M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_17848

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17848 3372 70.24 Mlig455_030517

Neo: -

Age: -

 ORMDL3 Mlig455_030517 {REF} {Length: 1014} {TRANSSPLICED} {Pfam: ORMDL family [PF04061.16, score=165.5]} {Human: ENSG00000172057, ORMDL3, ORMDL sphingolipid biosynthesis regulator 3, [RH, Score=195, Expect=1e-64]; ENSG00000123353, ORMDL2, ORMDL sphingolipid biosynthesis regulator 2, [RH, Score=186, Expect=4e-61]} {Mouse: ENSMUSG00000038150, Ormdl3, ORM1-like 3 (S. cerevisiae), [RH, Score=195, Expect=1e-64]} {Dmel: FBgn0037110, ORMDL, [RH, Score=138, Expect=2e-42]} {Smed: dd_Smed_v6_4097_0_1, dd_Smed_v6_4097_0_1, [RH, Score=211, Expect=2e-71]} {RNA1509_1183, RNA1509_3380} {RNA1310_15108, RNA1509_3380} {RNA1509_3380, RNA815_17163}

Cumulative graph for MligTC455_17848

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.179 6.282 0.00046 0.07157
RegionR2 0.393 6.282 0.16957 0.51495
RegionR3 0.277 6.282 0.24730 0.79017
RegionR4 0.315 6.282 0.23081 0.52370
RegionR5 0.52 6.282 0.01819 0.09028
RegionR6 0.613 6.282 0.00890 0.15603
RegionR7 -0.022 6.282 0.93807 1.00000
RegionR8 0.083 6.282 0.79830 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.483 6.282 0.65380 1.00000
RegenerationR2 0.028 6.282 0.91282 1.00000
RegenerationR3 0.086 6.282 0.75460 0.96593
RegenerationR4 -0.175 6.282 0.52997 0.88417
RegenerationR5 -0.04 6.282 0.87883 1.00000
RegenerationR6 -0.534 6.282 0.05389 0.29095
RegenerationBL 0.191 6.282 0.48222 0.84711
RegenerationTP 0.607 6.282 0.03682 0.31969


Genes with expression patterns similar to MligTC455_17848

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17848 3372 70.24 Mlig455_030517

Neo: -

Age: -

 ORMDL3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_030517 {REF} {Length: 1014} {TRANSSPLICED} {Pfam: ORMDL family [PF04061.16, score=165.5]} {Human: ENSG00000172057, ORMDL3, ORMDL sphingolipid biosynthesis regulator 3, [RH, Score=195, Expect=1e-64]; ENSG00000123353, ORMDL2, ORMDL sphingolipid biosynthesis regulator 2, [RH, Score=186, Expect=4e-61]} {Mouse: ENSMUSG00000038150, Ormdl3, ORM1-like 3 (S. cerevisiae), [RH, Score=195, Expect=1e-64]} {Dmel: FBgn0037110, ORMDL, [RH, Score=138, Expect=2e-42]} {Smed: dd_Smed_v6_4097_0_1, dd_Smed_v6_4097_0_1, [RH, Score=211, Expect=2e-71]} {RNA1509_1183, RNA1509_3380} {RNA1310_15108, RNA1509_3380} {RNA1509_3380, RNA815_17163}
2. MligTC455_26046 634 13.21 Mlig455_015613

Neo: -

Age: -

Region-enriched R5: 1.018/0.02615

 1.757 - - 0.795 - 0.962 - Mlig455_015613 {REF} {Length: 778} {NoTransDecoderORF} {RNA1509_36921} {RNA1310_51590, RNA1509_36921} {RNA1509_36921, RNA815_20265.2}
3. MligTC455_53126 3959 82.49 Mlig455_055911

Neo: -

Age: -

Region-enriched R5: 1.127/0.00002

 0.955 - - - - 0.955 - Mlig455_055911 {REF} {Length: 1239} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=82.7]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=121, Expect=6e-36]} {RNA1509_30114, RNA1509_59480} {RNA1310_21533.1, RNA1509_30114} {RNA1509_30114, RNA815_12036.1}
4. MligTC455_44019 9461 197.1 Mlig455_048415, Mlig455_049057

Neo: -

Age: logFC(26M/2M)=-0.256

 BANF1 0.953 - - - - 0.953 -

Mlig455_048415 {REF} {Length: 814} {TRANSSPLICED} {Pfam: Barrier to autointegration factor [PF02961.16, score=144.2]; IMS family HHH motif [PF11798.10, score=25.6]} {Human: ENSG00000175334, BANF1, barrier to autointegration factor 1, [RH, Score=134, Expect=4e-42]} {Mouse: ENSMUSG00000024844, Banf1, barrier to autointegration factor 1, [RH, Score=133, Expect=5e-42]} {Dmel: FBgn0031977, baf, barrier to autointegration factor, [RH, Score=124, Expect=1e-38]} {Celegans: WBGene00000235, baf-1, Barrier-to-autointegration factor 1, [Score=95.9, Expect=2e-27]} {Smed: dd_Smed_v6_3123_0_1, dd_Smed_v6_3123_0_1, [RH, Score=127, Expect=6e-40]} {RNA1509_3184} {RNA1310_42545, RNA1509_3184} {RNA1509_3184, RNA815_21487}

Mlig455_049057 {REF} {Length: 814} {TRANSSPLICED} {Pfam: Barrier to autointegration factor [PF02961.16, score=144.8]; IMS family HHH motif [PF11798.10, score=25.3]} {Human: ENSG00000175334, BANF1, barrier to autointegration factor 1, [RH, Score=131, Expect=3e-41]} {Mouse: ENSMUSG00000024844, Banf1, barrier to autointegration factor 1, [RH, Score=130, Expect=4e-41]} {Dmel: FBgn0031977, baf, barrier to autointegration factor, [RH, Score=124, Expect=1e-38]} {Celegans: WBGene00000235, baf-1, Barrier-to-autointegration factor 1, [Score=95.5, Expect=2e-27]} {Smed: dd_Smed_v6_3123_0_1, dd_Smed_v6_3123_0_1, [RH, Score=127, Expect=7e-40]} {RNA1509_20472, RNA1509_26701, RNA1509_34501} {RNA1310_42545, RNA1509_20472, RNA1509_26701, RNA1509_34501} {RNA1509_20472, RNA1509_26701, RNA1509_34501, RNA815_21487}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA