TomoSeq data search

Data search

Results for MligTC455_18022

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_18022	84	1.74	Mlig455_008855	Neo: - Age: -		Mlig455_008855 {REF} {Length: 687} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_60503} {RNA815_39433}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_18022

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	3.008	1.529	0.99973	1.00000
RegionR2	-2.434	1.529	0.98777	1.00000
RegionR3	-4.956	1.529	0.99959	1.00000
RegionR4	2.868	1.529	0.08529	0.27653
RegionR5	-0.612	1.529	0.81767	1.00000
RegionR6	-0.91	1.529	0.89530	1.00000
RegionR7	3.571	1.529	0.01268	0.19878
RegionR8	-0.535	1.529	0.85721	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.801	1.529	0.99985	1.00000
RegenerationR2	1.314	1.529	0.16209	0.59953
RegenerationR3	3.413	1.529	0.06709	0.43617
RegenerationR4	-0.589	1.529	0.63917	0.92718
RegenerationR5	0.71	1.529	0.66058	0.93644
RegenerationR6	0.435	1.529	0.79629	0.97518
RegenerationBL	-4.638	1.529	0.08825	0.34813
RegenerationTP	-3.243	1.529	0.08992	0.47189

Genes with expression patterns similar to MligTC455_18022

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18022	84	1.74	Mlig455_008855	Neo: - Age: -		4	1.000	-	-	1.000	1.000	1.000	Mlig455_008855 {REF} {Length: 687} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_60503} {RNA815_39433}
2.	MligTC455_47324	117	2.44	Mlig455_035806	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.510	KCNC1	0.969	-	-	-	0.969	-	-	Mlig455_035806 {REF} {Length: 3022} {Pfam: Ion transport protein [PF00520.33, score=152.0]; BTB/POZ domain [PF02214.24, score=100.3]; Ion channel [PF07885.18, score=44.8]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=427, Expect=7e-142]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=426, Expect=2e-141]; ENSG00000131398, KCNC3, potassium voltage-gated channel subfamily C member 3, [RH, Score=406, Expect=2e-131]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=406, Expect=4e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=428, Expect=3e-142]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=412, Expect=7e-134]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=6e-135]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=712, Expect=0.0]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [RH, Score=598, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=681, Expect=0.0]} {RNA1509_44896} {RNA1310_19148} {RNA815_2283.1}
3.	MligTC455_42116	31	0.65	Mlig455_067292, Mlig455_069005	Neo: - Age: Down-Up-Down		0.95	-	-	-	-	-	0.950	Mlig455_067292 {REF} {Length: 1857} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=90.0]} {Dmel: FBgn0032506, CG9395, [Score=86.3, Expect=1e-17]} {Celegans: WBGene00008763, F13G3.3, Glycosyltransferase family 92 protein F13G3.3, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=206, Expect=1e-61]} {RNA1310_14481.1} {RNA815_5740.1} Mlig455_069005 {REF} {Length: 1925} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=83.9]} {Dmel: FBgn0032506, CG9395, [Score=84.0, Expect=9e-17]} {Celegans: WBGene00008763, F13G3.3, Glycosyltransferase family 92 protein F13G3.3, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=201, Expect=4e-59]} {RNA1310_14481.1} {RNA815_5740.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_18022

1.74

Mlig455_008855

Neo: -

Age: -

1.000

Mlig455_008855 {REF} {Length: 687} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_60503} {RNA815_39433}

MligTC455_47324

117

2.44

Mlig455_035806

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.510

KCNC1

0.969

Mlig455_035806 {REF} {Length: 3022} {Pfam: Ion transport protein [PF00520.33, score=152.0]; BTB/POZ domain [PF02214.24, score=100.3]; Ion channel [PF07885.18, score=44.8]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=427, Expect=7e-142]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=426, Expect=2e-141]; ENSG00000131398, KCNC3, potassium voltage-gated channel subfamily C member 3, [RH, Score=406, Expect=2e-131]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=406, Expect=4e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=428, Expect=3e-142]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=412, Expect=7e-134]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=6e-135]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=712, Expect=0.0]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [RH, Score=598, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=681, Expect=0.0]} {RNA1509_44896} {RNA1310_19148} {RNA815_2283.1}

MligTC455_42116

0.65

Mlig455_067292, Mlig455_069005

Neo: -

Age: Down-Up-Down

0.95

0.950

Mlig455_067292 {REF} {Length: 1857} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=90.0]} {Dmel: FBgn0032506, CG9395, [Score=86.3, Expect=1e-17]} {Celegans: WBGene00008763, F13G3.3, Glycosyltransferase family 92 protein F13G3.3, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=206, Expect=1e-61]} {RNA1310_14481.1} {RNA815_5740.1}

Mlig455_069005 {REF} {Length: 1925} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=83.9]} {Dmel: FBgn0032506, CG9395, [Score=84.0, Expect=9e-17]} {Celegans: WBGene00008763, F13G3.3, Glycosyltransferase family 92 protein F13G3.3, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=201, Expect=4e-59]} {RNA1310_14481.1} {RNA815_5740.1}