Data search


search
Exact
Search

Results for MligTC455_17883

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17883 1577 32.84 Mlig455_030780

Neo: -

Age: Down-Down-Up

Mlig455_030780 {REF} {Length: 3454} {RNA1509_36518, RNA1509_4490} {RNA1310_16003, RNA1509_36518} {RNA1509_36518, RNA815_8431}

Cumulative graph for MligTC455_17883

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.443 5.229 0.78246 1.00000
RegionR2 -1.63 5.229 0.04463 0.24835
RegionR3 -0.275 5.229 0.66515 1.00000
RegionR4 0.642 5.229 0.35297 0.67500
RegionR5 1.079 5.229 0.04522 0.17432
RegionR6 0.286 5.229 0.62961 1.00000
RegionR7 0.12 5.229 0.87064 1.00000
RegionR8 0.219 5.229 0.81324 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.5 5.229 0.14601 0.88623
RegenerationR2 0.869 5.229 0.23504 0.68258
RegenerationR3 1.249 5.229 0.09150 0.48827
RegenerationR4 1.612 5.229 0.02645 0.26135
RegenerationR5 0.957 5.229 0.16109 0.58482
RegenerationR6 1.958 5.229 0.00589 0.09301
RegenerationBL 1.574 5.229 0.01865 0.14680
RegenerationTP 1.576 5.229 0.03324 0.30463


Genes with expression patterns similar to MligTC455_17883

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17883 1577 32.84 Mlig455_030780

Neo: -

Age: Down-Down-Up

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_030780 {REF} {Length: 3454} {RNA1509_36518, RNA1509_4490} {RNA1310_16003, RNA1509_36518} {RNA1509_36518, RNA815_8431}
2. MligTC455_17884 2907 60.56 Mlig455_026874, Mlig455_030822, Mlig455_047795

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.586

3.686 - - 0.945 0.789 0.986 0.966

Mlig455_026874 {REF} {Length: 1653} {RNA1509_5435} {RNA1310_16003} {RNA815_8431}

Mlig455_030822 {REF} {Length: 1654} {RNA1509_5435} {RNA1310_16003} {RNA815_8431}

Mlig455_047795 {REF} {Length: 1601} {RNA1509_5435} {RNA1310_16003} {RNA815_8431}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA