TomoSeq data search

Data search

Results for MligTC455_17696

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17696

104

2.17

Mlig455_057958

Neo: -

Age: -

Mlig455_057958 {REF} {Length: 3027} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=19.0]} {RNA1509_48668, RNA1509_53364} {RNA1310_4884, RNA1509_53364} {RNA1509_53364, RNA815_2151}

Cumulative graph for MligTC455_17696

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.331	1.958	0.89904	1.00000
RegionR2	0.945	1.958	0.33138	0.72323
RegionR3	0.885	1.958	0.24094	0.78223
RegionR4	0.477	1.958	0.50369	0.83047
RegionR5	1.37	1.958	0.04274	0.16719
RegionR6	0.678	1.958	0.36969	0.95086
RegionR7	-5.162	1.958	0.03184	0.33970
RegionR8	1.139	1.958	0.32690	0.96049

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.66	1.958	0.58095	1.00000
RegenerationR2	0.338	1.958	0.64324	0.93279
RegenerationR3	-0.305	1.958	0.70344	0.94893
RegenerationR4	-0.004	1.958	0.99786	1.00000
RegenerationR5	-0.197	1.958	0.77516	0.98032
RegenerationR6	0.159	1.958	0.85190	1.00000
RegenerationBL	0.611	1.958	0.62600	0.96827
RegenerationTP	0.55	1.958	0.67029	1.00000

Genes with expression patterns similar to MligTC455_17696

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17696	104	2.17	Mlig455_057958	Neo: - Age: -		5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_057958 {REF} {Length: 3027} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=19.0]} {RNA1509_48668, RNA1509_53364} {RNA1310_4884, RNA1509_53364} {RNA1509_53364, RNA815_2151}
2.	MligTC455_17695	94	1.95	Mlig455_057924	Neo: - Age: -		4.83	0.986	0.992	-	0.895	0.962	0.995	Mlig455_057924 {REF} {Length: 326} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_53364} {RNA1310_4884} {RNA815_2151}
3.	MligTC455_47150	1035	21.57	Mlig455_015744, Mlig455_049450	Neo: - Age: - Region-enriched R5: 1.513/0.00315	MFSD9	1.842	-	-	-	0.864	-	0.978	Mlig455_015744 {REF} {Length: 1507} {Pfam: Major Facilitator Superfamily [PF07690.18, score=41.2]} {Human: ENSG00000135953, MFSD9, major facilitator superfamily domain containing 9, [Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000041945, Mfsd9, major facilitator superfamily domain containing 9, [Score=90.1, Expect=3e-19]} {Smed: dd_Smed_v6_9599_0_1, dd_Smed_v6_9599_0_1, [Score=145, Expect=2e-39]} {RNA1509_53696} {RNA1310_20924} {RNA815_32582} Mlig455_049450 {REF} {Length: 2590} {Pfam: Major Facilitator Superfamily [PF07690.18, score=50.6]} {Human: ENSG00000135953, MFSD9, major facilitator superfamily domain containing 9, [RH, Score=109, Expect=4e-25]} {Mouse: ENSMUSG00000041945, Mfsd9, major facilitator superfamily domain containing 9, [RH, Score=121, Expect=2e-29]} {Smed: dd_Smed_v6_9599_0_1, dd_Smed_v6_9599_0_1, [RH, Score=183, Expect=1e-52]} {RNA1509_53696} {RNA1310_20924} {RNA815_32582}
4.	MligTC455_34816	2518	52.47	Mlig455_009861	Neo: - Age: - Region-enriched R5: 1.172/0.00004 Region-enriched R4: 1.029/0.01177	GYS1	1.691	-	-	-	0.736	-	0.955	Mlig455_009861 {REF} {Length: 4496} {Pfam: Glycogen synthase [PF05693.15, score=1066.3]; Glycosyl transferases group 1 [PF00534.22, score=24.3]; Glycosyl transferases group 1 [PF13692.8, score=20.4]} {Human: ENSG00000104812, GYS1, glycogen synthase 1, [RH, Score=816, Expect=0.0]; ENSG00000111713, GYS2, glycogen synthase 2, [RH, Score=786, Expect=0.0]} {Mouse: ENSMUSG00000003865, Gys1, glycogen synthase 1, muscle, [RH, Score=813, Expect=0.0]; ENSMUSG00000030244, Gys2, glycogen synthase 2, [RH, Score=776, Expect=0.0]} {Dmel: FBgn0266064, GlyS, Glycogen synthase, [RH, Score=856, Expect=0.0]} {Celegans: WBGene00001793, gsy-1, Glycogen [starch] synthase, [RH, Score=773, Expect=0.0]} {Smed: dd_Smed_v6_3119_0_1, dd_Smed_v6_3119_0_1, [RH, Score=912, Expect=0.0]} {RNA1509_10273, RNA1509_10369, RNA1509_16995, RNA1509_2838, RNA1509_56751, RNA1509_7678} {RNA1310_4776, RNA1509_10273, RNA1509_10369, RNA1509_16995, RNA1509_2838, RNA1509_56751, RNA1509_7678} {RNA1509_10273, RNA1509_10369, RNA1509_16995, RNA1509_2838, RNA1509_56751, RNA1509_7678, RNA815_2299}
5.	MligTC455_44706	695	14.48	Mlig455_048568, Mlig455_049046	Neo: Int S/G2/M Age: - Region-enriched R5: 1.781/0.00154		1.67	-	-	-	0.718	-	0.952	Mlig455_048568 {REF} {Length: 3178} {Pfam: Tudor domain [PF00567.26, score=60.2]} {RNA1509_8410} {RNA1310_5719.1} {RNA815_14685} Mlig455_049046 {REF} {Length: 3717} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=60.1]} {RNA1509_44602, RNA1509_8410} {RNA1310_5719.1, RNA1509_44602} {RNA1509_44602, RNA815_14685}
6.	MligTC455_47719	292	6.08	Mlig455_017393	Neo: - Age: -		0.977	-	-	-	-	-	0.977	Mlig455_017393 {REF} {Length: 1081} {NoTransDecoderORF} {RNA1509_14952} {RNA1310_8790} {RNA815_3189}
7.	MligTC455_39118	330	6.87	Mlig455_031507, Mlig455_067691	Neo: - Age: -	KCTD7	0.972	-	-	-	-	-	0.972	Mlig455_031507 {REF} {Length: 3066} {Pfam: BTB/POZ domain [PF02214.24, score=56.0]; BTB/POZ domain [PF16017.7, score=20.2]} {Human: ENSG00000243335, KCTD7, potassium channel tetramerization domain containing 7, [RH, Score=120, Expect=3e-31]} {Mouse: ENSMUSG00000034110, Kctd7, potassium channel tetramerisation domain containing 7, [RH, Score=119, Expect=4e-31]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [Score=76.6, Expect=5e-16]} {Celegans: WBGene00016871, inso-1, INSOmniac (Drosophila sleep affecting) homolog, [Score=63.2, Expect=3e-11]} {Smed: dd_Smed_v6_10272_0_1, dd_Smed_v6_10272_0_1, [RH, Score=238, Expect=6e-78]} {RNA1509_28825} {RNA1310_27315, RNA1509_28825} {RNA1509_28825, RNA815_12236} Mlig455_067691 {REF} {Length: 3121} {Pfam: BTB/POZ domain [PF02214.24, score=56.0]; BTB/POZ domain [PF16017.7, score=20.2]} {Human: ENSG00000243335, KCTD7, potassium channel tetramerization domain containing 7, [RH, Score=120, Expect=2e-31]} {Mouse: ENSMUSG00000034110, Kctd7, potassium channel tetramerisation domain containing 7, [RH, Score=120, Expect=3e-31]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [Score=76.6, Expect=5e-16]} {Celegans: WBGene00016871, inso-1, INSOmniac (Drosophila sleep affecting) homolog, [Score=63.2, Expect=3e-11]} {Smed: dd_Smed_v6_10272_0_1, dd_Smed_v6_10272_0_1, [RH, Score=238, Expect=5e-78]} {RNA1509_28825} {RNA1310_27315} {RNA815_12236}
8.	MligTC455_45454	299	6.24	Mlig455_028626	Neo: Int S/G2/M Age: Down-Up-Up	BOP1	0.968	-	-	-	-	-	0.968	Mlig455_028626 {REF} {Length: 3544} {TRANSSPLICED} {Pfam: BOP1NT (NUC169) domain [PF08145.14, score=319.1]; WD domain, G-beta repeat [PF00400.34, score=49.4]} {Human: ENSG00000285301, BOP1, block of proliferation 1, [RH, Score=476, Expect=4e-158]; ENSG00000261236, BOP1, block of proliferation 1, [RH, Score=476, Expect=4e-158]} {Mouse: ENSMUSG00000022557, Bop1, block of proliferation 1, [RH, Score=465, Expect=2e-154]} {Dmel: FBgn0028744, CG5033, [RH, Score=468, Expect=3e-155]} {Celegans: WBGene00012978, Y48B6A.1, Ribosome biogenesis protein BOP1 homolog, [RH, Score=441, Expect=3e-146]} {Smed: dd_Smed_v6_11041_0_1, dd_Smed_v6_11041_0_1, [RH, Score=309, Expect=4e-95]} {RNA1509_7833} {RNA1310_11209.2} {RNA815_3705}
9.	MligTC455_54083	975	20.32	Mlig455_066848	Neo: Irradiation Age: logFC(26M/2M)=0.602 Region-enriched R5: 1.847/0.00008	GFI1	0.966	-	-	-	-	-	0.966	Mlig455_066848 {REF} {Length: 2798} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=31.3]; C2H2-type zinc finger [PF13894.8, score=27.0]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=22.2]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=79.7, Expect=2e-15]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=78.2, Expect=2e-15]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=81.3, Expect=6e-16]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=78.2, Expect=3e-15]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=85.9, Expect=2e-17]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=80.5, Expect=2e-16]} {Smed: dd_Smed_v6_2946_0_1, dd_Smed_v6_2946_0_1, [RH, Score=183, Expect=1e-51]} {RNA1509_4057} {RNA1310_7337} {RNA815_12480}
10.	MligTC455_33938	921	19.18	Mlig455_043743, Mlig455_047482	Neo: - Age: -	HNRNPH2, TBC1D24	0.964	-	-	-	-	-	0.964	Mlig455_043743 {REF} {Length: 3480} {Pfam: TLD [PF07534.18, score=56.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=35.8]} {Human: ENSG00000162065, TBC1D24, TBC1 domain family member 24, [Score=102, Expect=8e-22]} {Mouse: ENSMUSG00000036473, Tbc1d24, TBC1 domain family, member 24, [Score=99.4, Expect=4e-21]} {Dmel: FBgn0032901, sky, skywalker, [Score=111, Expect=4e-25]} {Celegans: WBGene00016292, tbc-7, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=92.0, Expect=6e-19]} {Smed: dd_Smed_v6_5542_0_1, dd_Smed_v6_5542_0_1, [Score=109, Expect=5e-25]} {RNA1509_8289} {RNA1310_8633.1} {RNA815_10795} Mlig455_047482 {REF} {Length: 4001} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.0]; TLD [PF07534.18, score=56.1]} {Human: ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [Score=133, Expect=2e-32]; ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [Score=130, Expect=7e-34]; ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [Score=130, Expect=1e-31]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [Score=129, Expect=3e-31]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [Score=133, Expect=2e-32]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [Score=131, Expect=3e-32]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [Score=130, Expect=1e-31]} {Dmel: FBgn0259139, glo, glorund, [Score=122, Expect=2e-28]} {Celegans: WBGene00006367, sym-2, RNA-binding protein sym-2, [Score=114, Expect=3e-27]} {Smed: dd_Smed_v6_2383_0_7, dd_Smed_v6_2383_0_7, [Score=116, Expect=4e-29]} {RNA1509_5104} {RNA1310_8633.1} {RNA815_10795}
11.	MligTC455_42848	404	8.41	Mlig455_060560	Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=-0.725 Region-specific R4: 1.955		0.961	-	-	-	-	-	0.961	Mlig455_060560 {REF} {Length: 1566} {RNA1509_29994} {RNA1310_37304} {RNA815_17511}
12.	MligTC455_19865	413	8.61	Mlig455_055866	Neo: Irradiation Age: Down-Up-Down		0.958	-	-	-	-	-	0.958	Mlig455_055866 {REF} {Length: 1701} {TRANSSPLICED} {Pfam: M-phase-specific PLK1-interacting protein [PF15502.8, score=30.4]} {RNA1509_10545, RNA1509_25963} {RNA1310_33995, RNA1509_10545, RNA1509_25963} {RNA1509_10545, RNA1509_25963, RNA815_824}
13.	MligTC455_43481	1770	36.88	Mlig455_060289, Mlig455_066804, Mlig455_066869	Neo: - Age: -	RIC8B	0.953	-	-	-	-	-	0.953	Mlig455_060289 {REF} {Length: 2508} {TRANSSPLICED} {Pfam: Guanine nucleotide exchange factor synembryn [PF10165.11, score=238.5]} {Human: ENSG00000111785, RIC8B, RIC8 guanine nucleotide exchange factor B, [RH, Score=154, Expect=1e-39]; ENSG00000177963, RIC8A, RIC8 guanine nucleotide exchange factor A, [RH, Score=150, Expect=2e-38]} {Mouse: ENSMUSG00000035620, Ric8b, RIC8 guanine nucleotide exchange factor B, [RH, Score=151, Expect=8e-39]} {Dmel: FBgn0028292, ric8a, [RH, Score=169, Expect=3e-45]} {Celegans: WBGene00004367, ric-8, Synembryn, [RH, Score=126, Expect=2e-30]} {Smed: dd_Smed_v6_1142_0_2, dd_Smed_v6_1142_0_2, [RH, Score=180, Expect=4e-50]} {RNA1509_19238} {RNA1310_8529} {RNA815_16855} Mlig455_066804 {REF} {Length: 2522} {TRANSSPLICED} {Pfam: Guanine nucleotide exchange factor synembryn [PF10165.11, score=242.1]} {Human: ENSG00000111785, RIC8B, RIC8 guanine nucleotide exchange factor B, [RH, Score=157, Expect=7e-41]; ENSG00000177963, RIC8A, RIC8 guanine nucleotide exchange factor A, [RH, Score=151, Expect=9e-39]} {Mouse: ENSMUSG00000035620, Ric8b, RIC8 guanine nucleotide exchange factor B, [RH, Score=155, Expect=4e-40]} {Dmel: FBgn0028292, ric8a, [RH, Score=173, Expect=2e-46]} {Celegans: WBGene00004367, ric-8, Synembryn, [RH, Score=125, Expect=2e-30]} {Smed: dd_Smed_v6_1142_0_2, dd_Smed_v6_1142_0_2, [RH, Score=182, Expect=6e-51]} {RNA1509_19238} {RNA1310_8529, RNA1509_19238} {RNA1509_19238, RNA815_16855} Mlig455_066869 {REF} {Length: 2510} {TRANSSPLICED} {Pfam: Guanine nucleotide exchange factor synembryn [PF10165.11, score=242.1]} {Human: ENSG00000111785, RIC8B, RIC8 guanine nucleotide exchange factor B, [RH, Score=156, Expect=3e-40]; ENSG00000177963, RIC8A, RIC8 guanine nucleotide exchange factor A, [RH, Score=152, Expect=4e-39]} {Mouse: ENSMUSG00000035620, Ric8b, RIC8 guanine nucleotide exchange factor B, [RH, Score=153, Expect=1e-39]} {Dmel: FBgn0028292, ric8a, [RH, Score=171, Expect=6e-46]} {Celegans: WBGene00004367, ric-8, Synembryn, [RH, Score=126, Expect=2e-30]} {Smed: dd_Smed_v6_1142_0_2, dd_Smed_v6_1142_0_2, [RH, Score=182, Expect=8e-51]} {RNA1509_19238} {RNA1310_8529} {RNA815_16855}
14.	MligTC455_53116	293	6.1	Mlig455_029079	Neo: - Age: - Region-enriched R5: 1.484/0.00418	RILPL1	0.952	-	-	-	-	-	0.952	Mlig455_029079 {REF} {Length: 2208} {TRANSSPLICED} {Pfam: JNK_SAPK-associated protein-1 [PF09744.11, score=120.3]; Rab interacting lysosomal protein [PF11461.10, score=44.5]; Bap31/Bap29 cytoplasmic coiled-coil domain [PF18035.3, score=18.5]} {Human: ENSG00000188026, RILPL1, Rab interacting lysosomal protein like 1, [Score=169, Expect=7e-48]} {Mouse: ENSMUSG00000029392, Rilpl1, Rab interacting lysosomal protein-like 1, [Score=177, Expect=1e-50]} {Dmel: FBgn0024985, CG11448, [Score=145, Expect=7e-39]} {Celegans: WBGene00007860, rilp-1, RILP (Rab7-Interacting Lysosomal Protein) homolog, [Score=167, Expect=2e-47]} {Smed: dd_Smed_v6_4713_0_1, dd_Smed_v6_4713_0_1, [Score=251, Expect=1e-79]} {RNA1509_50935} {RNA1310_13916.1, RNA1509_50935} {RNA1509_50935, RNA815_17825.1}
15.	MligTC455_38834	216	4.5	Mlig455_002859, Mlig455_033192	Neo: - Age: Up-Down-Down	POLR2A	0.951	-	-	-	-	0.951	-	Mlig455_002859 {REF} {Length: 2842} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [Score=55.1, Expect=4e-07]} {Mouse: ENSMUSG00000005198, Polr2a, polymerase (RNA) II (DNA directed) polypeptide A, [Score=54.7, Expect=3e-07]} {RNA1310_18487} {RNA815_32972} Mlig455_033192 {REF} {Length: 730} {RNA1310_18487} {RNA815_57360}

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