate receptor, metabotropic 4, [Score=89.0, Expect=2e-17]; ENSMUSG00000056755, Grm7, glutamate receptor, metabotropic 7, [Score=85.1, Expect=3e-16]} {Dmel: FBgn0050361, mtt, mangetout, [Score=63.9, Expect=9e-10]} {RNA1509_29063} {RNA1310_1120} {RNA815_323.1}

Mlig455_021609 {REF} {Length: 4442} {Pfam: Receptor family ligand binding region [PF01094.30, score=87.1]; Periplasmic binding protein [PF13458.8, score=52.8]} {Human: ENSG00000196277, GRM7, glutamate metabotropic receptor 7, [Score=86.7, Expect=2e-16]; ENSG00000124493, GRM4, glutamate metabotropic receptor 4, [Score=86.3, Expect=2e-16]} {Mouse: ENSMUSG00000063239, Grm4, glutamate receptor, metabotropic 4, [Score=89.0, Expect=2e-17]; ENSMUSG00000056755, Grm7, glutamate receptor, metabotropic 7, [Score=85.1, Expect=3e-16]} {Dmel: FBgn0050361, mtt, mangetout, [Score=63.9, Expect=9e-10]} {RNA1509_29063} {RNA1310_1120, RNA1509_29063} {RNA1509_29063, RNA815_323.1}
45. MligTC455_43002 147 3.07 Mlig455_004304

Neo: -

Age: Up-Down-Down

 GLUD1 0.956 - - - - - 0.956 Mlig455_004304 {REF} {Length: 2088} {Pfam: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase [PF00208.23, score=134.8]} {Human: ENSG00000148672, GLUD1, glutamate dehydrogenase 1, [Score=288, Expect=8e-94]; ENSG00000182890, GLUD2, glutamate dehydrogenase 2, [Score=285, Expect=5e-93]} {Mouse: ENSMUSG00000021794, Glud1, glutamate dehydrogenase 1, [Score=288, Expect=5e-94]} {Dmel: FBgn0001098, Gdh, Glutamate dehydrogenase, [Score=288, Expect=2e-96]} {Celegans: WBGene00014095, gdh-1, Glutamate dehydrogenase, [Score=240, Expect=4e-76]} {Smed: dd_Smed_v6_932_0_1, dd_Smed_v6_932_0_1, [Score=277, Expect=1e-90]} {RNA1509_18938, RNA1509_30743} {RNA1310_2661.2, RNA1509_18938} {RNA1509_18938, RNA815_713.2}
46. MligTC455_29003 223 4.64 Mlig455_066978

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_066978 {REF} {Length: 5329} {RNA1509_29353} {RNA1310_4523} {RNA815_17419}
47. MligTC455_51083 1601 33.34 Mlig455_008002

Neo: -

Age: -

 SMIM7 0.954 - - - - - 0.954 Mlig455_008002 {REF} {Length: 592} {TRANSSPLICED} {Pfam: Yos1-like [PF08571.12, score=20.1]} {Human: ENSG00000214046, SMIM7, small integral membrane protein 7, [RH, Score=77.4, Expect=3e-20]; ENSG00000268790, AC008764.4, novel protein, [RH, Score=73.6, Expect=8e-19]} {Mouse: ENSMUSG00000044600, Smim7, small integral membrane protein 7, [RH, Score=79.3, Expect=4e-21]} {Celegans: WBGene00021784, cogc-4, Conserved oligomeric Golgi complex subunit 4, [RH, Score=79.7, Expect=1e-21]} {RNA1509_17989} {RNA1310_43671.1} {RNA815_20598.1}
48. MligTC455_07386 489 10.19 Mlig455_027368

Neo: -

Age: logFC(26M/2M)=-0.333

 DCUN1D1 0.953 - - - - - 0.953 Mlig455_027368 {REF} {Length: 1599} {Pfam: Cullin binding [PF03556.17, score=115.3]; UBA-like domain [PF14555.8, score=35.3]} {Human: ENSG00000043093, DCUN1D1, defective in cullin neddylation 1 domain containing 1, [RH, Score=202, Expect=3e-64]; ENSG00000150401, DCUN1D2, defective in cullin neddylation 1 domain containing 2, [RH, Score=201, Expect=6e-64]} {Mouse: ENSMUSG00000038506, Dcun1d2, DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae), [RH, Score=206, Expect=7e-66]; ENSMUSG00000027708, Dcun1d1, DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae), [RH, Score=200, Expect=9e-64]; ENSMUSG00000113255, Tes3-ps, testis derived transcript 3, pseudogene, [RH, Score=199, Expect=2e-63]} {Dmel: FBgn0036510, SCCRO, Squamous cell carcinoma-related oncogene, [RH, Score=209, Expect=6e-67]} {Celegans: WBGene00010428, dcn-1, Defective in cullin neddylation protein 1, [RH, Score=154, Expect=2e-45]} {Smed: dd_Smed_v6_3227_0_1, dd_Smed_v6_3227_0_1, [RH, Score=162, Expect=4e-49]} {RNA1509_29976} {RNA1310_19606.1} {RNA815_7902}
49. MligTC455_09773 633 13.18 Mlig455_031595

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_031595 {REF} {Length: 1992} {RNA1509_30983} {RNA1310_27418, RNA1509_30983} {RNA1509_30983, RNA815_40613}
50. MligTC455_32691 346 7.2 Mlig455_064692

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_064692 {REF} {Length: 1120} {Pfam: Domain of unknown function (DUF4472) [PF14739.8, score=20.1]} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=70.9, Expect=1e-15]} {RNA1310_132693} {RNA815_26782}
51. MligTC455_32802 82 1.71 Mlig455_058732

Neo: Int S/G2/M

Age: -

 CLEC16A 0.953 - - - - - 0.953 Mlig455_058732 {REF} {Length: 5696} {TRANSSPLICED} {Pfam: CLEC16A C-terminal [PF19439.1, score=338.2]; Uncharacterised conserved protein [PF09758.11, score=191.5]} {Human: ENSG00000038532, CLEC16A, C-type lectin domain containing 16A, [RH, Score=746, Expect=0.0]} {Mouse: ENSMUSG00000068663, Clec16a, C-type lectin domain family 16, member A, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0038427, ema, endosomal maturation defective, [RH, Score=692, Expect=0.0]} {Celegans: WBGene00001660, gop-1, Protein CLEC16A homolog, [RH, Score=310, Expect=4e-89]} {Smed: dd_Smed_v6_3621_0_1, dd_Smed_v6_3621_0_1, [RH, Score=652, Expect=0.0]} {RNA1509_19027} {RNA1310_5561.1} {RNA815_6181}
52. MligTC455_35495 586 12.21 Mlig455_023069

Neo: -

Age: -

 PCF11 0.953 - - - - - 0.953 Mlig455_023069 {REF} {Length: 4117} {TRANSSPLICED} {Pfam: CID domain [PF04818.15, score=32.6]} {Human: ENSG00000165494, PCF11, PCF11, cleavage and polyadenylation factor subunit, [RH, Score=91.3, Expect=6e-18]} {Mouse: ENSMUSG00000041328, Pcf11, PCF11 cleavage and polyadenylation factor subunit, [RH, Score=92.4, Expect=2e-18]} {Dmel: FBgn0264962, Pcf11, Protein 1 of cleavage and polyadenylation factor 1, [Score=78.6, Expect=3e-14]} {Smed: dd_Smed_v6_3280_0_1, dd_Smed_v6_3280_0_1, [RH, Score=191, Expect=3e-50]} {RNA1509_13594} {RNA1310_1865.1} {RNA815_5333}
53. MligTC455_40801 425 8.85 Mlig455_003100, Mlig455_062789

Neo: -

Age: logFC(26M/2M)=-0.250

Region-enriched R2: 3.506/0.00053
Region-enriched R3: 2.405/0.00633

 MDH1B 0.953 - - - - - 0.953

Mlig455_003100 {REF} {Length: 4802} {Pfam: lactate/malate dehydrogenase, alpha/beta C-terminal domain [PF02866.20, score=53.0]} {Human: ENSG00000138400, MDH1B, malate dehydrogenase 1B, [Score=323, Expect=1e-102]} {Mouse: ENSMUSG00000025963, Mdh1b, malate dehydrogenase 1B, NAD (soluble), [Score=304, Expect=1e-95]} {Dmel: FBgn0262782, Mdh1, Malate dehydrogenase 1, [Score=107, Expect=3e-25]} {Celegans: WBGene00018491, mdh-1, Malate DeHydrogenase, [Score=98.2, Expect=4e-22]} {Smed: dd_Smed_v6_10200_0_1, dd_Smed_v6_10200_0_1, [Score=335, Expect=2e-106]} {RNA1509_47623, RNA1509_9622} {RNA1310_5189, RNA1509_47623} {RNA1509_47623, RNA815_3770}

Mlig455_062789 {REF} {Length: 2979} {Pfam: lactate/malate dehydrogenase, alpha/beta C-terminal domain [PF02866.20, score=52.9]} {Human: ENSG00000138400, MDH1B, malate dehydrogenase 1B, [Score=323, Expect=1e-102]} {Mouse: ENSMUSG00000025963, Mdh1b, malate dehydrogenase 1B, NAD (soluble), [Score=304, Expect=1e-95]} {Dmel: FBgn0262782, Mdh1, Malate dehydrogenase 1, [Score=105, Expect=2e-24]} {Celegans: WBGene00018491, mdh-1, Malate DeHydrogenase, [Score=97.8, Expect=5e-22]} {Smed: dd_Smed_v6_10200_0_1, dd_Smed_v6_10200_0_1, [RH, Score=337, Expect=1e-107]} {RNA1509_9622} {RNA1310_5189, RNA1509_9622} {RNA1509_9622, RNA815_3770}
54. MligTC455_24579 103 2.14 Mlig455_003042, Mlig455_003334

Neo: -

Age: Up-Down-Down

 KCTD1 0.952 - - - - - 0.952

Mlig455_003042 {REF} {Length: 2750} {RNA1509_34279} {RNA1310_18990} {RNA815_11695}

Mlig455_003334 {REF} {Length: 4230} {Pfam: Phage integrase family [PF00589.24, score=19.9]} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=65.9, Expect=2e-10]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=65.1, Expect=2e-10]} {RNA1310_18990} {RNA815_11695}
55. MligTC455_31339 445 9.27 Mlig455_006071, Mlig455_053223

Neo: -

Age: -

 NYNRIN, POLM 0.952 - - - - - 0.952

Mlig455_006071 {REF} {Length: 7416} {Pfam: DNA polymerase beta thumb [PF14791.8, score=75.5]; Integrase zinc binding domain [PF17921.3, score=59.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.0]; Integrase core domain [PF00665.28, score=45.1]; Fingers domain of DNA polymerase lambda [PF10391.11, score=24.2]; DNA polymerase beta palm [PF14792.8, score=20.8]} {Human: ENSG00000122678, POLM, DNA polymerase mu, [Score=214, Expect=3e-59]} {Mouse: ENSMUSG00000020474, Polm, polymerase (DNA directed), mu, [RH, Score=229, Expect=2e-64]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=127, Expect=2e-29]} {RNA1509_18343} {RNA1310_8091.1} {RNA815_3041}

Mlig455_053223 {REF} {Length: 2426} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.1]; Integrase core domain [PF00665.28, score=46.3]; Integrase core domain [PF13683.8, score=18.4]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.9, Expect=6e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=94.0, Expect=4e-19]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=118, Expect=4e-27]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}
56. MligTC455_33955 1315 27.41 Mlig455_057554

Neo: Int S/G2/M

Age: -

 STRIP1 0.952 - - - - - 0.952 Mlig455_057554 {REF} {Length: 3620} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3402) [PF11882.10, score=315.4]; N1221-like protein [PF07923.15, score=147.5]} {Human: ENSG00000143093, STRIP1, striatin interacting protein 1, [RH, Score=728, Expect=0.0]; ENSG00000128578, STRIP2, striatin interacting protein 2, [RH, Score=696, Expect=0.0]} {Mouse: ENSMUSG00000014601, Strip1, striatin interacting protein 1, [RH, Score=728, Expect=0.0]; ENSMUSG00000039629, Strip2, striatin interacting protein 2, [RH, Score=694, Expect=0.0]} {Dmel: FBgn0035437, Strip, Striatin interacting protein, [RH, Score=492, Expect=3e-159]} {Celegans: WBGene00017349, farl-11, FAR (Factor ARrest) Like, [RH, Score=468, Expect=8e-150]} {Smed: dd_Smed_v6_2332_0_1, dd_Smed_v6_2332_0_1, [RH, Score=555, Expect=0.0]} {RNA1509_18715, RNA1509_27157, RNA1509_30657, RNA1509_39552, RNA1509_56414, RNA1509_6572} {RNA1310_3042, RNA1509_18715, RNA1509_27157, RNA1509_30657, RNA1509_39552, RNA1509_56414, RNA1509_6572} {RNA1509_18715, RNA1509_27157, RNA1509_30657, RNA1509_39552, RNA1509_56414, RNA1509_6572, RNA815_696}
57. MligTC455_31550 339 7.07 Mlig455_057441

Neo: -

Age: -

 RBM10 0.951 - - - - - 0.951 Mlig455_057441 {REF} {Length: 3693} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.9]; OCRE domain [PF17780.3, score=47.3]; G-patch domain [PF01585.25, score=44.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.3]} {Human: ENSG00000182872, RBM10, RNA binding motif protein 10, [RH, Score=328, Expect=1e-96]} {Mouse: ENSMUSG00000031060, Rbm10, RNA binding motif protein 10, [RH, Score=330, Expect=7e-98]} {Dmel: FBgn0031319, CG4896, [RH, Score=296, Expect=7e-86]} {Celegans: WBGene00020346, rbm-5, RNA Binding Motif protein homolog, [RH, Score=115, Expect=6e-26]} {Smed: dd_Smed_v6_2392_0_4, dd_Smed_v6_2392_0_4, [RH, Score=208, Expect=8e-56]} {RNA1509_10003} {RNA1310_1240.1} {RNA815_5113}
58. MligTC455_21493 859 17.89 Mlig455_059385

Neo: -

Age: Down-Down-Up

 YWHAE 0.95 - - - - - 0.950 Mlig455_059385 {REF} {Length: 1860} {Pfam: 14-3-3 protein [PF00244.22, score=353.7]} {Human: ENSG00000274474, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=392, Expect=3e-139]; ENSG00000108953, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=392, Expect=3e-139]} {Mouse: ENSMUSG00000020849, Ywhae, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide, [RH, Score=392, Expect=2e-139]} {Dmel: FBgn0020238, 14-3-3epsilon, [RH, Score=388, Expect=8e-138]} {Celegans: WBGene00003920, par-5, 14-3-3-like protein 1, [Score=310, Expect=3e-107]} {Smed: dd_Smed_v6_1702_0_1, dd_Smed_v6_1702_0_1, [RH, Score=360, Expect=3e-127]} {RNA1509_19788, RNA1509_2790} {RNA1310_17239.1, RNA1509_19788} {RNA1509_19788, RNA815_6314.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA