Data search
Results for MligTC455_18025
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18025 | 296 | 6.16 | Mlig455_032610 | Neo: - Age: - |
THRA | Mlig455_032610 {REF} {Length: 3626} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=77.7]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=42.7]} {Human: ENSG00000126351, THRA, thyroid hormone receptor alpha, [Score=144, Expect=3e-37]; ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=144, Expect=4e-37]; ENSG00000151090, THRB, thyroid hormone receptor beta, [Score=141, Expect=6e-36]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=137, Expect=2e-35]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=143, Expect=2e-37]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=142, Expect=1e-36]; ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=139, Expect=2e-35]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=132, Expect=2e-32]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [RH, Score=137, Expect=3e-34]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=107, Expect=9e-25]} {RNA1509_14964} {RNA1310_14848, RNA1509_14964} {RNA1509_14964, RNA815_9493} |
Cumulative graph for MligTC455_18025
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.704 | 3.098 | 0.10143 | 0.67128 | |
| RegionR2 | 0.167 | 3.098 | 0.77731 | 1.00000 | |
| RegionR3 | 0.827 | 3.098 | 0.04252 | 0.35970 | |
| RegionR4 | -1.044 | 3.098 | 0.09234 | 0.29148 | |
| RegionR5 | 0.101 | 3.098 | 0.80713 | 1.00000 | |
| RegionR6 | 0.572 | 3.098 | 0.19644 | 0.76523 | |
| RegionR7 | 1.136 | 3.098 | 0.03414 | 0.35164 | |
| RegionR8 | 0.946 | 3.098 | 0.17289 | 0.74973 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.218 | 3.098 | 0.61849 | 1.00000 | |
| RegenerationR2 | 0.051 | 3.098 | 0.91787 | 1.00000 | |
| RegenerationR3 | -0.37 | 3.098 | 0.42551 | 0.81857 | |
| RegenerationR4 | -0.474 | 3.098 | 0.36038 | 0.78734 | |
| RegenerationR5 | -0.469 | 3.098 | 0.26890 | 0.70031 | |
| RegenerationR6 | -1.4 | 3.098 | 0.01324 | 0.14203 | |
| RegenerationBL | -2.078 | 3.098 | 0.01858 | 0.14649 | |
| RegenerationTP | -1.026 | 3.098 | 0.14070 | 0.55932 |
Genes with expression patterns similar to MligTC455_18025
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18025 | 296 | 6.16 | Mlig455_032610 | Neo: - Age: - |
THRA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_032610 {REF} {Length: 3626} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=77.7]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=42.7]} {Human: ENSG00000126351, THRA, thyroid hormone receptor alpha, [Score=144, Expect=3e-37]; ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=144, Expect=4e-37]; ENSG00000151090, THRB, thyroid hormone receptor beta, [Score=141, Expect=6e-36]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=137, Expect=2e-35]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=143, Expect=2e-37]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=142, Expect=1e-36]; ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=139, Expect=2e-35]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=132, Expect=2e-32]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [RH, Score=137, Expect=3e-34]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=107, Expect=9e-25]} {RNA1509_14964} {RNA1310_14848, RNA1509_14964} {RNA1509_14964, RNA815_9493} |
| 2. | MligTC455_18026 | 260 | 5.42 | Mlig455_070375 | Neo: - Age: - |
5.254 | 0.988 | 0.986 | 0.891 | 0.769 | 0.848 | 0.772 | Mlig455_070375 {REF} {Length: 1446} {NoTransDecoderORF} {RNA1509_32985, RNA1509_36488} {RNA1310_41729, RNA1509_32985} {RNA1509_32985, RNA815_35413} | |
| 3. | MligTC455_25246 | 415 | 8.65 | Mlig455_001858 | Neo: - Age: - Region-enriched R4: 2.087/0.00186 |
WDR13 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_001858 {REF} {Length: 2845} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=51.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=23.3]} {Human: ENSG00000101940, WDR13, WD repeat domain 13, [Score=241, Expect=7e-74]} {Mouse: ENSMUSG00000031166, Wdr13, WD repeat domain 13, [Score=244, Expect=1e-76]} {Dmel: FBgn0040066, wds, will die slowly, [Score=48.9, Expect=6e-06]} {Smed: dd_Smed_v6_5274_0_1, dd_Smed_v6_5274_0_1, [Score=209, Expect=3e-62]} {RNA1509_24779} {RNA1310_8171, RNA1509_24779} {RNA1509_24779, RNA815_6195} |
| 4. | MligTC455_44561 | 1920 | 40 | Mlig455_057194 | Neo: - Age: logFC(26M/2M)=0.185 |
NBR1 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_057194 {REF} {Length: 3269} {Pfam: Zinc finger, ZZ type [PF00569.19, score=41.7]; UBA/TS-N domain [PF00627.33, score=19.6]} {Human: ENSG00000188554, NBR1, NBR1, autophagy cargo receptor, [RH, Score=60.5, Expect=1e-08]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [Score=64.7, Expect=2e-10]} {Dmel: FBgn0003231, ref(2)P, refractory to sigma P, [Score=55.5, Expect=1e-07]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [RH, Score=62.8, Expect=6e-10]} {Smed: dd_Smed_v6_2812_0_1, dd_Smed_v6_2812_0_1, [RH, Score=54.7, Expect=7e-08]} {RNA1509_10260, RNA1509_33571} {RNA1310_6559, RNA1509_10260, RNA1509_33571} {RNA1509_10260, RNA1509_33571, RNA815_1176} |
| 5. | MligTC455_37981 | 573 | 11.94 | Mlig455_049381 | Neo: - Age: - |
GTPBP1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_049381 {REF} {Length: 4340} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=79.5]; Elongation factor Tu domain 2 [PF03144.27, score=26.6]; Elongation factor Tu C-terminal domain [PF03143.19, score=19.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.4]} {Human: ENSG00000100226, GTPBP1, GTP binding protein 1, [RH, Score=727, Expect=0.0]} {Mouse: ENSMUSG00000042535, Gtpbp1, GTP binding protein 1, [RH, Score=728, Expect=0.0]} {Dmel: FBgn0027836, Dgp-1, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00000480, cgp-1, GTP-binding protein cgp-1, [RH, Score=577, Expect=0.0]} {Smed: dd_Smed_v6_2780_0_1, dd_Smed_v6_2780_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_20206, RNA1509_4913} {RNA1310_5452.1, RNA1509_20206, RNA1509_4913} {RNA1509_20206, RNA1509_4913, RNA815_2929} |
| 6. | MligTC455_36534 | 927 | 19.3 | Mlig455_027552 | Neo: - Age: - |
DCTN2 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_027552 {REF} {Length: 5008} {Pfam: Dynamitin [PF04912.16, score=296.1]} {Human: ENSG00000175203, DCTN2, dynactin subunit 2, [RH, Score=221, Expect=6e-68]} {Mouse: ENSMUSG00000025410, Dctn2, dynactin 2, [RH, Score=231, Expect=1e-71]} {Dmel: FBgn0021825, DCTN2-p50, Dynactin 2, p50 subunit, [RH, Score=139, Expect=4e-37]} {Celegans: WBGene00001018, dnc-2, Probable dynactin subunit 2, [RH, Score=67.4, Expect=3e-12]} {Smed: dd_Smed_v6_3787_0_5, dd_Smed_v6_3787_0_5, [RH, Score=152, Expect=7e-42]} {RNA1509_11264, RNA1509_24643, RNA1509_39970, RNA1509_40361, RNA1509_52084, RNA1509_52932, RNA1509_54583} {RNA1310_18975, RNA1509_11264, RNA1509_24643, RNA1509_39970, RNA1509_40361, RNA1509_52084, RNA1509_52932, RNA1509_54583} {RNA1509_11264, RNA1509_24643, RNA1509_39970, RNA1509_40361, RNA1509_52084, RNA1509_52932, RNA1509_54583, RNA815_426} |
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