M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_18231

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18231 402 8.38 Mlig455_065159

Neo: -

Age: -

 FDXR Mlig455_065159 {REF} {Length: 2513} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=39.3]} {Human: ENSG00000161513, FDXR, ferredoxin reductase, [RH, Score=385, Expect=3e-129]} {Mouse: ENSMUSG00000018861, Fdxr, ferredoxin reductase, [RH, Score=366, Expect=1e-121]} {Dmel: FBgn0015582, dare, defective in the avoidance of repellents, [RH, Score=338, Expect=2e-111]} {Celegans: WBGene00013376, Y62E10A.6, NADPH:adrenodoxin oxidoreductase, mitochondrial, [RH, Score=242, Expect=1e-74]} {Smed: dd_Smed_v6_8668_0_12, dd_Smed_v6_8668_0_12, [RH, Score=377, Expect=6e-127]} {RNA1509_20793} {RNA1310_17259, RNA1509_20793} {RNA1509_20793, RNA815_16283}

Cumulative graph for MligTC455_18231

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.88 3.567 0.42691 1.00000
RegionR2 -0.27 3.567 0.63465 0.97425
RegionR3 0.09 3.567 0.82257 1.00000
RegionR4 0.369 3.567 0.45401 0.78272
RegionR5 0.819 3.567 0.01826 0.09060
RegionR6 0.149 3.567 0.72216 1.00000
RegionR7 0.539 3.567 0.33178 0.96642
RegionR8 -2.577 3.567 0.01725 0.25518

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.328 3.567 0.15616 0.89908
RegenerationR2 0.905 3.567 0.03546 0.31077
RegenerationR3 0.523 3.567 0.24624 0.68028
RegenerationR4 0.06 3.567 0.89322 1.00000
RegenerationR5 0.35 3.567 0.34262 0.75926
RegenerationR6 0.484 3.567 0.30012 0.65017
RegenerationBL 0.418 3.567 0.61264 0.95732
RegenerationTP 1.416 3.567 0.08089 0.45186


Genes with expression patterns similar to MligTC455_18231

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18231 402 8.38 Mlig455_065159

Neo: -

Age: -

 FDXR 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_065159 {REF} {Length: 2513} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=39.3]} {Human: ENSG00000161513, FDXR, ferredoxin reductase, [RH, Score=385, Expect=3e-129]} {Mouse: ENSMUSG00000018861, Fdxr, ferredoxin reductase, [RH, Score=366, Expect=1e-121]} {Dmel: FBgn0015582, dare, defective in the avoidance of repellents, [RH, Score=338, Expect=2e-111]} {Celegans: WBGene00013376, Y62E10A.6, NADPH:adrenodoxin oxidoreductase, mitochondrial, [RH, Score=242, Expect=1e-74]} {Smed: dd_Smed_v6_8668_0_12, dd_Smed_v6_8668_0_12, [RH, Score=377, Expect=6e-127]} {RNA1509_20793} {RNA1310_17259, RNA1509_20793} {RNA1509_20793, RNA815_16283}
2. MligTC455_51576 2440 50.84 Mlig455_000228, Mlig455_058486

Neo: -

Age: -

 DCAF11 2.499 - 0.733 - - 0.801 0.965

Mlig455_000228 {REF} {Length: 2346} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=49.4]} {Human: ENSG00000284796, DCAF11, DDB1 and CUL4 associated factor 11, [RH, Score=266, Expect=9e-82]; ENSG00000100897, DCAF11, DDB1 and CUL4 associated factor 11, [RH, Score=266, Expect=9e-82]} {Mouse: ENSMUSG00000022214, Dcaf11, DDB1 and CUL4 associated factor 11, [RH, Score=264, Expect=4e-81]} {Dmel: FBgn0034527, CG9945, [RH, Score=232, Expect=2e-69]} {Celegans: WBGene00008419, wdr-23, DDB1- and CUL4-associated factor 11 homolog, [RH, Score=220, Expect=7e-65]} {Smed: dd_Smed_v6_3496_0_1, dd_Smed_v6_3496_0_1, [Score=64.7, Expect=3e-11]} {RNA1509_16796} {RNA1310_9927.1} {RNA815_4628.1}

Mlig455_058486 {REF} {Length: 2357} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=46.3]} {Human: ENSG00000100897, DCAF11, DDB1 and CUL4 associated factor 11, [RH, Score=269, Expect=3e-83]; ENSG00000284796, DCAF11, DDB1 and CUL4 associated factor 11, [RH, Score=269, Expect=3e-83]} {Mouse: ENSMUSG00000022214, Dcaf11, DDB1 and CUL4 associated factor 11, [RH, Score=267, Expect=2e-82]} {Dmel: FBgn0034527, CG9945, [RH, Score=230, Expect=7e-69]} {Celegans: WBGene00008419, wdr-23, DDB1- and CUL4-associated factor 11 homolog, [RH, Score=219, Expect=2e-64]} {Smed: dd_Smed_v6_3496_0_1, dd_Smed_v6_3496_0_1, [Score=63.5, Expect=8e-11]} {RNA1509_16796} {RNA1310_9927.1} {RNA815_4628.1}
3. MligTC455_15174 740 15.42 Mlig455_056362

Neo: -

Age: Up-Down-Down

 GAB1 1.824 0.859 0.965 - - - - Mlig455_056362 {REF} {Length: 4530} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=44.7]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=24.2]} {Human: ENSG00000109458, GAB1, GRB2 associated binding protein 1, [RH, Score=58.2, Expect=2e-08]} {Mouse: ENSMUSG00000032750, Gab3, growth factor receptor bound protein 2-associated protein 3, [Score=53.1, Expect=5e-07]; ENSMUSG00000031714, Gab1, growth factor receptor bound protein 2-associated protein 1, [Score=52.4, Expect=1e-06]} {Dmel: FBgn0016794, dos, daughter of sevenless, [RH, Score=55.1, Expect=1e-07]} {Smed: dd_Smed_v6_8815_0_1, dd_Smed_v6_8815_0_1, [RH, Score=51.2, Expect=8e-07]} {RNA1509_7659} {RNA1310_17916.1} {RNA815_24797}
4. MligTC455_17074 854 17.79 Mlig455_039446, Mlig455_039491

Neo: -

Age: -

Region-enriched R5: 1.202/0.00436

 RTCB 1.807 - 0.955 - - - 0.852

Mlig455_039446 {REF} {Length: 3848} {TRANSSPLICED} {Pfam: tRNA-splicing ligase RtcB [PF01139.19, score=495.3]} {Human: ENSG00000100220, RTCB, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=884, Expect=0.0]} {Mouse: ENSMUSG00000001783, Rtcb, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=880, Expect=0.0]} {Dmel: FBgn0032781, RtcB, RtcB-like, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00008877, rtcb-1, tRNA-splicing ligase RtcB homolog, [RH, Score=805, Expect=0.0]} {Smed: dd_Smed_v6_5115_0_1, dd_Smed_v6_5115_0_1, [RH, Score=876, Expect=0.0]} {RNA1509_10458} {RNA1310_18187, RNA1509_10458} {RNA1509_10458, RNA815_12172}

Mlig455_039491 {REF} {Length: 3869} {TRANSSPLICED} {Pfam: tRNA-splicing ligase RtcB [PF01139.19, score=495.3]} {Human: ENSG00000100220, RTCB, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=884, Expect=0.0]} {Mouse: ENSMUSG00000001783, Rtcb, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=880, Expect=0.0]} {Dmel: FBgn0032781, RtcB, RtcB-like, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00008877, rtcb-1, tRNA-splicing ligase RtcB homolog, [RH, Score=805, Expect=0.0]} {Smed: dd_Smed_v6_5115_0_1, dd_Smed_v6_5115_0_1, [RH, Score=876, Expect=0.0]} {RNA1509_10458} {RNA1310_18187} {RNA815_12172}
5. MligTC455_25177 330 6.87 Mlig455_058575

Neo: -

Age: Up-Down-Down

 1.681 - 0.951 - - 0.730 - Mlig455_058575 {REF} {Length: 3172} {RNA1509_34496, RNA1509_56824} {RNA1310_29369, RNA1509_34496} {RNA1509_34496, RNA815_24472}
6. MligTC455_28536 635 13.23 Mlig455_008567

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.242/0.00328

 TASP1 1.675 - - - 0.971 0.704 - Mlig455_008567 {REF} {Length: 1546} {TRANSSPLICED} {Pfam: Asparaginase [PF01112.20, score=114.7]} {Human: ENSG00000089123, TASP1, taspase 1, [RH, Score=192, Expect=6e-56]} {Mouse: ENSMUSG00000039033, Tasp1, taspase, threonine aspartase 1, [RH, Score=177, Expect=1e-50]} {Dmel: FBgn0263602, Tasp1, Taspase 1, [RH, Score=130, Expect=1e-33]} {Smed: dd_Smed_v6_8716_1_1, dd_Smed_v6_8716_1_1, [RH, Score=159, Expect=1e-44]} {RNA1509_8921} {RNA1310_17191, RNA1509_8921} {RNA1509_8921, RNA815_26699}
7. MligTC455_19154 1954 40.7 Mlig455_003096, Mlig455_062794

Neo: Int S/G2/M

Age: -

 CBLL1 0.966 - 0.966 - - - -

Mlig455_003096 {REF} {Length: 1778} {TRANSSPLICED} {Pfam: C2H2 Hakai zinc finger domain [PF18408.3, score=45.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.6]} {Human: ENSG00000105879, CBLL1, Cbl proto-oncogene like 1, [RH, Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000020659, Cbll1, Casitas B-lineage lymphoma-like 1, [RH, Score=105, Expect=3e-24]} {Dmel: FBgn0032812, Hakai, [RH, Score=110, Expect=3e-26]} {Smed: dd_Smed_v6_7426_0_1, dd_Smed_v6_7426_0_1, [RH, Score=110, Expect=1e-26]} {RNA1509_14237, RNA1509_38673, RNA1509_9686} {RNA1310_15460, RNA1509_14237, RNA1509_38673, RNA1509_9686} {RNA1509_14237, RNA1509_38673, RNA1509_9686, RNA815_10507}

Mlig455_062794 {REF} {Length: 1769} {TRANSSPLICED} {Pfam: C2H2 Hakai zinc finger domain [PF18408.3, score=45.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.6]} {Human: ENSG00000105879, CBLL1, Cbl proto-oncogene like 1, [RH, Score=101, Expect=7e-23]} {Mouse: ENSMUSG00000020659, Cbll1, Casitas B-lineage lymphoma-like 1, [RH, Score=102, Expect=1e-23]} {Dmel: FBgn0032812, Hakai, [RH, Score=107, Expect=3e-25]} {Smed: dd_Smed_v6_7426_0_1, dd_Smed_v6_7426_0_1, [RH, Score=107, Expect=2e-25]} {RNA1509_9686} {RNA1310_15460} {RNA815_10507}
8. MligTC455_52927 716 14.91 Mlig455_043674

Neo: -

Age: Down-Down-Up

 MAGI2 0.963 - 0.963 - - - - Mlig455_043674 {REF} {Length: 4877} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=220.2]; PDZ domain [PF17820.3, score=142.9]; PDZ domain [PF13180.8, score=87.0]; Guanylate kinase [PF00625.23, score=42.8]; WW domain [PF00397.28, score=35.9]} {Human: ENSG00000187391, MAGI2, membrane associated guanylate kinase, WW and PDZ domain containing 2, [Score=314, Expect=5e-89]} {Mouse: ENSMUSG00000052539, Magi3, membrane associated guanylate kinase, WW and PDZ domain containing 3, [RH, Score=289, Expect=3e-80]} {Dmel: FBgn0034590, Magi, [RH, Score=214, Expect=1e-56]} {Celegans: WBGene00010444, magi-1, MAGI (Membrane Associated Guanylate kinase Inverted) homolog, [RH, Score=311, Expect=1e-89]} {Smed: dd_Smed_v6_854_0_3, dd_Smed_v6_854_0_3, [RH, Score=676, Expect=0.0]} {RNA1509_8632} {RNA1310_3024, RNA1509_8632} {RNA1509_8632, RNA815_10565}
9. MligTC455_41955 474 9.88 Mlig455_002789

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_002789 {REF} {Length: 1023} {TRANSSPLICED} {RNA1509_59252} {RNA1310_34863, RNA1509_59252} {RNA1509_59252, RNA815_16810}
10. MligTC455_44765 2184 45.5 Mlig455_037351

Neo: Int S/G2/M

Age: -

 ZFAND6 0.958 - - - - 0.958 - Mlig455_037351 {REF} {Length: 2645} {TRANSSPLICED} {Pfam: AN1-like Zinc finger [PF01428.18, score=39.0]; A20-like zinc finger [PF01754.18, score=30.5]} {Human: ENSG00000086666, ZFAND6, zinc finger AN1-type containing 6, [RH, Score=143, Expect=9e-42]} {Mouse: ENSMUSG00000030629, Zfand6, zinc finger, AN1-type domain 6, [RH, Score=146, Expect=8e-43]} {Dmel: FBgn0266410, CG45050, [Score=132, Expect=1e-37]} {Celegans: WBGene00009050, F22D6.2, [Score=112, Expect=1e-30]} {Smed: dd_Smed_v6_6909_0_1, dd_Smed_v6_6909_0_1, [Score=115, Expect=3e-31]} {RNA1509_18337} {RNA1310_9081.2} {RNA815_4488.1}
11. MligTC455_38362 1015 21.16 Mlig455_045508

Neo: -

Age: -

Region-enriched R4: 1.693/0.01745
Region-enriched R5: 1.163/0.02906

 AADAC 0.957 - 0.957 - - - - Mlig455_045508 {REF} {Length: 2224} {Pfam: alpha/beta hydrolase fold [PF07859.15, score=113.1]; Carboxylesterase family [PF00135.30, score=19.9]} {Human: ENSG00000114771, AADAC, arylacetamide deacetylase, [Score=96.3, Expect=2e-21]; ENSG00000197953, AADACL2, arylacetamide deacetylase like 2, [Score=93.6, Expect=2e-20]; ENSG00000261846, AADACL2, arylacetamide deacetylase like 2, [Score=93.6, Expect=2e-20]} {Mouse: ENSMUSG00000090527, Gm5538, predicted gene 5538, [Score=102, Expect=1e-23]; ENSMUSG00000095522, Gm8298, predicted gene 8298, [Score=98.2, Expect=3e-22]} {Dmel: FBgn0034491, Hsl, Hormone-sensitive lipase, [Score=65.5, Expect=4e-11]} {Celegans: WBGene00012810, nceh-1, Neutral Cholesterol Ester Hydrolase homolog, [Score=98.2, Expect=2e-22]} {Smed: dd_Smed_v6_4674_0_1, dd_Smed_v6_4674_0_1, [Score=82.0, Expect=5e-17]} {RNA1509_14307} {RNA1310_15560.2} {RNA815_8354}
12. MligTC455_43824 958 19.97 Mlig455_044228, Mlig455_044247

Neo: -

Age: -

 SF3B2 0.955 - 0.955 - - - -

Mlig455_044228 {REF} {Length: 2484} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF382) [PF04037.15, score=190.9]; PSP [PF04046.18, score=66.7]} {Human: ENSG00000087365, SF3B2, splicing factor 3b subunit 2, [RH, Score=478, Expect=7e-159]} {Mouse: ENSMUSG00000024853, Sf3b2, splicing factor 3b, subunit 2, [RH, Score=476, Expect=5e-158]} {Dmel: FBgn0031493, Sf3b2, Splicing factor 3b subunit 2, [RH, Score=464, Expect=2e-155]} {Celegans: WBGene00021004, sftb-2, Splicing Factor ThreeB (3b) Subunit homolog, [RH, Score=410, Expect=2e-136]} {Smed: dd_Smed_v6_2932_0_1, dd_Smed_v6_2932_0_1, [RH, Score=439, Expect=2e-148]} {RNA1509_3603} {RNA1310_8711} {RNA815_178.1}

Mlig455_044247 {REF} {Length: 2482} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF382) [PF04037.15, score=190.9]; PSP [PF04046.18, score=66.6]} {Human: ENSG00000087365, SF3B2, splicing factor 3b subunit 2, [RH, Score=478, Expect=5e-159]} {Mouse: ENSMUSG00000024853, Sf3b2, splicing factor 3b, subunit 2, [RH, Score=475, Expect=6e-158]} {Dmel: FBgn0031493, Sf3b2, Splicing factor 3b subunit 2, [RH, Score=464, Expect=2e-155]} {Celegans: WBGene00021004, sftb-2, Splicing Factor ThreeB (3b) Subunit homolog, [RH, Score=410, Expect=2e-136]} {Smed: dd_Smed_v6_2932_0_1, dd_Smed_v6_2932_0_1, [RH, Score=438, Expect=4e-148]} {RNA1509_3603} {RNA1310_8711, RNA1509_3603} {RNA1509_3603, RNA815_178.1}
13. MligTC455_28659 416 8.67 Mlig455_024182

Neo: -

Age: Up-Down-Down

 0.954 - 0.954 - - - - Mlig455_024182 {REF} {Length: 2105} {RNA1509_38550} {RNA1310_39388.2} {RNA815_16516.1}
14. MligTC455_25189 392 8.17 Mlig455_062815

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.330

 FNIP2 0.953 - - - - 0.953 - Mlig455_062815 {REF} {Length: 6419} {TRANSSPLICED} {Pfam: Folliculin-interacting protein middle domain [PF14637.8, score=130.1]; Folliculin-interacting protein C-terminus [PF14638.8, score=83.8]; Folliculin-interacting protein N-terminus [PF14636.8, score=47.2]} {Human: ENSG00000052795, FNIP2, folliculin interacting protein 2, [RH, Score=105, Expect=2e-22]} {Mouse: ENSMUSG00000061175, Fnip2, folliculin interacting protein 2, [RH, Score=108, Expect=1e-23]} {Dmel: FBgn0036684, CG3764, [RH, Score=87.4, Expect=4e-17]} {Smed: dd_Smed_v6_5866_0_2, dd_Smed_v6_5866_0_2, [RH, Score=80.5, Expect=3e-15]} {RNA1509_12160} {RNA1310_4135.1} {RNA815_10342}
15. MligTC455_41526 617 12.85 Mlig455_023413

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=1.035

 TXLNA 0.953 - 0.953 - - - - Mlig455_023413 {REF} {Length: 3036} {TRANSSPLICED} {Pfam: Myosin-like coiled-coil protein [PF09728.11, score=295.5]} {Human: ENSG00000084652, TXLNA, taxilin alpha, [RH, Score=258, Expect=2e-78]} {Mouse: ENSMUSG00000053841, Txlna, taxilin alpha, [RH, Score=258, Expect=1e-78]} {Dmel: FBgn0039379, CG5886, [RH, Score=164, Expect=4e-44]} {Celegans: WBGene00011917, T22C1.6, [RH, Score=113, Expect=2e-27]} {Smed: dd_Smed_v6_5772_0_1, dd_Smed_v6_5772_0_1, [RH, Score=206, Expect=6e-61]} {RNA1509_8650} {RNA1310_6502.1, RNA1509_8650} {RNA1509_8650, RNA815_10103}
16. MligTC455_42047 894 18.62 Mlig455_014047

Neo: -

Age: -

Region-enriched R4: 1.635/0.01859

 0.953 - 0.953 - - - - Mlig455_014047 {REF} {Length: 816} {RNA1509_37504} {RNA1310_46399} {RNA815_23029}
17. MligTC455_46211 479 9.98 Mlig455_014662

Neo: -

Age: -

Region-enriched R4: 2.073/0.02650
Region-enriched R3: 2.057/0.02308

 FAIM 0.953 - 0.953 - - - - Mlig455_014662 {REF} {Length: 1340} {TRANSSPLICED} {Pfam: Fas apoptotic inhibitory molecule (FAIM1) [PF06905.15, score=184.7]} {Human: ENSG00000158234, FAIM, Fas apoptotic inhibitory molecule, [Score=156, Expect=7e-48]} {Mouse: ENSMUSG00000032463, Faim, Fas apoptotic inhibitory molecule, [Score=155, Expect=2e-47]} {Dmel: FBgn0033985, CG10257, [Score=104, Expect=1e-27]} {Celegans: WBGene00016633, C44B11.1, [Score=143, Expect=5e-43]} {Smed: dd_Smed_v6_9854_0_1, dd_Smed_v6_9854_0_1, [Score=127, Expect=1e-36]} {RNA1509_37986} {RNA1310_24319} {RNA815_17408.1}
18. MligTC455_39641 282 5.87 Mlig455_066004

Neo: -

Age: -

 CENPJ 0.952 - 0.952 - - - - Mlig455_066004 {REF} {Length: 5246} {TRANSSPLICED} {Pfam: T-complex protein 10 C-terminus [PF07202.15, score=140.0]} {Human: ENSG00000151849, CENPJ, centromere protein J, [RH, Score=280, Expect=2e-78]} {Mouse: ENSMUSG00000064128, Cenpj, centromere protein J, [RH, Score=224, Expect=7e-60]} {Dmel: FBgn0011020, Sas-4, Spindle assembly abnormal 4, [RH, Score=166, Expect=9e-42]} {Smed: dd_Smed_v6_13670_0_1, dd_Smed_v6_13670_0_1, [RH, Score=185, Expect=7e-48]} {RNA1509_12944, RNA1509_43440, RNA1509_44983, RNA1509_48180} {RNA1310_11119.1, RNA1509_12944, RNA1509_43440, RNA1509_44983, RNA1509_48180} {RNA1509_12944, RNA1509_43440, RNA1509_44983, RNA1509_48180, RNA815_9505}
19. MligTC455_43794 798 16.63 Mlig455_027852

Neo: Neoblast

Age: -

 LEO1 0.952 - 0.952 - - - - Mlig455_027852 {REF} {Length: 4174} {TRANSSPLICED} {Pfam: Leo1-like protein [PF04004.15, score=168.1]} {Human: ENSG00000166477, LEO1, LEO1 homolog, Paf1/RNA polymerase II complex component, [RH, Score=269, Expect=3e-81]} {Mouse: ENSMUSG00000042487, Leo1, Leo1, Paf1/RNA polymerase II complex component, [RH, Score=270, Expect=1e-81]} {Dmel: FBgn0019637, Atu, Another transcription unit, [RH, Score=269, Expect=6e-81]} {Celegans: WBGene00007110, leo-1, RNA polymerase-associated protein LEO1, [RH, Score=196, Expect=2e-56]} {Smed: dd_Smed_v6_3566_0_1, dd_Smed_v6_3566_0_1, [RH, Score=284, Expect=8e-90]} {RNA1509_6252} {RNA1310_8572.1, RNA1509_6252} {RNA1509_6252, RNA815_5382}
20. MligTC455_47474 125 2.6 Mlig455_008057

Neo: Int S/G2/M

Age: -

 POLR2G 0.952 - 0.952 - - - - Mlig455_008057 {REF} {Length: 2319} {Pfam: S1 RNA binding domain [PF00575.25, score=55.5]; SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 [PF03876.19, score=43.8]} {Human: ENSG00000168002, POLR2G, RNA polymerase II subunit G, [RH, Score=261, Expect=5e-90]} {Mouse: ENSMUSG00000071662, Polr2g, polymerase (RNA) II (DNA directed) polypeptide G, [RH, Score=261, Expect=3e-90]} {Dmel: FBgn0051155, Rpb7, [RH, Score=243, Expect=3e-83]} {Celegans: WBGene00021845, rpb-7, RNA Polymerase II (B) subunit, [RH, Score=243, Expect=6e-83]} {Smed: dd_Smed_v6_6411_0_1, dd_Smed_v6_6411_0_1, [RH, Score=205, Expect=4e-68]} {RNA1509_27027} {RNA1310_27629} {RNA815_7998}
21. MligTC455_03600 172 3.59 Mlig455_031645

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.335

 NIT2 0.951 - 0.951 - - - - Mlig455_031645 {REF} {Length: 967} {TRANSSPLICED} {Pfam: Carbon-nitrogen hydrolase [PF00795.24, score=210.9]} {Human: ENSG00000114021, NIT2, nitrilase family member 2, [RH, Score=306, Expect=2e-104]} {Mouse: ENSMUSG00000022751, Nit2, nitrilase family, member 2, [RH, Score=308, Expect=4e-105]} {Dmel: FBgn0037687, CG8132, [RH, Score=271, Expect=8e-91]} {Celegans: WBGene00003594, nft-1, Nitrilase and fragile histidine triad fusion protein NitFhit Bis(5'-adenosyl)-triphosphatase Nitrilase homolog, [Score=156, Expect=2e-44]} {Smed: dd_Smed_v6_1734_0_1, dd_Smed_v6_1734_0_1, [RH, Score=263, Expect=7e-88]} {RNA1509_7842} {RNA1310_13706.2, RNA1509_7842} {RNA1509_7842, RNA815_18016}
22. MligTC455_51590 320 6.67 Mlig455_044222

Neo: -

Age: logFC(26M/2M)=0.392

 PARS2 0.951 - 0.951 - - - - Mlig455_044222 {REF} {Length: 2181} {TRANSSPLICED} {Pfam: tRNA synthetase class II core domain (G, H, P, S and T) [PF00587.27, score=104.4]} {Human: ENSG00000162396, PARS2, prolyl-tRNA synthetase 2, mitochondrial, [RH, Score=267, Expect=9e-84]} {Mouse: ENSMUSG00000043572, Pars2, prolyl-tRNA synthetase (mitochondrial)(putative), [RH, Score=267, Expect=7e-84]} {Dmel: FBgn0027082, ProRS-m, Prolyl-tRNA synthetase, mitochondrial, [RH, Score=263, Expect=1e-82]} {Celegans: WBGene00004190, pars-2, Prolyl Amino-acyl tRNA Synthetase, [RH, Score=230, Expect=3e-70]} {Smed: dd_Smed_v6_12333_0_1, dd_Smed_v6_12333_0_1, [RH, Score=298, Expect=1e-96]} {RNA1509_2645, RNA1509_54847} {RNA1310_14961.1, RNA1509_2645, RNA1509_54847} {RNA1509_2645, RNA1509_54847, RNA815_4246}
23. MligTC455_29138 150 3.13 Mlig455_047030

Neo: -

Age: Up-Down-Up

 EFR3A 0.95 - 0.950 - - - - Mlig455_047030 {REF} {Length: 5267} {TRANSSPLICED} {Pfam: ZIP Zinc transporter [PF02535.24, score=66.2]} {Human: ENSG00000132294, EFR3A, EFR3 homolog A, [RH, Score=343, Expect=2e-103]; ENSG00000084710, EFR3B, EFR3 homolog B, [RH, Score=327, Expect=2e-97]} {Mouse: ENSMUSG00000015002, Efr3a, EFR3 homolog A, [Score=346, Expect=4e-104]} {Dmel: FBgn0086784, stmA, stambha A, [Score=315, Expect=4e-93]} {Celegans: WBGene00016311, C32D5.3, Protein EFR3 homolog, [Score=249, Expect=2e-69]} {Smed: dd_Smed_v6_3212_0_1, dd_Smed_v6_3212_0_1, [RH, Score=397, Expect=5e-123]} {RNA1509_14238} {RNA1310_2165.2} {RNA815_4536}
24. MligTC455_52302 1158 24.12 Mlig455_057337

Neo: -

Age: -

 PPP2R5A 0.95 - 0.950 - - - - Mlig455_057337 {REF} {Length: 3320} {TRANSSPLICED} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=587.3]} {Human: ENSG00000066027, PPP2R5A, protein phosphatase 2 regulatory subunit B'alpha, [RH, Score=670, Expect=0.0]; ENSG00000154001, PPP2R5E, protein phosphatase 2 regulatory subunit B'epsilon, [RH, Score=653, Expect=0.0]} {Mouse: ENSMUSG00000026626, Ppp2r5a, protein phosphatase 2, regulatory subunit B', alpha, [RH, Score=680, Expect=0.0]; ENSMUSG00000021051, Ppp2r5e, protein phosphatase 2, regulatory subunit B', epsilon, [RH, Score=654, Expect=0.0]} {Dmel: FBgn0027492, wdb, widerborst, [RH, Score=684, Expect=0.0]} {Celegans: WBGene00012348, pptr-1, Serine/threonine-protein phosphatase 2A regulatory subunit pptr-1, [RH, Score=640, Expect=0.0]} {Smed: dd_Smed_v6_2613_0_4, dd_Smed_v6_2613_0_4, [RH, Score=716, Expect=0.0]} {RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347} {RNA1310_4841, RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347} {RNA1509_13623, RNA1509_27958, RNA1509_3099, RNA1509_36347, RNA815_2935}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA