TomoSeq data search

Data search

Results for MligTC455_18248

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_18248	30	0.62	Mlig455_014123	Neo: - Age: -		Mlig455_014123 {REF} {Length: 286} {NoTransDecoderORF}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_18248

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	3.384	0.785	0.23097	0.87484
RegionR2	3.446	0.785	0.19453	0.55169
RegionR3	-0.438	0.785	0.79304	1.00000
RegionR4	-0.894	0.785	0.87248	1.00000
RegionR5	-2.575	0.785	0.99960	1.00000
RegionR6	-1.499	0.785	0.99685	1.00000
RegionR7	1.497	0.785	0.89625	1.00000
RegionR8	-2.92	0.785	0.37407	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.117	0.785	0.93486	1.00000
RegenerationR2	-2.353	0.785	0.35812	0.78791
RegenerationR3	-0.47	0.785	0.55866	0.88789
RegenerationR4	-0.899	0.785	0.54263	0.88957
RegenerationR5	0.199	0.785	0.64124	0.92747
RegenerationR6	0.912	0.785	0.86525	1.00000
RegenerationBL	0.98	0.785	0.99989	1.00000
RegenerationTP	-0.653	0.785	0.99992	1.00000

Genes with expression patterns similar to MligTC455_18248

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18248	30	0.62	Mlig455_014123	Neo: - Age: -		2	1.000	1.000	-	-	-	-	Mlig455_014123 {REF} {Length: 286} {NoTransDecoderORF}
2.	MligTC455_13927	79	1.65	Mlig455_025242, Mlig455_025623	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.383	KIF1B	0.964	-	0.964	-	-	-	-	Mlig455_025242 {REF} {Length: 3364} {Pfam: FHA domain [PF00498.28, score=31.2]; Kinesin protein 1B [PF12423.10, score=29.5]} {Human: ENSG00000054523, KIF1B, kinesin family member 1B, [Score=52.4, Expect=2e-06]; ENSG00000197892, KIF13B, kinesin family member 13B, [Score=51.6, Expect=4e-06]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [Score=160, Expect=5e-41]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=58.2, Expect=2e-08]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [Score=210, Expect=2e-58]} {Smed: dd_Smed_v6_20223_0_1, dd_Smed_v6_20223_0_1, [Score=348, Expect=3e-110]} {RNA1310_9866} {RNA815_27415} Mlig455_025623 {REF} {Length: 4205} {Pfam: Kinesin motor domain [PF00225.25, score=345.1]; Microtubule binding [PF16796.7, score=70.6]; FHA domain [PF00498.28, score=30.2]; Kinesin-associated [PF16183.7, score=29.6]; Kinesin protein 1B [PF12423.10, score=28.9]} {Human: ENSG00000054523, KIF1B, kinesin family member 1B, [Score=464, Expect=6e-145]; ENSG00000130294, KIF1A, kinesin family member 1A, [Score=450, Expect=1e-135]; ENSG00000129250, KIF1C, kinesin family member 1C, [Score=448, Expect=2e-139]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [RH, Score=598, Expect=0.0]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=441, Expect=6e-132]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [Score=703, Expect=0.0]} {Smed: dd_Smed_v6_12573_0_1, dd_Smed_v6_12573_0_1, [Score=806, Expect=0.0]} {RNA1509_18998} {RNA1310_9866} {RNA815_31497}
3.	MligTC455_53720	144	2.99	Mlig455_028516	Neo: - Age: - Region-enriched R2: 4.205/0.01762	CTBP2	0.952	-	0.952	-	-	-	-	Mlig455_028516 {REF} {Length: 3357} {TRANSSPLICED} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=112.7]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=67.2]; THAP domain [PF05485.14, score=38.8]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=22.2]} {Human: ENSG00000175029, CTBP2, C-terminal binding protein 2, [Score=370, Expect=3e-115]; ENSG00000159692, CTBP1, C-terminal binding protein 1, [Score=360, Expect=1e-117]} {Mouse: ENSMUSG00000030970, Ctbp2, C-terminal binding protein 2, [Score=372, Expect=5e-116]; ENSMUSG00000037373, Ctbp1, C-terminal binding protein 1, [Score=362, Expect=8e-119]} {Dmel: FBgn0020496, CtBP, C-terminal Binding Protein, [Score=354, Expect=1e-116]} {Celegans: WBGene00006424, ctbp-1, C-terminal-binding protein 1, [Score=475, Expect=8e-159]} {Smed: dd_Smed_v6_1063_0_1, dd_Smed_v6_1063_0_1, [Score=354, Expect=3e-115]} {RNA1310_37204} {RNA815_48484}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_18248

0.62

Mlig455_014123

Neo: -

Age: -

1.000

Mlig455_014123 {REF} {Length: 286} {NoTransDecoderORF}

MligTC455_13927

1.65

Mlig455_025242, Mlig455_025623

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.383

KIF1B

0.964

Mlig455_025242 {REF} {Length: 3364} {Pfam: FHA domain [PF00498.28, score=31.2]; Kinesin protein 1B [PF12423.10, score=29.5]} {Human: ENSG00000054523, KIF1B, kinesin family member 1B, [Score=52.4, Expect=2e-06]; ENSG00000197892, KIF13B, kinesin family member 13B, [Score=51.6, Expect=4e-06]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [Score=160, Expect=5e-41]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=58.2, Expect=2e-08]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [Score=210, Expect=2e-58]} {Smed: dd_Smed_v6_20223_0_1, dd_Smed_v6_20223_0_1, [Score=348, Expect=3e-110]} {RNA1310_9866} {RNA815_27415}

Mlig455_025623 {REF} {Length: 4205} {Pfam: Kinesin motor domain [PF00225.25, score=345.1]; Microtubule binding [PF16796.7, score=70.6]; FHA domain [PF00498.28, score=30.2]; Kinesin-associated [PF16183.7, score=29.6]; Kinesin protein 1B [PF12423.10, score=28.9]} {Human: ENSG00000054523, KIF1B, kinesin family member 1B, [Score=464, Expect=6e-145]; ENSG00000130294, KIF1A, kinesin family member 1A, [Score=450, Expect=1e-135]; ENSG00000129250, KIF1C, kinesin family member 1C, [Score=448, Expect=2e-139]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [RH, Score=598, Expect=0.0]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=441, Expect=6e-132]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [Score=703, Expect=0.0]} {Smed: dd_Smed_v6_12573_0_1, dd_Smed_v6_12573_0_1, [Score=806, Expect=0.0]} {RNA1509_18998} {RNA1310_9866} {RNA815_31497}

MligTC455_53720

144

2.99

Mlig455_028516

Neo: -

Age: -

Region-enriched R2: 4.205/0.01762

CTBP2

0.952

Mlig455_028516 {REF} {Length: 3357} {TRANSSPLICED} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=112.7]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=67.2]; THAP domain [PF05485.14, score=38.8]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=22.2]} {Human: ENSG00000175029, CTBP2, C-terminal binding protein 2, [Score=370, Expect=3e-115]; ENSG00000159692, CTBP1, C-terminal binding protein 1, [Score=360, Expect=1e-117]} {Mouse: ENSMUSG00000030970, Ctbp2, C-terminal binding protein 2, [Score=372, Expect=5e-116]; ENSMUSG00000037373, Ctbp1, C-terminal binding protein 1, [Score=362, Expect=8e-119]} {Dmel: FBgn0020496, CtBP, C-terminal Binding Protein, [Score=354, Expect=1e-116]} {Celegans: WBGene00006424, ctbp-1, C-terminal-binding protein 1, [Score=475, Expect=8e-159]} {Smed: dd_Smed_v6_1063_0_1, dd_Smed_v6_1063_0_1, [Score=354, Expect=3e-115]} {RNA1310_37204} {RNA815_48484}