Data search
Results for MligTC455_18287
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18287 | 456 | 9.51 | Mlig455_016328 | Neo: Int S/G2/M Age: Up-Up-Down |
Mlig455_016328 {REF} {Length: 3739} {Pfam: SPT2 chromatin protein [PF08243.13, score=47.0]} {Smed: dd_Smed_v6_9902_0_1, dd_Smed_v6_9902_0_1, [RH, Score=68.9, Expect=3e-14]} {RNA1509_17926, RNA1509_29184, RNA1509_43349, RNA1509_44249, RNA1509_56106} {RNA1310_18115, RNA1509_17926, RNA1509_29184, RNA1509_43349, RNA1509_44249, RNA1509_56106} {RNA1509_17926, RNA1509_29184, RNA1509_43349, RNA1509_44249, RNA1509_56106, RNA815_7016} |
Cumulative graph for MligTC455_18287
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.702 | 3.67 | 0.49204 | 1.00000 | |
| RegionR2 | 0.295 | 3.67 | 0.56528 | 0.92651 | |
| RegionR3 | 0.139 | 3.67 | 0.72861 | 1.00000 | |
| RegionR4 | 0.664 | 3.67 | 0.13469 | 0.37293 | |
| RegionR5 | 0.858 | 3.67 | 0.01151 | 0.06400 | |
| RegionR6 | -0.058 | 3.67 | 0.90320 | 1.00000 | |
| RegionR7 | 0.148 | 3.67 | 0.78418 | 1.00000 | |
| RegionR8 | -2.747 | 3.67 | 0.00827 | 0.16908 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.924 | 3.67 | 0.08321 | 0.78241 | |
| RegenerationR2 | 0.16 | 3.67 | 0.68353 | 0.95001 | |
| RegenerationR3 | 0.72 | 3.67 | 0.08326 | 0.47188 | |
| RegenerationR4 | -0.344 | 3.67 | 0.42189 | 0.82644 | |
| RegenerationR5 | 0.336 | 3.67 | 0.34138 | 0.75850 | |
| RegenerationR6 | 0.328 | 3.67 | 0.48348 | 0.79403 | |
| RegenerationBL | 1.581 | 3.67 | 0.01343 | 0.11978 | |
| RegenerationTP | -0.092 | 3.67 | 0.93232 | 1.00000 |
Genes with expression patterns similar to MligTC455_18287
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18287 | 456 | 9.51 | Mlig455_016328 | Neo: Int S/G2/M Age: Up-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_016328 {REF} {Length: 3739} {Pfam: SPT2 chromatin protein [PF08243.13, score=47.0]} {Smed: dd_Smed_v6_9902_0_1, dd_Smed_v6_9902_0_1, [RH, Score=68.9, Expect=3e-14]} {RNA1509_17926, RNA1509_29184, RNA1509_43349, RNA1509_44249, RNA1509_56106} {RNA1310_18115, RNA1509_17926, RNA1509_29184, RNA1509_43349, RNA1509_44249, RNA1509_56106} {RNA1509_17926, RNA1509_29184, RNA1509_43349, RNA1509_44249, RNA1509_56106, RNA815_7016} | |
| 2. | MligTC455_22043 | 636 | 13.25 | Mlig455_026304 | Neo: - Age: - Region-enriched R5: 1.012/0.01851 |
1.72 | - | - | 0.739 | 0.981 | - | - | Mlig455_026304 {REF} {Length: 735} {NoTransDecoderORF} {RNA1509_42992, RNA1509_8574} {RNA1310_17894, RNA1509_42992} {RNA1509_42992, RNA815_9024} | |
| 3. | MligTC455_22044 | 745 | 15.52 | Mlig455_026320 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.414 Region-enriched R4: 1.232/0.02570 |
ARL2BP | 1.717 | - | - | 0.739 | 0.978 | - | - | Mlig455_026320 {REF} {Length: 2260} {Pfam: The ARF-like 2 binding protein BART [PF11527.10, score=93.7]} {Human: ENSG00000102931, ARL2BP, ADP ribosylation factor like GTPase 2 binding protein, [RH, Score=118, Expect=2e-33]} {Mouse: ENSMUSG00000031776, Arl2bp, ADP-ribosylation factor-like 2 binding protein, [RH, Score=119, Expect=7e-34]} {Smed: dd_Smed_v6_6975_0_1, dd_Smed_v6_6975_0_1, [RH, Score=147, Expect=1e-44]} {RNA1509_8574} {RNA1310_26001, RNA1509_8574} {RNA1509_8574, RNA815_10256.1} |
| 4. | MligTC455_19117 | 247 | 5.14 | Mlig455_065433 | Neo: - Age: - |
PPARG | 0.954 | - | - | - | 0.954 | - | - | Mlig455_065433 {REF} {Length: 4850} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=75.6]} {Human: ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=86.7, Expect=4e-17]; ENSG00000077092, RARB, retinoic acid receptor beta, [Score=84.7, Expect=1e-16]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=84.0, Expect=4e-16]; ENSG00000069667, RORA, RAR related orphan receptor A, [Score=84.0, Expect=3e-16]; ENSG00000186951, PPARA, peroxisome proliferator activated receptor alpha, [Score=83.6, Expect=3e-16]; ENSG00000112033, PPARD, peroxisome proliferator activated receptor delta, [Score=82.4, Expect=5e-16]} {Mouse: ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=86.7, Expect=3e-17]; ENSMUSG00000017491, Rarb, retinoic acid receptor, beta, [Score=84.0, Expect=2e-16]; ENSMUSG00000022383, Ppara, peroxisome proliferator activated receptor alpha, [Score=83.6, Expect=2e-16]; ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [Score=83.6, Expect=4e-16]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=82.4, Expect=7e-16]} {Dmel: FBgn0000568, Eip75B, Ecdysone-induced protein 75B, [Score=87.0, Expect=4e-17]} {Celegans: WBGene00003675, nhr-85, Nuclear hormone receptor family member nhr-85, [Score=95.1, Expect=3e-20]} {Smed: dd_Smed_v6_9282_0_2, dd_Smed_v6_9282_0_2, [Score=89.7, Expect=2e-18]} {RNA1509_38740} {RNA1310_7654.1} {RNA815_7540} |
Berezikov Lab - 2020-2021 © ERIBA