M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_18254

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18254 2125 44.28 Mlig455_001530, Mlig455_046572

Neo: -

Age: -

Region-enriched R5: 1.366/0.00000

 NT5C2

Mlig455_001530 {REF} {Length: 4193} {TRANSSPLICED} {Pfam: 5' nucleotidase family [PF05761.16, score=504.9]; Haloacid dehalogenase-like hydrolase [PF13419.8, score=18.8]} {Human: ENSG00000076685, NT5C2, 5'-nucleotidase, cytosolic II, [RH, Score=472, Expect=7e-161]} {Mouse: ENSMUSG00000025041, Nt5c2, 5'-nucleotidase, cytosolic II, [RH, Score=471, Expect=6e-161]} {Dmel: FBgn0052549, CG32549, [RH, Score=490, Expect=3e-167]} {Celegans: WBGene00022201, Y71H10B.1, [RH, Score=462, Expect=2e-157]} {Smed: dd_Smed_v6_8710_0_1, dd_Smed_v6_8710_0_1, [RH, Score=473, Expect=4e-162]} {RNA1509_3526} {RNA1310_10012, RNA1509_3526} {RNA1509_3526, RNA815_3134}

Mlig455_046572 {REF} {Length: 3987} {TRANSSPLICED} {Pfam: 5' nucleotidase family [PF05761.16, score=503.5]; Haloacid dehalogenase-like hydrolase [PF13419.8, score=18.7]} {Human: ENSG00000076685, NT5C2, 5'-nucleotidase, cytosolic II, [RH, Score=472, Expect=8e-161]} {Mouse: ENSMUSG00000025041, Nt5c2, 5'-nucleotidase, cytosolic II, [RH, Score=471, Expect=7e-161]} {Dmel: FBgn0052549, CG32549, [RH, Score=490, Expect=3e-167]} {Celegans: WBGene00022201, Y71H10B.1, [RH, Score=462, Expect=1e-157]} {Smed: dd_Smed_v6_8710_0_1, dd_Smed_v6_8710_0_1, [RH, Score=472, Expect=8e-162]} {RNA1509_16347, RNA1509_17748, RNA1509_29372, RNA1509_3526, RNA1509_55319} {RNA1310_10012, RNA1509_16347, RNA1509_17748, RNA1509_29372, RNA1509_55319} {RNA1509_16347, RNA1509_17748, RNA1509_29372, RNA1509_55319, RNA815_3134}

Cumulative graph for MligTC455_18254

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.002 5.662 0.99928 1.00000
RegionR2 -0.38 5.662 0.27181 0.65635
RegionR3 0.635 5.662 0.01729 0.21626
RegionR4 0.899 5.662 0.00298 0.02435
RegionR5 1.366 5.662 0.00000 0.00000
RegionR6 0.488 5.662 0.07189 0.49898
RegionR7 -1.104 5.662 0.00724 0.14071
RegionR8 -1.903 5.662 0.00093 0.04407

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.529 5.662 0.50954 1.00000
RegenerationR2 0.257 5.662 0.38467 0.80474
RegenerationR3 0.564 5.662 0.05312 0.39763
RegenerationR4 0.194 5.662 0.51625 0.87822
RegenerationR5 0.065 5.662 0.81259 0.99237
RegenerationR6 0.228 5.662 0.45478 0.77398
RegenerationBL 0.713 5.662 0.07413 0.31789
RegenerationTP 1.261 5.662 0.00686 0.13953


Genes with expression patterns similar to MligTC455_18254

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18254 2125 44.28 Mlig455_001530, Mlig455_046572

Neo: -

Age: -

Region-enriched R5: 1.366/0.00000

 NT5C2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_001530 {REF} {Length: 4193} {TRANSSPLICED} {Pfam: 5' nucleotidase family [PF05761.16, score=504.9]; Haloacid dehalogenase-like hydrolase [PF13419.8, score=18.8]} {Human: ENSG00000076685, NT5C2, 5'-nucleotidase, cytosolic II, [RH, Score=472, Expect=7e-161]} {Mouse: ENSMUSG00000025041, Nt5c2, 5'-nucleotidase, cytosolic II, [RH, Score=471, Expect=6e-161]} {Dmel: FBgn0052549, CG32549, [RH, Score=490, Expect=3e-167]} {Celegans: WBGene00022201, Y71H10B.1, [RH, Score=462, Expect=2e-157]} {Smed: dd_Smed_v6_8710_0_1, dd_Smed_v6_8710_0_1, [RH, Score=473, Expect=4e-162]} {RNA1509_3526} {RNA1310_10012, RNA1509_3526} {RNA1509_3526, RNA815_3134}

Mlig455_046572 {REF} {Length: 3987} {TRANSSPLICED} {Pfam: 5' nucleotidase family [PF05761.16, score=503.5]; Haloacid dehalogenase-like hydrolase [PF13419.8, score=18.7]} {Human: ENSG00000076685, NT5C2, 5'-nucleotidase, cytosolic II, [RH, Score=472, Expect=8e-161]} {Mouse: ENSMUSG00000025041, Nt5c2, 5'-nucleotidase, cytosolic II, [RH, Score=471, Expect=7e-161]} {Dmel: FBgn0052549, CG32549, [RH, Score=490, Expect=3e-167]} {Celegans: WBGene00022201, Y71H10B.1, [RH, Score=462, Expect=1e-157]} {Smed: dd_Smed_v6_8710_0_1, dd_Smed_v6_8710_0_1, [RH, Score=472, Expect=8e-162]} {RNA1509_16347, RNA1509_17748, RNA1509_29372, RNA1509_3526, RNA1509_55319} {RNA1310_10012, RNA1509_16347, RNA1509_17748, RNA1509_29372, RNA1509_55319} {RNA1509_16347, RNA1509_17748, RNA1509_29372, RNA1509_55319, RNA815_3134}
2. MligTC455_28574 1043 21.73 Mlig455_050583

Neo: -

Age: logFC(26M/2M)=1.226

Region-enriched R4: 1.559/0.00651
Region-enriched R3: 1.236/0.00906

 BCHE 2.484 - - - 0.777 0.954 0.753 Mlig455_050583 {REF} {Length: 5272} {Pfam: Carboxylesterase family [PF00135.30, score=445.2]; alpha/beta hydrolase fold [PF07859.15, score=30.0]} {Human: ENSG00000114200, BCHE, butyrylcholinesterase, [Score=189, Expect=2e-50]; ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=181, Expect=3e-47]} {Mouse: ENSMUSG00000027792, Bche, butyrylcholinesterase, [Score=186, Expect=3e-49]} {Dmel: FBgn0015574, alpha-Est6, alpha-Esterase-6, [RH, Score=152, Expect=3e-38]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=162, Expect=3e-41]} {Smed: dd_Smed_v6_4935_0_1, dd_Smed_v6_4935_0_1, [Score=152, Expect=1e-37]} {RNA1509_43749} {RNA1310_5793.1} {RNA815_10667.1}
3. MligTC455_48966 1196 24.92 Mlig455_011970

Neo: -

Age: logFC(26M/2M)=0.730

Region-enriched R4: 2.185/0.00002
Region-enriched R5: 1.169/0.00499

 1.788 - - - 0.958 - 0.830 Mlig455_011970 {REF} {Length: 667} {TRANSSPLICED} {Pfam: Type III secretion system lipoprotein chaperone (YscW) [PF09619.12, score=24.6]} {RNA1509_11772} {RNA1310_19739.1} {RNA815_20380}
4. MligTC455_37016 2907 60.56 Mlig455_024229

Neo: -

Age: Down-Up-Down

Region-enriched R3: 2.174/0.00004

 0.958 - - - - 0.958 - Mlig455_024229 {REF} {Length: 1688} {RNA1509_25840, RNA1509_36713, RNA1509_3844, RNA1509_6102} {RNA1310_12542.1, RNA1509_25840, RNA1509_36713, RNA1509_3844, RNA1509_6102} {RNA1509_25840, RNA1509_36713, RNA1509_3844, RNA1509_6102, RNA815_670}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA