TomoSeq data search

Data search

Results for MligTC455_18236

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_18236	242	5.04	Mlig455_019970	Neo: Int S/G2/M Age: -	PRR9	Mlig455_019970 {REF} {Length: 710} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.1, Expect=9e-07]} {RNA1509_1430} {RNA1310_34273} {RNA815_13584}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_18236

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.757	2.857	0.19941	0.83520
RegionR2	0.932	2.857	0.44243	0.83157
RegionR3	1.053	2.857	0.30751	0.84688
RegionR4	-0.257	2.857	0.92009	1.00000
RegionR5	0.798	2.857	0.42595	0.78580
RegionR6	1.215	2.857	0.23981	0.82446
RegionR7	1.904	2.857	0.07179	0.51637
RegionR8	0.111	2.857	0.84700	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.791	2.857	0.25687	0.96756
RegenerationR2	0.129	2.857	0.87267	1.00000
RegenerationR3	0.175	2.857	0.83714	0.99292
RegenerationR4	1.586	2.857	0.07418	0.43286
RegenerationR5	-0.182	2.857	0.82394	0.99563
RegenerationR6	0.483	2.857	0.55425	0.84170
RegenerationBL	0.37	2.857	0.70321	1.00000
RegenerationTP	0.73	2.857	0.49030	0.89573

Genes with expression patterns similar to MligTC455_18236

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18236	242	5.04	Mlig455_019970	Neo: Int S/G2/M Age: -	PRR9	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_019970 {REF} {Length: 710} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.1, Expect=9e-07]} {RNA1509_1430} {RNA1310_34273} {RNA815_13584}
2.	MligTC455_42471	4012	83.59	Mlig455_049199	Neo: - Age: - Region-enriched R8: 2.937/0.00000 Region-enriched R7: 2.186/0.00001 Region-enriched R6: 1.520/0.01428	RCN1	0.967	-	-	0.967	-	-	-	Mlig455_049199 {REF} {Length: 1961} {Pfam: EF hand [PF00036.34, score=63.6]; EF-hand domain [PF13405.8, score=60.3]; EF-hand domain pair [PF13499.8, score=57.8]; EF hand [PF13202.8, score=46.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=33.4]; EF-hand domain pair [PF13833.8, score=30.6]} {Human: ENSG00000049449, RCN1, reticulocalbin 1, [Score=210, Expect=7e-65]; ENSG00000128595, CALU, calumenin, [Score=204, Expect=5e-63]} {Mouse: ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=211, Expect=1e-65]; ENSMUSG00000029767, Calu, calumenin, [Score=204, Expect=6e-63]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=193, Expect=1e-58]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=197, Expect=1e-60]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=212, Expect=1e-66]} {RNA1509_11145, RNA1509_1795, RNA1509_21046, RNA1509_45668} {RNA1310_18885, RNA1509_11145, RNA1509_1795, RNA1509_21046, RNA1509_45668} {RNA1509_11145, RNA1509_1795, RNA1509_21046, RNA1509_45668, RNA815_7394}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_18236

242

5.04

Mlig455_019970

Neo: Int S/G2/M

Age: -

PRR9

1.000

Mlig455_019970 {REF} {Length: 710} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.1, Expect=9e-07]} {RNA1509_1430} {RNA1310_34273} {RNA815_13584}

MligTC455_42471

4012

83.59

Mlig455_049199

Neo: -

Age: -

Region-enriched R8: 2.937/0.00000
Region-enriched R7: 2.186/0.00001
Region-enriched R6: 1.520/0.01428

RCN1

0.967

Mlig455_049199 {REF} {Length: 1961} {Pfam: EF hand [PF00036.34, score=63.6]; EF-hand domain [PF13405.8, score=60.3]; EF-hand domain pair [PF13499.8, score=57.8]; EF hand [PF13202.8, score=46.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=33.4]; EF-hand domain pair [PF13833.8, score=30.6]} {Human: ENSG00000049449, RCN1, reticulocalbin 1, [Score=210, Expect=7e-65]; ENSG00000128595, CALU, calumenin, [Score=204, Expect=5e-63]} {Mouse: ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=211, Expect=1e-65]; ENSMUSG00000029767, Calu, calumenin, [Score=204, Expect=6e-63]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=193, Expect=1e-58]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=197, Expect=1e-60]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=212, Expect=1e-66]} {RNA1509_11145, RNA1509_1795, RNA1509_21046, RNA1509_45668} {RNA1310_18885, RNA1509_11145, RNA1509_1795, RNA1509_21046, RNA1509_45668} {RNA1509_11145, RNA1509_1795, RNA1509_21046, RNA1509_45668, RNA815_7394}