TomoSeq data search

Data search

Results for MligTC455_17694

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17694

190

3.96

Mlig455_057923, Mlig455_057953

Neo: -

Age: -

Region-enriched R5: 1.721/0.03704

UBAP1

Mlig455_057923 {REF} {Length: 1909} {TRANSSPLICED} {Human: ENSG00000165006, UBAP1, ubiquitin associated protein 1, [Score=71.6, Expect=1e-12]} {Smed: dd_Smed_v6_13955_0_1, dd_Smed_v6_13955_0_1, [Score=48.1, Expect=2e-06]} {RNA1509_26691} {RNA1310_4884} {RNA815_2151}

Mlig455_057953 {REF} {Length: 1837} {TRANSSPLICED} {Human: ENSG00000165006, UBAP1, ubiquitin associated protein 1, [Score=72.8, Expect=5e-13]} {Mouse: ENSMUSG00000028437, Ubap1, ubiquitin-associated protein 1, [Score=69.7, Expect=3e-12]} {Smed: dd_Smed_v6_13955_0_1, dd_Smed_v6_13955_0_1, [Score=48.5, Expect=1e-06]} {RNA1509_48668} {RNA1310_4884} {RNA815_2151}

Cumulative graph for MligTC455_17694

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.605	2.344	0.58456	1.00000
RegionR2	0.509	2.344	0.46797	0.85370
RegionR3	1.386	2.344	0.04804	0.38368
RegionR4	0.713	2.344	0.27611	0.58280
RegionR5	1.721	2.344	0.00546	0.03704
RegionR6	0.43	2.344	0.50167	1.00000
RegionR7	-5.621	2.344	0.01024	0.17390
RegionR8	0.258	2.344	0.67791	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.746	2.344	0.12321	0.85247
RegenerationR2	-1.161	2.344	0.08605	0.47190
RegenerationR3	-1.217	2.344	0.05485	0.40255
RegenerationR4	0.106	2.344	0.85532	1.00000
RegenerationR5	0.063	2.344	0.90056	1.00000
RegenerationR6	0.567	2.344	0.40780	0.74252
RegenerationBL	1.244	2.344	0.34100	0.70759
RegenerationTP	2.345	2.344	0.16786	0.60007

Genes with expression patterns similar to MligTC455_17694

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17694	190	3.96	Mlig455_057923, Mlig455_057953	Neo: - Age: - Region-enriched R5: 1.721/0.03704	UBAP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_057923 {REF} {Length: 1909} {TRANSSPLICED} {Human: ENSG00000165006, UBAP1, ubiquitin associated protein 1, [Score=71.6, Expect=1e-12]} {Smed: dd_Smed_v6_13955_0_1, dd_Smed_v6_13955_0_1, [Score=48.1, Expect=2e-06]} {RNA1509_26691} {RNA1310_4884} {RNA815_2151} Mlig455_057953 {REF} {Length: 1837} {TRANSSPLICED} {Human: ENSG00000165006, UBAP1, ubiquitin associated protein 1, [Score=72.8, Expect=5e-13]} {Mouse: ENSMUSG00000028437, Ubap1, ubiquitin-associated protein 1, [Score=69.7, Expect=3e-12]} {Smed: dd_Smed_v6_13955_0_1, dd_Smed_v6_13955_0_1, [Score=48.5, Expect=1e-06]} {RNA1509_48668} {RNA1310_4884} {RNA815_2151}
2.	MligTC455_49634	528	11	Mlig455_035189	Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 1.393/0.00030		1.733	-	-	-	-	0.781	0.952	Mlig455_035189 {REF} {Length: 943} {TRANSSPLICED} {RNA1509_44306, RNA1509_51054} {RNA1310_32565, RNA1509_44306, RNA1509_51054} {RNA1509_44306, RNA1509_51054, RNA815_33208}
3.	MligTC455_18876	179	3.73	Mlig455_030924	Neo: - Age: Up-Up-Up, logFC(26M/2M)=0.850	SLC18B1	1.707	-	-	-	-	0.736	0.971	Mlig455_030924 {REF} {Length: 2054} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=152.2]} {Human: ENSG00000146409, SLC18B1, solute carrier family 18 member B1, [Score=206, Expect=2e-60]} {Mouse: ENSMUSG00000037455, Slc18b1, solute carrier family 18, subfamily B, member 1, [Score=206, Expect=1e-60]} {Celegans: WBGene00018860, vpat-1, Vesicular PolyAmine Transporter, [Score=232, Expect=1e-70]} {Smed: dd_Smed_v6_5294_0_1, dd_Smed_v6_5294_0_1, [RH, Score=105, Expect=2e-24]} {RNA1509_9855} {RNA1310_13054.1} {RNA815_4605}
4.	MligTC455_48847	775	16.14	Mlig455_039871	Neo: Irradiation Age: -	CXXC1	1.679	-	-	-	-	0.725	0.954	Mlig455_039871 {REF} {Length: 1612} {TRANSSPLICED} {Pfam: CpG binding protein C-terminal domain [PF12269.10, score=195.7]; PHD-finger [PF00628.31, score=43.5]; PHD-finger [PF13831.8, score=19.9]} {Human: ENSG00000154832, CXXC1, CXXC finger protein 1, [RH, Score=213, Expect=1e-61]} {Mouse: ENSMUSG00000024560, Cxxc1, CXXC finger 1 (PHD domain), [RH, Score=215, Expect=2e-62]} {Dmel: FBgn0030121, Cfp1, CXXC finger protein 1, [RH, Score=197, Expect=5e-56]} {Celegans: WBGene00006384, taf-3, TAF (TBP-associated transcription factor) family, [Score=54.7, Expect=1e-07]} {Smed: dd_Smed_v6_15324_0_3, dd_Smed_v6_15324_0_3, [RH, Score=129, Expect=1e-35]} {RNA1509_23778, RNA1509_24194, RNA1509_42462} {RNA1310_19043, RNA1509_23778, RNA1509_24194, RNA1509_42462} {RNA1509_23778, RNA1509_24194, RNA1509_42462, RNA815_39759}
5.	MligTC455_25015	110	2.3	Mlig455_053157	Neo: - Age: Down-Up-Down	TRPM7	0.99	-	-	0.990	-	-	-	Mlig455_053157 {REF} {Length: 5514} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=67.2]; Ankyrin repeats (3 copies) [PF12796.9, score=62.6]; Ankyrin repeats (many copies) [PF13857.8, score=51.4]; Ion transport protein [PF00520.33, score=37.7]; Ankyrin repeat [PF13606.8, score=29.8]; Ankyrin repeat [PF00023.32, score=21.8]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=87.8, Expect=1e-16]} {Mouse: ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=89.4, Expect=3e-17]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=88.6, Expect=4e-17]} {Celegans: WBGene00001795, gtl-1, GTL-1; Gon-Two Like (TRP subfamily), [Score=81.6, Expect=4e-15]} {Smed: dd_Smed_v6_11259_0_9, dd_Smed_v6_11259_0_9, [Score=100, Expect=3e-21]} {RNA1509_55069} {RNA1310_2006} {RNA815_2659.1}
6.	MligTC455_16219	160	3.33	Mlig455_046926	Neo: - Age: - Region-enriched R7: 2.535/0.01658 Region-enriched R6: 2.155/0.01360		0.969	-	-	-	-	0.969	-	Mlig455_046926 {REF} {Length: 3093} {RNA1509_37336} {RNA1310_6936.1} {RNA815_9561.1}
7.	MligTC455_24214	86	1.78	Mlig455_031438	Neo: - Age: -		0.968	-	-	-	-	-	0.968	Mlig455_031438 {REF} {Length: 2355} {RNA1509_15660} {RNA1310_6657.1} {RNA815_2791.1}
8.	MligTC455_36783	75	1.56	Mlig455_011085, Mlig455_058467	Neo: - Age: -		0.965	-	-	0.965	-	-	-	Mlig455_011085 {REF} {Length: 320} {NoTransDecoderORF} {RNA1509_36726} {RNA1310_45140} Mlig455_058467 {REF} {Length: 5435} {NoTransDecoderORF} {RNA1509_48697} {RNA1310_46804} {RNA815_43024}
9.	MligTC455_30117	2604	54.25	Mlig455_013959, Mlig455_019121, Mlig455_043815, Mlig455_058653	Neo: - Age: logFC(26M/2M)=1.138 Region-enriched R5: 1.583/0.00000 Regeneration-upregulated BL: 1.433 Regeneration-enriched BL: 1.433		0.956	-	-	-	-	-	0.956	Mlig455_013959 {REF} {Length: 2658} {Pfam: Protein of unknown function (DUF2759) [PF10958.10, score=18.2]} {RNA1509_23205} {RNA1310_58264} {RNA815_16209.1} Mlig455_019121 {REF} {Length: 335} {NoTransDecoderORF} {RNA1509_24730} {RNA1310_72465} {RNA815_3035.2} Mlig455_043815 {REF} {Length: 292} {NoTransDecoderORF} {RNA1509_24730} {RNA1310_72465} {RNA815_3035.2} Mlig455_058653 {REF} {Length: 3990} {TRANSSPLICED} {RNA1509_9107} {RNA1310_13804} {RNA815_857.1}
10.	MligTC455_52804	6	0.13	Mlig455_054307	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_054307 {REF} {Length: 527} {NoTransDecoderORF} {RNA1509_33264} {RNA1310_126161}
11.	MligTC455_50512	131	2.73	Mlig455_039758	Neo: - Age: -	HDAC11	0.952	-	0.952	-	-	-	-	Mlig455_039758 {REF} {Length: 3090} {TRANSSPLICED} {Pfam: Histone deacetylase domain [PF00850.21, score=139.2]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [Score=301, Expect=2e-101]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [Score=303, Expect=3e-102]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [Score=270, Expect=2e-89]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [Score=252, Expect=1e-82]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [Score=244, Expect=2e-79]} {RNA1310_29298} {RNA815_14482}

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