TomoSeq data search

Data search

Results for MligTC455_18002

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18002

438

9.13

Mlig455_043095

Neo: -

Age: -

Mlig455_043095 {REF} {Length: 610} {RNA1509_14232} {RNA1310_41653.2} {RNA815_19936.2}

Cumulative graph for MligTC455_18002

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.783	3.576	0.60966	1.00000
RegionR2	1.768	3.576	0.00767	0.08517
RegionR3	0.293	3.576	0.61627	1.00000
RegionR4	0.092	3.576	0.90204	1.00000
RegionR5	-1.416	3.576	0.02790	0.12302
RegionR6	-0.189	3.576	0.76286	1.00000
RegionR7	-0.08	3.576	0.91632	1.00000
RegionR8	0.315	3.576	0.70379	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.484	3.576	0.19750	0.93684
RegenerationR2	-1.13	3.576	0.07012	0.43081
RegenerationR3	-1.381	3.576	0.04646	0.37584
RegenerationR4	-1.631	3.576	0.03026	0.28096
RegenerationR5	-1.191	3.576	0.12276	0.52403
RegenerationR6	-1.277	3.576	0.09331	0.37974
RegenerationBL	-1.92	3.576	0.03039	0.19451
RegenerationTP	0.506	3.576	0.50295	0.90242

Genes with expression patterns similar to MligTC455_18002

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18002	438	9.13	Mlig455_043095	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043095 {REF} {Length: 610} {RNA1509_14232} {RNA1310_41653.2} {RNA815_19936.2}
2.	MligTC455_53413	249	5.2	Mlig455_035022	Neo: - Age: - Region-specific R2: 4.451 Region-enriched R2: 3.023/0.00460	RP1	2.662	-	0.775	0.963	0.924	-	-	Mlig455_035022 {REF} {Length: 5065} {Pfam: PLAT/LH2 domain [PF01477.25, score=155.8]; Doublecortin [PF03607.19, score=103.5]; Embryo-specific protein 3, (ATS3) [PF06232.13, score=22.0]} {Human: ENSG00000104237, RP1, RP1, axonemal microtubule associated, [Score=473, Expect=5e-146]} {Mouse: ENSMUSG00000025900, Rp1, retinitis pigmentosa 1 (human), [Score=454, Expect=1e-136]} {Dmel: FBgn0261387, CG17528, [Score=56.6, Expect=1e-07]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=75.5, Expect=2e-13]} {Smed: dd_Smed_v6_10315_0_2, dd_Smed_v6_10315_0_2, [Score=698, Expect=0.0]} {RNA1509_57003} {RNA1310_2710} {RNA815_13802.1}
3.	MligTC455_45622	647	13.48	Mlig455_069391	Neo: - Age: - Region-specific R2: 5.132 Region-enriched R2: 3.915/0.00000 Regeneration-downregulated R2: -2.412 Regeneration-depleted R2: -2.412		2.654	-	0.816	0.953	0.885	-	-	Mlig455_069391 {REF} {Length: 971} {Smed: dd_Smed_v6_2575_0_1, dd_Smed_v6_2575_0_1, [Score=45.1, Expect=4e-07]} {RNA1509_31982} {RNA1310_46295} {RNA815_23543}
4.	MligTC455_46009	5464	113.82	Mlig455_061251, Mlig455_062639	Neo: - Age: logFC(26M/2M)=-0.276 Region-specific R2: 2.871 Region-enriched R2: 2.103/0.00001		2.632	0.792	-	0.890	0.950	-	-	Mlig455_061251 {REF} {Length: 1343} {Smed: dd_Smed_v6_1520_0_1, dd_Smed_v6_1520_0_1, [Score=54.7, Expect=6e-10]} {RNA1509_3086} {RNA1310_72677.2} {RNA815_25863} Mlig455_062639 {REF} {Length: 1176} {Smed: dd_Smed_v6_1520_0_1, dd_Smed_v6_1520_0_1, [Score=54.7, Expect=6e-10]} {RNA1509_3086} {RNA1310_72677.2} {RNA815_25863}
5.	MligTC455_20062	1135	23.64	Mlig455_033699	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.475	ECE1	2.558	-	0.844	0.969	0.745	-	-	Mlig455_033699 {REF} {Length: 3277} {Pfam: Peptidase family M13 [PF01431.23, score=186.8]; Peptidase family M13 [PF05649.15, score=163.0]} {Human: ENSG00000117298, ECE1, endothelin converting enzyme 1, [Score=348, Expect=6e-108]} {Mouse: ENSMUSG00000057530, Ece1, endothelin converting enzyme 1, [Score=357, Expect=3e-111]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=343, Expect=6e-106]} {Celegans: WBGene00013926, nep-1, Neprilysin-1, [Score=278, Expect=5e-82]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=295, Expect=4e-88]} {RNA1509_5752} {RNA1310_2497, RNA1509_5752} {RNA1509_5752, RNA815_2343}
6.	MligTC455_20063	1135	23.64	Mlig455_050130	Neo: - Age: Up-Up-Down, logFC(26M/2M)=2.293	ECE1	2.558	-	0.846	0.963	0.749	-	-	Mlig455_050130 {REF} {Length: 4828} {Pfam: Peptidase family M13 [PF01431.23, score=67.3]; Peptidase family M13 [PF05649.15, score=38.9]} {Human: ENSG00000117298, ECE1, endothelin converting enzyme 1, [Score=86.3, Expect=2e-16]; ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=85.9, Expect=2e-16]; ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=85.9, Expect=2e-16]} {Mouse: ENSMUSG00000057530, Ece1, endothelin converting enzyme 1, [Score=88.2, Expect=3e-17]} {Dmel: FBgn0029843, Nep1, Neprilysin 1, [Score=91.3, Expect=2e-18]} {Celegans: WBGene00017557, nep-11, Neprilysin-11, [Score=89.0, Expect=1e-17]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=83.2, Expect=5e-16]} {RNA1509_5752} {RNA1310_2497} {RNA815_2343}
7.	MligTC455_53109	2974	61.95	Mlig455_067651	Neo: - Age: - Region-specific R2: 3.788 Region-enriched R2: 2.545/0.00000 Region-enriched R8: 1.887/0.00132 Regeneration-downregulated BL: -3.378 Regeneration-depleted BL: -3.378		2.549	-	-	0.810	0.965	-	0.774	Mlig455_067651 {REF} {Length: 1328} {RNA1509_11451, RNA1509_20324, RNA1509_53964} {RNA1310_35335, RNA1509_11451, RNA1509_20324, RNA1509_53964} {RNA1509_11451, RNA1509_20324, RNA1509_53964, RNA815_16009.1}
8.	MligTC455_48218	1632	34	Mlig455_054782, Mlig455_054874	Neo: - Age: Down-Down-Up Region-specific R2: 3.792 Region-enriched R2: 2.673/0.00000 Regeneration-downregulated BL: -2.255 Regeneration-depleted BL: -2.255		1.83	-	-	0.852	0.978	-	-	Mlig455_054782 {REF} {Length: 1928} {RNA1509_16585} {RNA1310_35143} {RNA815_1375.1} Mlig455_054874 {REF} {Length: 2445} {RNA1509_16585} {RNA1310_35143, RNA1509_16585} {RNA1509_16585, RNA815_1375.1}
9.	MligTC455_41137	263	5.48	Mlig455_019407	Neo: - Age: - Region-enriched R2: 2.988/0.01472	GNG7	1.779	-	-	-	0.807	-	0.972	Mlig455_019407 {REF} {Length: 752} {Pfam: GGL domain [PF00631.24, score=51.3]} {Human: ENSG00000176533, GNG7, G protein subunit gamma 7, [Score=49.7, Expect=3e-09]} {Mouse: ENSMUSG00000036402, Gng12, guanine nucleotide binding protein (G protein), gamma 12, [Score=48.5, Expect=6e-09]; ENSMUSG00000032766, Gng11, guanine nucleotide binding protein (G protein), gamma 11, [Score=47.0, Expect=2e-08]} {Dmel: FBgn0263029, CG43324, [Score=52.8, Expect=8e-11]} {Celegans: WBGene00001681, gpc-1, Guanine nucleotide-binding protein subunit gamma, [Score=50.8, Expect=3e-10]} {Smed: dd_Smed_v6_1237_0_2, dd_Smed_v6_1237_0_2, [Score=100, Expect=4e-30]} {RNA1509_49315} {RNA1310_60760.1} {RNA815_37265}
10.	MligTC455_42270	1491	31.07	Mlig455_038876, Mlig455_055368, Mlig455_063840	Neo: - Age: - Region-enriched R2: 3.738/0.00095 Region-enriched R6: 2.982/0.00217		1.686	-	-	0.735	0.951	-	-	Mlig455_038876 {REF} {Length: 356} {RNA1509_31676} {RNA1310_69347} {RNA815_36089} Mlig455_055368 {REF} {Length: 574} {RNA1509_31676, RNA1509_43695} {RNA1310_69347, RNA1509_31676, RNA1509_43695} {RNA1509_31676, RNA1509_43695, RNA815_36089} Mlig455_063840 {REF} {Length: 568} {RNA1509_31676} {RNA1310_69347} {RNA815_36089}
11.	MligTC455_19329	90	1.88	Mlig455_068578	Neo: - Age: - Region-enriched R2: 3.988/0.02701	CHAT	1.665	-	-	-	0.962	0.703	-	Mlig455_068578 {REF} {Length: 3661} {TRANSSPLICED} {Pfam: Choline/Carnitine o-acyltransferase [PF00755.22, score=556.7]} {Human: ENSG00000070748, CHAT, choline O-acetyltransferase, [RH, Score=519, Expect=2e-177]} {Mouse: ENSMUSG00000021919, Chat, choline acetyltransferase, [RH, Score=520, Expect=7e-178]} {Dmel: FBgn0000303, ChAT, Choline acetyltransferase, [RH, Score=488, Expect=1e-164]} {Celegans: WBGene00000481, cha-1, Choline O-acetyltransferase, [RH, Score=363, Expect=2e-117]} {Smed: dd_Smed_v6_6208_0_1, dd_Smed_v6_6208_0_1, [RH, Score=601, Expect=0.0]} {RNA1509_36058} {RNA1310_3092, RNA1509_36058} {RNA1509_36058, RNA815_2435.1}
12.	MligTC455_27520	1983	41.32	Mlig455_050045, Mlig455_054023	Neo: - Age: logFC(26M/2M)=-0.596	ABCG2	0.962	-	-	-	-	-	0.962	Mlig455_050045 {REF} {Length: 2545} {Pfam: ABC-2 type transporter [PF01061.26, score=101.6]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=89.7, Expect=9e-19]} {Mouse: ENSMUSG00000032131, Abcg4, ATP binding cassette subfamily G member 4, [Score=87.4, Expect=4e-18]} {Dmel: FBgn0020445, E23, Early gene at 23, [Score=157, Expect=9e-42]} {Celegans: WBGene00015479, wht-1, ABC transporter ATP-binding protein/permease wht-1, [Score=78.2, Expect=2e-15]} {Smed: dd_Smed_v6_4142_0_1, dd_Smed_v6_4142_0_1, [Score=76.3, Expect=2e-15]} {RNA1509_2777} {RNA1310_8975.1} {RNA815_1994.2} Mlig455_054023 {REF} {Length: 3295} {Pfam: ABC transporter [PF00005.29, score=96.5]; ABC-2 type transporter [PF01061.26, score=79.8]; ABC-2 type transporter [PF19055.2, score=50.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=25.7]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=212, Expect=1e-60]} {Mouse: ENSMUSG00000029802, Abcg2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=212, Expect=5e-61]; ENSMUSG00000024254, Abcg8, ATP binding cassette subfamily G member 8, [Score=202, Expect=7e-57]} {Dmel: FBgn0020445, E23, Early gene at 23, [Score=333, Expect=4e-103]} {Celegans: WBGene00015479, wht-1, ABC transporter ATP-binding protein/permease wht-1, [Score=204, Expect=3e-58]} {Smed: dd_Smed_v6_8560_0_1, dd_Smed_v6_8560_0_1, [Score=196, Expect=7e-55]} {RNA1509_2777} {RNA1310_8975.1, RNA1509_2777} {RNA1509_2777, RNA815_1994.2}
13.	MligTC455_25183	587	12.22	Mlig455_005102	Neo: - Age: Down-Up-Down Region-enriched R8: 2.221/0.00519		0.957	-	-	-	-	-	0.957	Mlig455_005102 {REF} {Length: 3024} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=136.2]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=49.7, Expect=5e-06]} {Smed: dd_Smed_v6_20466_0_2, dd_Smed_v6_20466_0_2, [Score=84.3, Expect=5e-17]} {RNA1509_9013} {RNA1310_7298} {RNA815_2337}
14.	MligTC455_26873	68	1.42	Mlig455_027780	Neo: - Age: Up-Down-Down		0.952	-	-	-	-	-	0.952	Mlig455_027780 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=41.6]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=119, Expect=3e-28]} {RNA1509_39812} {RNA1310_27043.1} {RNA815_21476}
15.	MligTC455_24441	37	0.76	Mlig455_029687, Mlig455_034829	Neo: - Age: -		0.95	-	0.950	-	-	-	-	Mlig455_029687 {REF} {Length: 1968} {TRANSSPLICED} {RNA1310_30797} {RNA815_37394} Mlig455_034829 {REF} {Length: 2468} {RNA1310_30797} {RNA815_37606}

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