TomoSeq data search

Data search

Results for MligTC455_18039

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_18039	194	4.05	Mlig455_067226	Neo: - Age: -		Mlig455_067226 {REF} {Length: 1031} {NoTransDecoderORF} {RNA1509_37916} {RNA1310_32119.1} {RNA815_34017}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_18039

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.808	2.579	1.00000	1.00000
RegionR2	1.64	2.579	0.14406	0.47267
RegionR3	0.835	2.579	0.43955	0.95608
RegionR4	1.432	2.579	0.20084	0.48063
RegionR5	1.257	2.579	0.22481	0.52862
RegionR6	1.569	2.579	0.13752	0.66634
RegionR7	1.083	2.579	0.42106	1.00000
RegionR8	-4.007	2.579	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.18	2.579	0.15359	0.89609
RegenerationR2	0.556	2.579	0.24773	0.69488
RegenerationR3	1.16	2.579	0.07693	0.45953
RegenerationR4	0.962	2.579	0.11852	0.52416
RegenerationR5	0.684	2.579	0.21792	0.65261
RegenerationR6	0.784	2.579	0.19726	0.53747
RegenerationBL	2.318	2.579	0.07703	0.32395
RegenerationTP	2.377	2.579	0.23248	0.67782

Genes with expression patterns similar to MligTC455_18039

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18039	194	4.05	Mlig455_067226	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_067226 {REF} {Length: 1031} {NoTransDecoderORF} {RNA1509_37916} {RNA1310_32119.1} {RNA815_34017}
2.	MligTC455_30121	227	4.74	Mlig455_049656	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-2.514	ZBED1	0.959	-	-	-	0.959	-	-	Mlig455_049656 {REF} {Length: 5385} {TRANSSPLICED} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=44.1]; BED zinc finger [PF02892.17, score=30.7]} {Human: ENSG00000214717, ZBED1, zinc finger BED-type containing 1, [Score=89.0, Expect=1e-17]} {Mouse: ENSMUSG00000094410, Gm38394, predicted gene, 38394, [Score=59.3, Expect=1e-08]; ENSMUSG00000102049, Zbed6, zinc finger, BED type containing 6, [Score=59.3, Expect=1e-08]} {Smed: dd_Smed_v6_18427_0_1, dd_Smed_v6_18427_0_1, [Score=49.7, Expect=4e-06]} {RNA1509_6537} {RNA1310_5792, RNA1509_6537} {RNA1509_6537, RNA815_1502}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_18039

194

4.05

Mlig455_067226

Neo: -

Age: -

1.000

Mlig455_067226 {REF} {Length: 1031} {NoTransDecoderORF} {RNA1509_37916} {RNA1310_32119.1} {RNA815_34017}

MligTC455_30121

227

4.74

Mlig455_049656

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.514

ZBED1

0.959

Mlig455_049656 {REF} {Length: 5385} {TRANSSPLICED} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=44.1]; BED zinc finger [PF02892.17, score=30.7]} {Human: ENSG00000214717, ZBED1, zinc finger BED-type containing 1, [Score=89.0, Expect=1e-17]} {Mouse: ENSMUSG00000094410, Gm38394, predicted gene, 38394, [Score=59.3, Expect=1e-08]; ENSMUSG00000102049, Zbed6, zinc finger, BED type containing 6, [Score=59.3, Expect=1e-08]} {Smed: dd_Smed_v6_18427_0_1, dd_Smed_v6_18427_0_1, [Score=49.7, Expect=4e-06]} {RNA1509_6537} {RNA1310_5792, RNA1509_6537} {RNA1509_6537, RNA815_1502}