Data search
Results for MligTC455_18073
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18073 | 439 | 9.15 | Mlig455_046173 | Neo: - Age: - |
Mlig455_046173 {REF} {Length: 1866} {TRANSSPLICED} {RNA1509_22768} {RNA1310_17746, RNA1509_22768} {RNA1509_22768, RNA815_13944} |
Cumulative graph for MligTC455_18073
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.584 | 3.56 | 0.25644 | 0.90480 | |
| RegionR2 | 0.581 | 3.56 | 0.31730 | 0.70804 | |
| RegionR3 | 0.322 | 3.56 | 0.49766 | 0.99367 | |
| RegionR4 | -0.535 | 3.56 | 0.32661 | 0.64458 | |
| RegionR5 | 0.557 | 3.56 | 0.20019 | 0.49064 | |
| RegionR6 | 0.305 | 3.56 | 0.52714 | 1.00000 | |
| RegionR7 | 0.464 | 3.56 | 0.42457 | 1.00000 | |
| RegionR8 | -0.11 | 3.56 | 0.89497 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.142 | 3.56 | 0.94792 | 1.00000 | |
| RegenerationR2 | -0.62 | 3.56 | 0.19771 | 0.64255 | |
| RegenerationR3 | -0.715 | 3.56 | 0.17754 | 0.61317 | |
| RegenerationR4 | -0.851 | 3.56 | 0.11227 | 0.51389 | |
| RegenerationR5 | -0.892 | 3.56 | 0.06984 | 0.41500 | |
| RegenerationR6 | -1.13 | 3.56 | 0.04246 | 0.25698 | |
| RegenerationBL | -1.872 | 3.56 | 0.01541 | 0.13101 | |
| RegenerationTP | 0.134 | 3.56 | 0.83934 | 1.00000 |
Genes with expression patterns similar to MligTC455_18073
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18073 | 439 | 9.15 | Mlig455_046173 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046173 {REF} {Length: 1866} {TRANSSPLICED} {RNA1509_22768} {RNA1310_17746, RNA1509_22768} {RNA1509_22768, RNA815_13944} | |
| 2. | MligTC455_25753 | 134 | 2.8 | Mlig455_040394 | Neo: - Age: Up-Down-Up Region-enriched R4: 2.927/0.00231 |
1.803 | 0.838 | - | - | - | 0.965 | - | Mlig455_040394 {REF} {Length: 5965} {RNA1509_5734} {RNA1310_64234} {RNA815_32443} | |
| 3. | MligTC455_38703 | 665 | 13.85 | Mlig455_058591 | Neo: Int S/G2/M Age: - |
KLHL3 | 1.759 | - | - | 0.784 | - | 0.975 | - | Mlig455_058591 {REF} {Length: 6004} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=251.0]; Conserved hypothetical ATP binding protein [PF03029.19, score=199.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=140.0]; Kelch motif [PF13964.8, score=123.6]; BTB/POZ domain [PF00651.33, score=105.0]; BTB And C-terminal Kelch [PF07707.17, score=103.6]; Kelch motif [PF07646.17, score=69.9]; Galactose oxidase, central domain [PF13418.8, score=67.5]; Galactose oxidase, central domain [PF13415.8, score=62.0]; AAA domain (Cdc48 subfamily) [PF07724.16, score=24.7]; AAA+ lid domain [PF17862.3, score=22.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=22.6]; Protein of unknown function (DUF815) [PF05673.15, score=22.3]; AAA domain [PF13401.8, score=21.1]; AAA domain [PF13238.8, score=21.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.4]; Ferrous iron transport protein B [PF02421.20, score=18.9]} {Human: ENSG00000146021, KLHL3, kelch like family member 3, [RH, Score=724, Expect=0.0]; ENSG00000109466, KLHL2, kelch like family member 2, [RH, Score=703, Expect=0.0]} {Mouse: ENSMUSG00000014164, Klhl3, kelch-like 3, [RH, Score=719, Expect=0.0]; ENSMUSG00000031605, Klhl2, kelch-like 2, Mayven, [RH, Score=706, Expect=0.0]} {Dmel: FBgn0001301, kel, kelch, [RH, Score=682, Expect=0.0]} {Celegans: WBGene00004502, rpt-2, Probable 26S protease regulatory subunit 4, [Score=460, Expect=3e-151]} {Smed: dd_Smed_v6_5640_0_1, dd_Smed_v6_5640_0_1, [RH, Score=703, Expect=0.0]} {RNA1509_28789} {RNA1310_10869} {RNA815_1277.1} |
| 4. | MligTC455_50229 | 176 | 3.66 | Mlig455_010733 | Neo: - Age: - |
TAB1 | 1.747 | 0.792 | - | - | - | 0.955 | - | Mlig455_010733 {REF} {Length: 3464} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=20.5]} {Human: ENSG00000100324, TAB1, TGF-beta activated kinase 1 (MAP3K7) binding protein 1, [RH, Score=50.8, Expect=3e-06]} {Mouse: ENSMUSG00000022414, Tab1, TGF-beta activated kinase 1/MAP3K7 binding protein 1, [RH, Score=51.2, Expect=2e-06]} {RNA1509_20706} {RNA1310_18794, RNA1509_20706} {RNA1509_20706, RNA815_17460} |
| 5. | MligTC455_27642 | 279 | 5.82 | Mlig455_006426 | Neo: - Age: - Region-enriched R4: 1.960/0.00696 |
NOTCH1 | 1.721 | - | - | 0.765 | - | 0.956 | - | Mlig455_006426 {REF} {Length: 4913} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=151.4]; Human growth factor-like EGF [PF12661.9, score=74.2]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=290, Expect=1e-81]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=295, Expect=3e-83]} {Dmel: FBgn0259685, crb, crumbs, [Score=256, Expect=2e-70]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=214, Expect=8e-57]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=220, Expect=5e-59]} {RNA1509_33949, RNA1509_39530, RNA1509_42581, RNA1509_43325} {RNA1310_10126, RNA1509_39530, RNA1509_42581, RNA1509_43325} {RNA1509_39530, RNA1509_42581, RNA1509_43325, RNA815_693.1} |
| 6. | MligTC455_29034 | 114 | 2.38 | Mlig455_046018, Mlig455_049535 | Neo: - Age: - |
0.97 | - | - | - | - | 0.970 | - | Mlig455_046018 {REF} {Length: 1348} {NoTransDecoderORF} {RNA1509_34915} {RNA1310_8956.1} {RNA815_20736.1} Mlig455_049535 {REF} {Length: 1831} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_8956.2} {RNA815_41033.2} |
|
| 7. | MligTC455_23369 | 566 | 11.79 | Mlig455_065621 | Neo: - Age: Up-Down-Up Region-enriched R2: 2.701/0.03747 |
HYDIN | 0.969 | - | - | - | - | 0.969 | - | Mlig455_065621 {REF} {Length: 7684} {Pfam: Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=100.7]; Transmembrane protein 131-like N-terminal [PF12371.10, score=42.4]; Protein of unknown function (DUF1573) [PF07610.13, score=39.4]; MYCBP-associated protein family [PF14646.8, score=33.6]; MSP (Major sperm protein) domain [PF00635.28, score=22.6]} {Human: ENSG00000283022, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=1239, Expect=0.0]; ENSG00000157423, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=1239, Expect=0.0]} {Mouse: ENSMUSG00000059854, Hydin, HYDIN, axonemal central pair apparatus protein, [Score=1286, Expect=0.0]} {Smed: dd_Smed_v6_7302_1_1, dd_Smed_v6_7302_1_1, [Score=1395, Expect=0.0]} {RNA1509_30047} {RNA1310_26.1} {RNA815_225} |
| 8. | MligTC455_46481 | 1143 | 23.81 | Mlig455_030245 | Neo: - Age: logFC(26M/2M)=-0.408 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_030245 {REF} {Length: 1621} {RNA1509_6872} {RNA1310_19869.1} {RNA815_8634} | |
| 9. | MligTC455_13385 | 15 | 0.32 | Mlig455_006770 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_006770 {REF} {Length: 992} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23159} {RNA1310_52669} {RNA815_16870} | |
| 10. | MligTC455_23401 | 141 | 2.95 | Mlig455_039422 | Neo: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_039422 {REF} {Length: 1877} {RNA1310_34186.1} {RNA815_33563} | |
| 11. | MligTC455_30000 | 1520 | 31.66 | Mlig455_006409 | Neo: - Age: Down-Down-Up |
NOTCH1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_006409 {REF} {Length: 2677} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=198.7]; Human growth factor-like EGF [PF12661.9, score=99.3]; EGF-like domain [PF07974.15, score=23.3]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=306, Expect=2e-87]; ENSG00000134250, NOTCH2, notch 2, [Score=305, Expect=5e-87]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=312, Expect=1e-89]; ENSMUSG00000027878, Notch2, notch 2, [Score=300, Expect=9e-86]} {Dmel: FBgn0259685, crb, crumbs, [Score=291, Expect=1e-82]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=234, Expect=5e-64]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=236, Expect=9e-65]} {RNA1509_26892} {RNA1310_37026} {RNA815_11987.1} |
| 12. | MligTC455_29082 | 203 | 4.24 | Mlig455_062753 | Neo: - Age: logFC(26M/2M)=-0.658 Region-enriched R2: 3.564/0.00708 |
VWA3B | 0.954 | - | - | - | - | 0.954 | - | Mlig455_062753 {REF} {Length: 4345} {TRANSSPLICED} {Pfam: von Willebrand factor type A domain [PF13768.8, score=82.4]; von Willebrand factor type A domain [PF00092.30, score=42.0]; von Willebrand factor type A domain [PF13519.8, score=31.6]} {Human: ENSG00000168658, VWA3B, von Willebrand factor A domain containing 3B, [RH, Score=604, Expect=0.0]} {Mouse: ENSMUSG00000050122, Vwa3b, von Willebrand factor A domain containing 3B, [RH, Score=444, Expect=2e-140]} {Smed: dd_Smed_v6_9363_0_2, dd_Smed_v6_9363_0_2, [RH, Score=920, Expect=0.0]} {RNA1509_3581} {RNA1310_1567} {RNA815_329.1} |
| 13. | MligTC455_31899 | 54 | 1.12 | Mlig455_038388 | Neo: - Age: logFC(26M/2M)=-0.361 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_038388 {REF} {Length: 5705} {Mouse: ENSMUSG00000034156, Tspoap1, TSPO associated protein 1, [Score=57.4, Expect=5e-08]} {Smed: dd_Smed_v6_9824_0_1, dd_Smed_v6_9824_0_1, [Score=60.5, Expect=2e-09]} {RNA1509_50962} {RNA1310_2550.1} {RNA815_706} |
Berezikov Lab - 2020-2021 © ERIBA