Data search


search
Exact
Search

Results for MligTC455_17753

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17753 35 0.73 Mlig455_003419

Neo: -

Age: Up-Down-Down

RGS4 Mlig455_003419 {REF} {Length: 3782} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=117.5]; Spt20 family [PF12090.10, score=18.7]} {Human: ENSG00000117152, RGS4, regulator of G protein signaling 4, [RH, Score=150, Expect=2e-42]} {Mouse: ENSMUSG00000038530, Rgs4, regulator of G-protein signaling 4, [RH, Score=152, Expect=4e-43]; ENSMUSG00000042671, Rgs8, regulator of G-protein signaling 8, [RH, Score=149, Expect=2e-42]; ENSMUSG00000026360, Rgs2, regulator of G-protein signaling 2, [RH, Score=145, Expect=2e-40]} {Dmel: FBgn0028743, Dhit, Double hit, [Score=121, Expect=4e-31]} {Celegans: WBGene00004350, rgs-7, Regulator of G-protein signaling rgs-7, [RH, Score=134, Expect=1e-33]} {Smed: dd_Smed_v6_8648_0_1, dd_Smed_v6_8648_0_1, [RH, Score=183, Expect=1e-51]} {RNA1509_46096} {RNA1310_12460} {RNA815_18457}

Cumulative graph for MligTC455_17753

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.131 1.205 1.00000 1.00000
RegionR2 3.79 1.205 0.01438 0.12580
RegionR3 0.803 1.205 0.51111 0.99946
RegionR4 0.064 1.205 0.75788 1.00000
RegionR5 -0.585 1.205 0.89479 1.00000
RegionR6 0.016 1.205 0.78855 1.00000
RegionR7 1.731 1.205 0.33488 0.96911
RegionR8 -2.688 1.205 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.645 1.205 0.99981 1.00000
RegenerationR2 -0.141 1.205 0.92927 1.00000
RegenerationR3 0.818 1.205 0.48358 0.85214
RegenerationR4 0.162 1.205 0.93768 1.00000
RegenerationR5 -0.255 1.205 0.75589 0.97366
RegenerationR6 2.341 1.205 0.05898 0.30476
RegenerationBL -1.253 1.205 1.00000 1.00000
RegenerationTP 1.723 1.205 0.50157 0.90155


Genes with expression patterns similar to MligTC455_17753

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17753 35 0.73 Mlig455_003419

Neo: -

Age: Up-Down-Down

RGS4 4 1.000 1.000 - - 1.000 1.000 Mlig455_003419 {REF} {Length: 3782} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=117.5]; Spt20 family [PF12090.10, score=18.7]} {Human: ENSG00000117152, RGS4, regulator of G protein signaling 4, [RH, Score=150, Expect=2e-42]} {Mouse: ENSMUSG00000038530, Rgs4, regulator of G-protein signaling 4, [RH, Score=152, Expect=4e-43]; ENSMUSG00000042671, Rgs8, regulator of G-protein signaling 8, [RH, Score=149, Expect=2e-42]; ENSMUSG00000026360, Rgs2, regulator of G-protein signaling 2, [RH, Score=145, Expect=2e-40]} {Dmel: FBgn0028743, Dhit, Double hit, [Score=121, Expect=4e-31]} {Celegans: WBGene00004350, rgs-7, Regulator of G-protein signaling rgs-7, [RH, Score=134, Expect=1e-33]} {Smed: dd_Smed_v6_8648_0_1, dd_Smed_v6_8648_0_1, [RH, Score=183, Expect=1e-51]} {RNA1509_46096} {RNA1310_12460} {RNA815_18457}
2. MligTC455_30814 51 1.07 Mlig455_003105, Mlig455_003106

Neo: -

Age: -

1.759 - - - - 0.804 0.955

Mlig455_003105 {REF} {Length: 1284} {TRANSSPLICED} {RNA1509_58333} {RNA1310_55385.1} {RNA815_38567}

Mlig455_003106 {REF} {Length: 2903} {RNA1509_25856} {RNA1310_27220} {RNA815_18032}
3. MligTC455_57097 11 0.23 Mlig455_030298

Neo: -

Age: -

0.996 - - - - 0.996 - Mlig455_030298 {REF} {Length: 353} {NoTransDecoderORF}
4. MligTC455_15729 10 0.21 Mlig455_019877

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.937

0.971 - - - - 0.971 - Mlig455_019877 {REF} {Length: 1683} {NoTransDecoderORF} {RNA1509_16231} {RNA1310_8645} {RNA815_19217}
5. MligTC455_10577 22 0.46 Mlig455_044548

Neo: -

Age: -

0.97 - - - - 0.970 - Mlig455_044548 {REF} {Length: 953} {Pfam: Bacterial protein of unknown function (DUF948) [PF06103.13, score=26.2]; YscO-like protein [PF16789.7, score=22.3]; Type III secretion protein YscO [PF07321.14, score=18.7]} {RNA1509_56109} {RNA1310_140905} {RNA815_33461}
6. MligTC455_46649 100 2.09 Mlig455_023901

Neo: -

Age: Up-Down-Up

Region-enriched R2: 5.216/0.00086

SLC46A2 0.967 0.967 - - - - - Mlig455_023901 {REF} {Length: 2695} {Pfam: Major Facilitator Superfamily [PF07690.18, score=79.0]} {Human: ENSG00000119457, SLC46A2, solute carrier family 46 member 2, [Score=71.6, Expect=1e-12]} {Mouse: ENSMUSG00000029650, Slc46a3, solute carrier family 46, member 3, [Score=77.4, Expect=1e-14]} {Dmel: FBgn0030576, CG15890, [RH, Score=100, Expect=5e-22]} {Celegans: WBGene00016705, C46C11.2, [RH, Score=95.9, Expect=6e-21]} {Smed: dd_Smed_v6_10822_0_1, dd_Smed_v6_10822_0_1, [Score=344, Expect=1e-113]} {RNA1509_40290} {RNA1310_13436} {RNA815_19265}
7. MligTC455_25697 58 1.21 Mlig455_011073, Mlig455_049811

Neo: -

Age: -

0.961 - - - - - 0.961

Mlig455_011073 {REF} {Length: 1854} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15725} {RNA1310_15694.1} {RNA815_27794}

Mlig455_049811 {REF} {Length: 3079} {NoTransDecoderORF} {RNA1509_40708} {RNA1310_33225.1} {RNA815_26884}
8. MligTC455_50741 80 1.66 Mlig455_028260

Neo: -

Age: logFC(26M/2M)=-0.458

Region-enriched R2: 5.649/0.02620

SFRP5 0.959 0.959 - - - - - Mlig455_028260 {REF} {Length: 2580} {Pfam: Fz domain [PF01392.24, score=93.7]} {Human: ENSG00000120057, SFRP5, secreted frizzled related protein 5, [RH, Score=160, Expect=6e-45]} {Mouse: ENSMUSG00000018822, Sfrp5, secreted frizzled-related sequence protein 5, [RH, Score=159, Expect=2e-44]} {Dmel: FBgn0027342, fz4, frizzled 4, [Score=100, Expect=4e-22]} {Celegans: WBGene00022242, sfrp-1, Secreted Frizzled-Related Protein, [RH, Score=162, Expect=3e-46]} {Smed: dd_Smed_v6_13985_0_1, dd_Smed_v6_13985_0_1, [RH, Score=165, Expect=7e-47]} {RNA1509_19129} {RNA1310_15120, RNA1509_19129} {RNA1509_19129, RNA815_29178}
9. MligTC455_46436 20 0.41 Mlig455_050535

Neo: -

Age: Up-Down-Down

Region-enriched R2: 8.764/0.00037

0.958 0.958 - - - - - Mlig455_050535 {REF} {Length: 3584} {RNA1310_32788} {RNA815_19360}
10. MligTC455_10932 11 0.23 Mlig455_022307, Mlig455_069887

Neo: -

Age: Down-Up-Up

WSCD2 0.957 0.957 - - - - -

Mlig455_022307 {REF} {Length: 844} {Pfam: WSC domain [PF01822.21, score=54.9]; PAN domain [PF00024.28, score=22.0]; MANEC domain [PF07502.16, score=19.4]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=59.7, Expect=6e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=58.9, Expect=8e-10]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=58.5, Expect=8e-10]} {RNA1509_46267} {RNA1310_51656} {RNA815_29077.2}

Mlig455_069887 {REF} {Length: 1280} {Pfam: WSC domain [PF01822.21, score=50.5]} {RNA1509_53783} {RNA1310_29335.2} {RNA815_9084.1}
11. MligTC455_40714 93 1.94 Mlig455_008848

Neo: -

Age: -

Region-enriched R2: 5.100/0.02617

0.955 0.955 - - - - - Mlig455_008848 {REF} {Length: 2258} {RNA1310_21537} {RNA815_13165}
12. MligTC455_02271 9 0.18 Mlig455_065667

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_065667 {REF} {Length: 1612} {RNA1509_54213} {RNA1310_39235} {RNA815_63371}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA