Data search


search
Exact
Search

Results for MligTC455_18092

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18092 35 0.72 Mlig455_014741

Neo: -

Age: -

ARL3 Mlig455_014741 {REF} {Length: 1753} {Pfam: ADP-ribosylation factor family [PF00025.23, score=67.3]; 50S ribosome-binding GTPase [PF01926.25, score=26.6]; G-protein alpha subunit [PF00503.22, score=19.1]} {Human: ENSG00000138175, ARL3, ADP ribosylation factor like GTPase 3, [Score=67.8, Expect=2e-13]; ENSG00000122644, ARL4A, ADP ribosylation factor like GTPase 4A, [Score=67.8, Expect=3e-13]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=65.1, Expect=2e-12]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=65.1, Expect=2e-12]; ENSG00000188042, ARL4C, ADP ribosylation factor like GTPase 4C, [Score=64.7, Expect=4e-12]} {Mouse: ENSMUSG00000047446, Arl4a, ADP-ribosylation factor-like 4A, [Score=67.4, Expect=2e-13]; ENSMUSG00000025035, Arl3, ADP-ribosylation factor-like 3, [Score=66.6, Expect=4e-13]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=65.1, Expect=1e-12]; ENSMUSG00000049866, Arl4c, ADP-ribosylation factor-like 4C, [Score=64.3, Expect=3e-12]} {Dmel: FBgn0013749, Arf102F, ADP ribosylation factor at 102F, [Score=66.6, Expect=3e-13]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [Score=65.5, Expect=5e-13]} {Smed: dd_Smed_v6_2013_0_1, dd_Smed_v6_2013_0_1, [Score=78.6, Expect=7e-18]} {RNA1310_41790} {RNA815_35492}

Cumulative graph for MligTC455_18092

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.333 1.007 0.99969 1.00000
RegionR2 3.368 1.007 0.19801 0.55716
RegionR3 1.183 1.007 0.55171 1.00000
RegionR4 -0.337 1.007 0.99972 1.00000
RegionR5 0.347 1.007 0.99975 1.00000
RegionR6 -1.013 1.007 0.99987 1.00000
RegionR7 2.603 1.007 0.06852 0.50382
RegionR8 -2.817 1.007 0.99987 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.56 1.007 0.99998 1.00000
RegenerationR2 -0.767 1.007 0.14133 0.57128
RegenerationR3 0.345 1.007 0.41379 0.81117
RegenerationR4 1.318 1.007 0.16609 0.60108
RegenerationR5 0.084 1.007 0.43392 0.82070
RegenerationR6 2.887 1.007 0.09880 0.39055
RegenerationBL 3.512 1.007 0.10444 0.38162
RegenerationTP -2.144 1.007 0.99989 1.00000


Genes with expression patterns similar to MligTC455_18092

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18092 35 0.72 Mlig455_014741

Neo: -

Age: -

ARL3 3 - - 1.000 1.000 1.000 - Mlig455_014741 {REF} {Length: 1753} {Pfam: ADP-ribosylation factor family [PF00025.23, score=67.3]; 50S ribosome-binding GTPase [PF01926.25, score=26.6]; G-protein alpha subunit [PF00503.22, score=19.1]} {Human: ENSG00000138175, ARL3, ADP ribosylation factor like GTPase 3, [Score=67.8, Expect=2e-13]; ENSG00000122644, ARL4A, ADP ribosylation factor like GTPase 4A, [Score=67.8, Expect=3e-13]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSG00000168374, ARF4, ADP ribosylation factor 4, [Score=65.1, Expect=2e-12]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=65.1, Expect=2e-12]; ENSG00000188042, ARL4C, ADP ribosylation factor like GTPase 4C, [Score=64.7, Expect=4e-12]} {Mouse: ENSMUSG00000047446, Arl4a, ADP-ribosylation factor-like 4A, [Score=67.4, Expect=2e-13]; ENSMUSG00000025035, Arl3, ADP-ribosylation factor-like 3, [Score=66.6, Expect=4e-13]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=65.5, Expect=1e-12]; ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=65.1, Expect=1e-12]; ENSMUSG00000049866, Arl4c, ADP-ribosylation factor-like 4C, [Score=64.3, Expect=3e-12]} {Dmel: FBgn0013749, Arf102F, ADP ribosylation factor at 102F, [Score=66.6, Expect=3e-13]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [Score=65.5, Expect=5e-13]} {Smed: dd_Smed_v6_2013_0_1, dd_Smed_v6_2013_0_1, [Score=78.6, Expect=7e-18]} {RNA1310_41790} {RNA815_35492}
2. MligTC455_28294 127 2.64 Mlig455_006642

Neo: -

Age: Up-Down-Up

ANKRD17 1.747 - - 0.787 0.960 - - Mlig455_006642 {REF} {Length: 7026} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=380.4]; Ankyrin repeats (many copies) [PF13637.8, score=222.9]; Ankyrin repeat [PF13606.8, score=165.6]; Ankyrin repeats (many copies) [PF13857.8, score=142.3]; Ankyrin repeat [PF00023.32, score=136.2]; Nucleotide-Binding Domain 94 of RH [PF16830.7, score=23.4]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=139, Expect=7e-32]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=139, Expect=3e-32]} {Dmel: FBgn0039590, CG10011, [Score=90.5, Expect=1e-17]} {Celegans: WBGene00012124, T28D6.4, [Score=84.7, Expect=5e-16]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=106, Expect=9e-23]} {RNA1509_44391} {RNA1310_30754} {RNA815_10474.1}
3. MligTC455_46630 151 3.14 Mlig455_043720, Mlig455_043807

Neo: -

Age: -

GFI1 0.978 - - - - 0.978 -

Mlig455_043720 {REF} {Length: 2286} {Pfam: Zinc-finger double domain [PF13465.8, score=90.3]; Zinc finger, C2H2 type [PF00096.28, score=79.3]; C2H2-type zinc finger [PF13894.8, score=60.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=40.0]; C2H2-type zinc finger [PF13912.8, score=32.2]; BED zinc finger [PF02892.17, score=20.8]; Zinc-finger of C2H2 type [PF12874.9, score=18.9]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [RH, Score=297, Expect=1e-96]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [RH, Score=295, Expect=7e-97]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [RH, Score=300, Expect=8e-97]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [RH, Score=295, Expect=5e-97]} {Dmel: FBgn0051632, sens-2, senseless-2, [RH, Score=299, Expect=7e-94]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [RH, Score=235, Expect=5e-74]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [RH, Score=273, Expect=9e-89]} {RNA1509_50869} {RNA1310_44177} {RNA815_39346}

Mlig455_043807 {REF} {Length: 2285} {Pfam: Zinc-finger double domain [PF13465.8, score=84.1]; Zinc finger, C2H2 type [PF00096.28, score=79.3]; C2H2-type zinc finger [PF13894.8, score=60.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=40.0]; C2H2-type zinc finger [PF13912.8, score=32.0]; BED zinc finger [PF02892.17, score=20.3]; Zinc-finger of C2H2 type [PF12874.9, score=18.9]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [RH, Score=297, Expect=1e-96]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [RH, Score=295, Expect=8e-97]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [RH, Score=299, Expect=9e-97]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [RH, Score=294, Expect=6e-97]} {Dmel: FBgn0051632, sens-2, senseless-2, [RH, Score=296, Expect=5e-93]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [RH, Score=235, Expect=6e-74]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [RH, Score=270, Expect=3e-87]} {RNA1509_50869} {RNA1310_44177} {RNA815_39346}
4. MligTC455_21453 47 0.99 Mlig455_064912, Mlig455_066844

Neo: -

Age: -

NPY1R 0.964 - - - - 0.964 -

Mlig455_064912 {REF} {Length: 3906} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=115.8]} {Human: ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=102, Expect=3e-23]; ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=97.8, Expect=2e-21]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=104, Expect=5e-24]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=102, Expect=3e-23]; ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=100, Expect=1e-22]; ENSMUSG00000031212, Pgr15l, G protein-coupled receptor 15-like, [Score=100, Expect=3e-22]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=154, Expect=2e-41]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=115, Expect=5e-28]} {Smed: dd_Smed_v6_16725_0_1, dd_Smed_v6_16725_0_1, [Score=207, Expect=2e-61]} {RNA1310_60376} {RNA815_27641}

Mlig455_066844 {REF} {Length: 3847} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=115.8]} {Human: ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=102, Expect=3e-23]; ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=97.8, Expect=2e-21]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=104, Expect=5e-24]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=102, Expect=3e-23]; ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=100, Expect=1e-22]; ENSMUSG00000031212, Pgr15l, G protein-coupled receptor 15-like, [Score=100, Expect=3e-22]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=154, Expect=2e-41]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=115, Expect=5e-28]} {Smed: dd_Smed_v6_16725_0_1, dd_Smed_v6_16725_0_1, [Score=207, Expect=2e-61]} {RNA1310_60376} {RNA815_27641}
5. MligTC455_11604 23 0.48 Mlig455_051147

Neo: -

Age: -

0.962 - - - 0.962 - - Mlig455_051147 {REF} {Length: 204} {NoTransDecoderORF} {RNA1310_26391} {RNA815_5978}
6. MligTC455_31544 54 1.13 Mlig455_019284

Neo: -

Age: Up-Down-Up

0.961 - - - 0.961 - - Mlig455_019284 {REF} {Length: 2664} {RNA1509_26962} {RNA1310_7663} {RNA815_9340}
7. MligTC455_46631 123 2.57 Mlig455_047437

Neo: -

Age: Down-Up-Down

GFI1 0.961 - - - - 0.961 - Mlig455_047437 {REF} {Length: 2141} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=92.6]; Zinc-finger double domain [PF13465.8, score=91.3]; C2H2-type zinc finger [PF13894.8, score=70.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=40.4]; C2H2-type zinc finger [PF13912.8, score=32.5]; BED zinc finger [PF02892.17, score=21.4]; Zinc-finger of C2H2 type [PF12874.9, score=19.3]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [RH, Score=297, Expect=7e-97]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [RH, Score=294, Expect=7e-97]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [RH, Score=299, Expect=8e-97]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [RH, Score=294, Expect=4e-97]} {Dmel: FBgn0051632, sens-2, senseless-2, [RH, Score=298, Expect=6e-94]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [RH, Score=236, Expect=8e-75]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [RH, Score=273, Expect=5e-89]} {RNA1509_50869} {RNA1310_63181} {RNA815_39346}
8. MligTC455_30448 296 6.17 Mlig455_038734, Mlig455_041307, Mlig455_068425

Neo: -

Age: -

Region-enriched R5: 2.411/0.02890

0.96 - - - - 0.960 -

Mlig455_038734 {REF} {Length: 5021} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=22.2]} {Smed: dd_Smed_v6_9588_0_1, dd_Smed_v6_9588_0_1, [Score=56.2, Expect=5e-08]} {RNA1509_36142} {RNA1310_11890.1} {RNA815_10630.1}

Mlig455_041307 {REF} {Length: 4321} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=22.2]} {Smed: dd_Smed_v6_9588_0_1, dd_Smed_v6_9588_0_1, [Score=56.2, Expect=5e-08]} {RNA1509_35224, RNA1509_40327} {RNA1310_11890.1, RNA1509_35224, RNA1509_40327} {RNA1509_35224, RNA1509_40327, RNA815_10630.1}

Mlig455_068425 {REF} {Length: 5624} {TRANSSPLICED} {RNA1509_36142} {RNA1310_11890.1} {RNA815_10630.1}
9. MligTC455_51312 38 0.8 Mlig455_015513

Neo: -

Age: -

0.959 - - - - 0.959 - Mlig455_015513 {REF} {Length: 670} {RNA1509_39535} {RNA1310_86982} {RNA815_28901}
10. MligTC455_09131 12 0.25 Mlig455_060831

Neo: -

Age: -

0.957 - - - 0.957 - - Mlig455_060831 {REF} {Length: 222} {NoTransDecoderORF} {RNA1509_37730} {RNA1310_49631.1} {RNA815_12906}
11. MligTC455_18400 27 0.55 Mlig455_003474

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_003474 {REF} {Length: 2642} {NoTransDecoderORF} {RNA1509_32550, RNA1509_38113} {RNA1310_35132, RNA1509_32550} {RNA1509_32550, RNA815_14295}
12. MligTC455_48403 23 0.47 Mlig455_025709, Mlig455_025732

Neo: -

Age: -

SLC10A5 0.953 - - - - 0.953 -

Mlig455_025709 {REF} {Length: 1577} {Pfam: Sodium Bile acid symporter family [PF01758.18, score=50.1]} {Human: ENSG00000253598, SLC10A5, solute carrier family 10 member 5, [Score=68.2, Expect=1e-11]} {Mouse: ENSMUSG00000029321, Slc10a6, solute carrier family 10 (sodium/bile acid cotransporter family), member 6, [Score=52.4, Expect=7e-07]; ENSMUSG00000058921, Slc10a5, solute carrier family 10 (sodium/bile acid cotransporter family), member 5, [Score=50.4, Expect=4e-06]} {Dmel: FBgn0030756, CG9903, [Score=53.1, Expect=4e-07]} {Celegans: WBGene00044650, Y71G10AR.4, [Score=80.5, Expect=6e-16]} {Smed: dd_Smed_v6_19173_0_1, dd_Smed_v6_19173_0_1, [Score=257, Expect=2e-79]} {RNA1310_130277}

Mlig455_025732 {REF} {Length: 2668} {Pfam: Sodium Bile acid symporter family [PF01758.18, score=49.6]} {Human: ENSG00000253598, SLC10A5, solute carrier family 10 member 5, [Score=68.9, Expect=7e-12]} {Mouse: ENSMUSG00000029321, Slc10a6, solute carrier family 10 (sodium/bile acid cotransporter family), member 6, [Score=52.8, Expect=6e-07]; ENSMUSG00000058921, Slc10a5, solute carrier family 10 (sodium/bile acid cotransporter family), member 5, [Score=52.0, Expect=1e-06]} {Dmel: FBgn0030756, CG9903, [Score=52.8, Expect=5e-07]} {Celegans: WBGene00044650, Y71G10AR.4, [Score=81.6, Expect=3e-16]} {Smed: dd_Smed_v6_19173_0_1, dd_Smed_v6_19173_0_1, [Score=258, Expect=1e-79]} {RNA1310_70652}
13. MligTC455_14009 6 0.12 Mlig455_059593

Neo: -

Age: -

0.951 - - - 0.951 - - Mlig455_059593 {REF} {Length: 242} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_54132} {RNA815_14343.2}
14. MligTC455_22420 33 0.68 Mlig455_009628

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_009628 {REF} {Length: 984} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5641) [PF18701.3, score=64.1]} {RNA1509_30133} {RNA1310_5295.2} {RNA815_4431}
15. MligTC455_48909 93 1.94 Mlig455_048405, Mlig455_049069

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.490

Region-enriched R2: 4.721/0.03142
Region-enriched R7: 4.417/0.01493

ASIC1 0.95 - - 0.950 - - -

Mlig455_048405 {REF} {Length: 2732} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=163.8]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=51.6, Expect=4e-06]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=55.8, Expect=1e-07]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=112, Expect=8e-26]} {RNA1310_26678} {RNA815_24347}

Mlig455_049069 {REF} {Length: 2732} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=163.8]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=51.2, Expect=5e-06]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=55.8, Expect=1e-07]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=112, Expect=8e-26]} {RNA1310_26678} {RNA815_24347}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA