TomoSeq data search

Data search

Results for MligTC455_18223

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18223

863

17.97

Mlig455_001563

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.468

NPR1

Mlig455_001563 {REF} {Length: 4023} {Pfam: Adenylate and Guanylate cyclase catalytic domain [PF00211.22, score=229.1]; Receptor family ligand binding region [PF01094.30, score=122.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.6]; Protein kinase domain [PF00069.27, score=113.6]} {Human: ENSG00000169418, NPR1, natriuretic peptide receptor 1, [Score=762, Expect=0.0]; ENSG00000159899, NPR2, natriuretic peptide receptor 2, [Score=736, Expect=0.0]} {Mouse: ENSMUSG00000028469, Npr2, natriuretic peptide receptor 2, [Score=739, Expect=0.0]} {Dmel: FBgn0051183, CG31183, [Score=776, Expect=0.0]} {Celegans: WBGene00020131, gcy-28, Receptor-type guanylate cyclase gcy-28, [Score=578, Expect=0.0]} {Smed: dd_Smed_v6_7644_0_1, dd_Smed_v6_7644_0_1, [Score=856, Expect=0.0]} {RNA1509_10530} {RNA1310_2951, RNA1509_10530} {RNA1509_10530, RNA815_6289}

Cumulative graph for MligTC455_18223

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.683	4.364	0.56025	1.00000
RegionR2	-0.516	4.364	0.52504	0.89801
RegionR3	-0.811	4.364	0.26678	0.81102
RegionR4	-0.68	4.364	0.42232	0.75047
RegionR5	-1.316	4.364	0.07702	0.25497
RegionR6	0.858	4.364	0.20650	0.78155
RegionR7	0.663	4.364	0.37208	1.00000
RegionR8	1.12	4.364	0.14554	0.69531

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-9.673	4.364	0.00648	0.38554
RegenerationR2	-1.172	4.364	0.18866	0.63224
RegenerationR3	-1.243	4.364	0.16449	0.59866
RegenerationR4	-1.555	4.364	0.09310	0.47576
RegenerationR5	-0.421	4.364	0.63635	0.92516
RegenerationR6	-1.65	4.364	0.07271	0.33679
RegenerationBL	-2.014	4.364	0.02605	0.17785
RegenerationTP	-1.526	4.364	0.10896	0.50880

Genes with expression patterns similar to MligTC455_18223

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18223	863	17.97	Mlig455_001563	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.468	NPR1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001563 {REF} {Length: 4023} {Pfam: Adenylate and Guanylate cyclase catalytic domain [PF00211.22, score=229.1]; Receptor family ligand binding region [PF01094.30, score=122.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.6]; Protein kinase domain [PF00069.27, score=113.6]} {Human: ENSG00000169418, NPR1, natriuretic peptide receptor 1, [Score=762, Expect=0.0]; ENSG00000159899, NPR2, natriuretic peptide receptor 2, [Score=736, Expect=0.0]} {Mouse: ENSMUSG00000028469, Npr2, natriuretic peptide receptor 2, [Score=739, Expect=0.0]} {Dmel: FBgn0051183, CG31183, [Score=776, Expect=0.0]} {Celegans: WBGene00020131, gcy-28, Receptor-type guanylate cyclase gcy-28, [Score=578, Expect=0.0]} {Smed: dd_Smed_v6_7644_0_1, dd_Smed_v6_7644_0_1, [Score=856, Expect=0.0]} {RNA1509_10530} {RNA1310_2951, RNA1509_10530} {RNA1509_10530, RNA815_6289}
2.	MligTC455_21918	443	9.24	Mlig455_054083	Neo: - Age: -		1.755	-	-	-	-	0.962	0.793	Mlig455_054083 {REF} {Length: 5623} {TRANSSPLICED} {Pfam: Bravo-like intracellular region [PF13882.8, score=27.1]; Syndecan domain [PF01034.22, score=26.4]; African swine fever virus J13L protein [PF05568.13, score=20.7]; Family of unknown function (DUF6479) [PF20087.1, score=19.6]} {RNA1509_16616} {RNA1310_3827.1} {RNA815_1424.1}
3.	MligTC455_26194	157	3.28	Mlig455_024082	Neo: - Age: Up-Down-Up Region-enriched R4: 3.176/0.00217	PEF1	1.679	0.723	-	-	-	-	0.956	Mlig455_024082 {REF} {Length: 2386} {Pfam: EF-hand domain [PF13405.8, score=57.7]; EF hand [PF00036.34, score=54.7]; EF-hand domain pair [PF13499.8, score=52.8]; EF hand [PF13202.8, score=43.0]; EF-hand domain pair [PF13833.8, score=35.0]} {Human: ENSG00000162517, PEF1, penta-EF-hand domain containing 1, [Score=93.6, Expect=7e-22]} {Mouse: ENSMUSG00000028779, Pef1, penta-EF hand domain containing 1, [Score=94.4, Expect=2e-22]} {Dmel: FBgn0033529, CG17765, [Score=97.8, Expect=2e-24]} {Celegans: WBGene00019770, M04F3.4, [Score=84.0, Expect=9e-20]} {Smed: dd_Smed_v6_6190_0_1, dd_Smed_v6_6190_0_1, [Score=96.7, Expect=1e-24]} {RNA1509_8928} {RNA1310_11493} {RNA815_7652.1}
4.	MligTC455_28636	135	2.8	Mlig455_046879	Neo: - Age: - Region-enriched R2: 3.948/0.00711	PHKA1	0.953	-	-	-	-	-	0.953	Mlig455_046879 {REF} {Length: 7306} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 15 [PF00723.23, score=349.3]; Phosphorylase b kinase C-terminal domain [PF19292.1, score=85.7]} {Human: ENSG00000067177, PHKA1, phosphorylase kinase regulatory subunit alpha 1, [Score=593, Expect=0.0]; ENSG00000044446, PHKA2, phosphorylase kinase regulatory subunit alpha 2, [Score=583, Expect=0.0]} {Mouse: ENSMUSG00000031295, Phka2, phosphorylase kinase alpha 2, [Score=597, Expect=0.0]; ENSMUSG00000034055, Phka1, phosphorylase kinase alpha 1, [Score=591, Expect=0.0]} {Dmel: FBgn0030087, CG7766, [Score=623, Expect=0.0]} {Celegans: WBGene00015754, C14B9.8, Probable phosphorylase b kinase regulatory subunit alpha, [Score=751, Expect=0.0]} {Smed: dd_Smed_v6_6919_0_1, dd_Smed_v6_6919_0_1, [Score=1031, Expect=0.0]} {RNA1509_9598} {RNA1310_2181, RNA1509_9598} {RNA1509_9598, RNA815_2765}
5.	MligTC455_34777	69	1.44	Mlig455_035630	Neo: - Age: logFC(26M/2M)=-0.318	ERP44	0.952	-	-	-	-	-	0.952	Mlig455_035630 {REF} {Length: 2690} {TRANSSPLICED} {Pfam: Thioredoxin-like domain [PF13848.8, score=120.1]; Thioredoxin [PF00085.22, score=68.1]; OST3 / OST6 family, transporter family [PF04756.15, score=22.6]; Calsequestrin [PF01216.19, score=22.0]; Thioredoxin-like domain [PF13098.8, score=20.4]} {Human: ENSG00000023318, ERP44, endoplasmic reticulum protein 44, [RH, Score=325, Expect=5e-108]} {Mouse: ENSMUSG00000028343, Erp44, endoplasmic reticulum protein 44, [RH, Score=334, Expect=1e-111]} {Dmel: FBgn0030734, CG9911, [RH, Score=326, Expect=2e-108]} {Celegans: WBGene00016278, erp-44.1, [RH, Score=322, Expect=6e-107]} {Smed: dd_Smed_v6_2276_0_1, dd_Smed_v6_2276_0_1, [RH, Score=301, Expect=6e-99]} {RNA1509_4780} {RNA1310_8582.1, RNA1509_4780} {RNA1509_4780, RNA815_6943}

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