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Results for MligTC455_17757

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17757 504 10.49 Mlig455_063812

Neo: -

Age: -

 SVEP1 Mlig455_063812 {REF} {Length: 1612} {Pfam: EGF-like domain [PF00008.29, score=23.9]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=49.7, Expect=3e-06]; ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=48.1, Expect=9e-06]} {Dmel: FBgn0259140, CG42255, [Score=62.4, Expect=2e-10]} {RNA1509_35684} {RNA1310_18308} {RNA815_10194.1}

Cumulative graph for MligTC455_17757

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.229 3.581 0.38313 1.00000
RegionR2 -0.377 3.581 0.54217 0.90962
RegionR3 0.037 3.581 0.93789 1.00000
RegionR4 0.151 3.581 0.80303 1.00000
RegionR5 -0.507 3.581 0.33014 0.67502
RegionR6 0.391 3.581 0.43412 0.99583
RegionR7 0.842 3.581 0.12882 0.67567
RegionR8 0.693 3.581 0.32936 0.96242

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.894 3.581 0.59945 1.00000
RegenerationR2 -1.013 3.581 0.08310 0.46376
RegenerationR3 -0.963 3.581 0.09930 0.50267
RegenerationR4 -0.733 3.581 0.21296 0.66012
RegenerationR5 -0.518 3.581 0.38645 0.78966
RegenerationR6 -1.423 3.581 0.01996 0.17460
RegenerationBL -1.067 3.581 0.08806 0.34778
RegenerationTP -1.123 3.581 0.09351 0.47980


Genes with expression patterns similar to MligTC455_17757

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17757 504 10.49 Mlig455_063812

Neo: -

Age: -

 SVEP1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_063812 {REF} {Length: 1612} {Pfam: EGF-like domain [PF00008.29, score=23.9]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=49.7, Expect=3e-06]; ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=48.1, Expect=9e-06]} {Dmel: FBgn0259140, CG42255, [Score=62.4, Expect=2e-10]} {RNA1509_35684} {RNA1310_18308} {RNA815_10194.1}
2. MligTC455_36846 131 2.73 Mlig455_047270, Mlig455_047321

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.729

Region-enriched R8: 3.656/0.01431

 1.775 0.962 - - 0.813 - -

Mlig455_047270 {REF} {Length: 3264} {RNA1509_18471} {RNA1310_10950} {RNA815_5132}

Mlig455_047321 {REF} {Length: 3340} {RNA1509_18471} {RNA1310_10950, RNA1509_18471} {RNA1509_18471, RNA815_5132}
3. MligTC455_41595 483 10.07 Mlig455_065096

Neo: -

Age: -

 0.971 0.971 - - - - - Mlig455_065096 {REF} {Length: 1103} {RNA1310_35732} {RNA815_16408}
4. MligTC455_37160 1139 23.73 Mlig455_015317, Mlig455_032998, Mlig455_068744

Neo: -

Age: logFC(26M/2M)=-0.355

Region-enriched R2: 1.560/0.01222

 TTC28 0.969 0.969 - - - - -

Mlig455_015317 {REF} {Length: 5958} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=63.4]; Tetratricopeptide repeat [PF07719.19, score=51.3]; Tetratricopeptide repeat [PF00515.30, score=40.4]; Tetratricopeptide repeat [PF13181.8, score=39.5]; CHAT domain [PF12770.9, score=37.9]; Tetratricopeptide repeat [PF14559.8, score=23.5]; Tetratricopeptide repeat [PF13431.8, score=22.4]; Tetratricopeptide repeat [PF13176.8, score=20.4]} {Human: ENSG00000100154, TTC28, tetratricopeptide repeat domain 28, [Score=69.3, Expect=7e-11]} {Mouse: ENSMUSG00000033209, Ttc28, tetratricopeptide repeat domain 28, [Score=70.9, Expect=2e-11]} {RNA1509_5411} {RNA1310_761.1} {RNA815_600}

Mlig455_032998 {REF} {Length: 5728} {Pfam: CHAT domain [PF12770.9, score=39.2]} {Human: ENSG00000100154, TTC28, tetratricopeptide repeat domain 28, [Score=67.8, Expect=1e-10]} {Mouse: ENSMUSG00000033209, Ttc28, tetratricopeptide repeat domain 28, [Score=69.3, Expect=3e-11]} {RNA1509_5411} {RNA1310_761.1} {RNA815_600}

Mlig455_068744 {REF} {Length: 5980} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=62.6]; Tetratricopeptide repeat [PF07719.19, score=49.0]; Tetratricopeptide repeat [PF13181.8, score=39.3]; Tetratricopeptide repeat [PF00515.30, score=38.4]; CHAT domain [PF12770.9, score=37.8]; Tetratricopeptide repeat [PF14559.8, score=22.1]; Tetratricopeptide repeat [PF13431.8, score=20.8]; Tetratricopeptide repeat [PF13176.8, score=19.2]} {Human: ENSG00000100154, TTC28, tetratricopeptide repeat domain 28, [Score=66.2, Expect=6e-10]} {Mouse: ENSMUSG00000033209, Ttc28, tetratricopeptide repeat domain 28, [Score=67.8, Expect=1e-10]} {RNA1509_5411} {RNA1310_761.2} {RNA815_600}
5. MligTC455_40579 537 11.2 Mlig455_003404

Neo: -

Age: -

 0.964 0.964 - - - - - Mlig455_003404 {REF} {Length: 4497} {RNA1509_13496, RNA1509_35589} {RNA1310_2557, RNA1509_13496, RNA1509_35589} {RNA1509_13496, RNA1509_35589, RNA815_4433}
6. MligTC455_52199 1032 21.49 Mlig455_031255, Mlig455_031301

Neo: -

Age: Down-Down-Up

 0.961 0.961 - - - - -

Mlig455_031255 {REF} {Length: 1896} {Pfam: Innexin [PF00876.20, score=210.3]} {Celegans: WBGene00002127, inx-5, Innexin-5, [Score=134, Expect=1e-34]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=139, Expect=1e-36]} {RNA1509_2324} {RNA1310_13247} {RNA815_6165.1}

Mlig455_031301 {REF} {Length: 2187} {Pfam: Innexin [PF00876.20, score=210.3]} {Celegans: WBGene00002127, inx-5, Innexin-5, [Score=134, Expect=1e-34]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=139, Expect=2e-36]} {RNA1509_2324} {RNA1310_13247} {RNA815_6165.1}
7. MligTC455_52544 250 5.21 Mlig455_030562

Neo: -

Age: Up-Down-Down

Region-enriched R8: 3.544/0.00108

 0.961 0.961 - - - - - Mlig455_030562 {REF} {Length: 1251} {RNA1310_32103} {RNA815_22028}
8. MligTC455_23310 304 6.34 Mlig455_061447

Neo: -

Age: Down-Up-Down

 0.958 0.958 - - - - - Mlig455_061447 {REF} {Length: 953} {RNA1509_48616} {RNA1310_6959} {RNA815_10949}
9. MligTC455_45543 2247 46.82 Mlig455_022882, Mlig455_022900

Neo: -

Age: -

 CHMP1A 0.958 - - - - 0.958 -

Mlig455_022882 {REF} {Length: 1889} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=44.0]; Regulator of Vps4 activity in the MVB pathway [PF03398.16, score=20.5]} {Human: ENSG00000131165, CHMP1A, charged multivesicular body protein 1A, [RH, Score=225, Expect=9e-75]} {Mouse: ENSMUSG00000000743, Chmp1a, charged multivesicular body protein 1A, [RH, Score=225, Expect=7e-75]} {Dmel: FBgn0036805, Chmp1, Charged multivesicular body protein 1, [Score=155, Expect=3e-47]} {Celegans: WBGene00017735, did-2, Doa4-Independent Degradation, homologous to yeast Did2, [Score=167, Expect=3e-52]} {Smed: dd_Smed_v6_1645_0_1, dd_Smed_v6_1645_0_1, [RH, Score=249, Expect=2e-84]} {RNA1509_18465, RNA1509_3349} {RNA1310_38199, RNA1509_18465, RNA1509_3349} {RNA1509_18465, RNA1509_3349, RNA815_18786}

Mlig455_022900 {REF} {Length: 1828} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=44.0]; Regulator of Vps4 activity in the MVB pathway [PF03398.16, score=20.5]} {Human: ENSG00000131165, CHMP1A, charged multivesicular body protein 1A, [RH, Score=225, Expect=9e-75]} {Mouse: ENSMUSG00000000743, Chmp1a, charged multivesicular body protein 1A, [RH, Score=225, Expect=7e-75]} {Dmel: FBgn0036805, Chmp1, Charged multivesicular body protein 1, [Score=155, Expect=3e-47]} {Celegans: WBGene00017735, did-2, Doa4-Independent Degradation, homologous to yeast Did2, [Score=167, Expect=3e-52]} {Smed: dd_Smed_v6_1645_0_1, dd_Smed_v6_1645_0_1, [RH, Score=249, Expect=2e-84]} {RNA1509_3349} {RNA1310_38199} {RNA815_18786}
10. MligTC455_35681 41 0.86 Mlig455_038828, Mlig455_038839, Mlig455_038918

Neo: -

Age: -

 0.952 0.952 - - - - -

Mlig455_038828 {REF} {Length: 526} {NoTransDecoderORF} {RNA1310_25647.2} {RNA815_12358}

Mlig455_038839 {REF} {Length: 499} {NoTransDecoderORF} {RNA1310_25647.2} {RNA815_12358}

Mlig455_038918 {REF} {Length: 479} {NoTransDecoderORF} {RNA1310_25647.2} {RNA815_12358}
11. MligTC455_21389 173 3.6 Mlig455_012718

Neo: -

Age: -

 SLC9B2 0.95 0.950 - - - - - Mlig455_012718 {REF} {Length: 3209} {Pfam: Sodium/hydrogen exchanger family [PF00999.23, score=114.5]; Sodium/glutamate symporter [PF03616.16, score=18.4]} {Human: ENSG00000164038, SLC9B2, solute carrier family 9 member B2, [Score=320, Expect=3e-100]} {Mouse: ENSMUSG00000050150, Slc9b1, solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1, [RH, Score=303, Expect=5e-94]} {Dmel: FBgn0031865, Nha1, Na[+]/H[+] hydrogen antiporter 1, [Score=257, Expect=4e-75]} {Celegans: WBGene00009618, F41E7.2, [Score=136, Expect=9e-34]} {Smed: dd_Smed_v6_7736_0_2, dd_Smed_v6_7736_0_2, [RH, Score=359, Expect=2e-116]} {RNA1509_19376} {RNA1310_19487} {RNA815_52764}

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