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Results for MligTC455_18346

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18346 514 10.70 Mlig455_037669, Mlig455_037771

Neo: Int S/G2/M

Age: -

GTF2H3

Mlig455_037669 {REF} {Length: 2152} {Pfam: Transcription factor Tfb4 [PF03850.16, score=237.2]} {Human: ENSG00000111358, GTF2H3, general transcription factor IIH subunit 3, [RH, Score=224, Expect=1e-71]} {Mouse: ENSMUSG00000029387, Gtf2h3, general transcription factor IIH, polypeptide 3, [RH, Score=219, Expect=9e-70]} {Dmel: FBgn0031309, Tfb4, Transcription factor B4, [RH, Score=197, Expect=2e-61]} {Celegans: WBGene00014230, ZK1128.4, [RH, Score=100, Expect=1e-24]} {Smed: dd_Smed_v6_4560_0_1, dd_Smed_v6_4560_0_1, [RH, Score=153, Expect=3e-44]} {RNA1509_8797} {RNA1310_24307.1} {RNA815_12877}

Mlig455_037771 {REF} {Length: 2350} {TRANSSPLICED} {Pfam: Transcription factor Tfb4 [PF03850.16, score=237.2]} {Human: ENSG00000111358, GTF2H3, general transcription factor IIH subunit 3, [RH, Score=224, Expect=1e-71]} {Mouse: ENSMUSG00000029387, Gtf2h3, general transcription factor IIH, polypeptide 3, [RH, Score=219, Expect=9e-70]} {Dmel: FBgn0031309, Tfb4, Transcription factor B4, [RH, Score=197, Expect=2e-61]} {Celegans: WBGene00014230, ZK1128.4, [RH, Score=100, Expect=1e-24]} {Smed: dd_Smed_v6_4560_0_1, dd_Smed_v6_4560_0_1, [RH, Score=153, Expect=3e-44]} {RNA1509_43494, RNA1509_45957, RNA1509_8797} {RNA1310_24307.1, RNA1509_43494, RNA1509_45957, RNA1509_8797} {RNA1509_43494, RNA1509_45957, RNA1509_8797, RNA815_12877}

Cumulative graph for MligTC455_18346

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.645 3.897 0.28956 0.94131
RegionR2 0.484 3.897 0.46568 0.85186
RegionR3 0.678 3.897 0.17152 0.69726
RegionR4 0.838 3.897 0.14620 0.39304
RegionR5 0.916 3.897 0.04258 0.16678
RegionR6 0.372 3.897 0.49034 1.00000
RegionR7 -0.521 3.897 0.43568 1.00000
RegionR8 -1.122 3.897 0.21035 0.81351

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.684 3.897 0.41798 1.00000
RegenerationR2 -0.152 3.897 0.77207 0.98097
RegenerationR3 0.236 3.897 0.68383 0.94143
RegenerationR4 -0.601 3.897 0.29684 0.73917
RegenerationR5 -0.345 3.897 0.50756 0.86233
RegenerationR6 0.905 3.897 0.10260 0.39668
RegenerationBL -1.908 3.897 0.07901 0.32834
RegenerationTP 0.65 3.897 0.42552 0.84887


Genes with expression patterns similar to MligTC455_18346

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18346 514 10.7 Mlig455_037669, Mlig455_037771

Neo: Int S/G2/M

Age: -

GTF2H3 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_037669 {REF} {Length: 2152} {Pfam: Transcription factor Tfb4 [PF03850.16, score=237.2]} {Human: ENSG00000111358, GTF2H3, general transcription factor IIH subunit 3, [RH, Score=224, Expect=1e-71]} {Mouse: ENSMUSG00000029387, Gtf2h3, general transcription factor IIH, polypeptide 3, [RH, Score=219, Expect=9e-70]} {Dmel: FBgn0031309, Tfb4, Transcription factor B4, [RH, Score=197, Expect=2e-61]} {Celegans: WBGene00014230, ZK1128.4, [RH, Score=100, Expect=1e-24]} {Smed: dd_Smed_v6_4560_0_1, dd_Smed_v6_4560_0_1, [RH, Score=153, Expect=3e-44]} {RNA1509_8797} {RNA1310_24307.1} {RNA815_12877}

Mlig455_037771 {REF} {Length: 2350} {TRANSSPLICED} {Pfam: Transcription factor Tfb4 [PF03850.16, score=237.2]} {Human: ENSG00000111358, GTF2H3, general transcription factor IIH subunit 3, [RH, Score=224, Expect=1e-71]} {Mouse: ENSMUSG00000029387, Gtf2h3, general transcription factor IIH, polypeptide 3, [RH, Score=219, Expect=9e-70]} {Dmel: FBgn0031309, Tfb4, Transcription factor B4, [RH, Score=197, Expect=2e-61]} {Celegans: WBGene00014230, ZK1128.4, [RH, Score=100, Expect=1e-24]} {Smed: dd_Smed_v6_4560_0_1, dd_Smed_v6_4560_0_1, [RH, Score=153, Expect=3e-44]} {RNA1509_43494, RNA1509_45957, RNA1509_8797} {RNA1310_24307.1, RNA1509_43494, RNA1509_45957, RNA1509_8797} {RNA1509_43494, RNA1509_45957, RNA1509_8797, RNA815_12877}
2. MligTC455_19686 199 4.15 Mlig455_037617

Neo: Int S/G2/M

Age: Down-Up-Down

CCNQ 1.776 0.817 - - - - 0.959 Mlig455_037617 {REF} {Length: 2073} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=29.6]} {Human: ENSG00000262919, CCNQ, cyclin Q, [RH, Score=126, Expect=1e-35]} {Mouse: ENSMUSG00000049489, Ccnq, cyclin Q, [RH, Score=126, Expect=2e-35]} {Dmel: FBgn0040394, CG16903, [Score=65.5, Expect=3e-12]} {Smed: dd_Smed_v6_9138_0_3, dd_Smed_v6_9138_0_3, [RH, Score=106, Expect=2e-28]} {RNA1509_34677} {RNA1310_40105.1} {RNA815_11835}
3. MligTC455_42707 490 10.2 Mlig455_062703

Neo: -

Age: Up-Up-Down

0.957 - - - - - 0.957 Mlig455_062703 {REF} {Length: 1072} {RNA1509_18300} {RNA1310_42056} {RNA815_25547}
4. MligTC455_35704 317 6.6 Mlig455_043180

Neo: -

Age: logFC(26M/2M)=0.333

ECHDC3 0.956 - - - - - 0.956 Mlig455_043180 {REF} {Length: 2665} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=177.1]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=108.7]} {Human: ENSG00000134463, ECHDC3, enoyl-CoA hydratase domain containing 3, [RH, Score=262, Expect=4e-86]} {Mouse: ENSMUSG00000039063, Echdc3, enoyl Coenzyme A hydratase domain containing 3, [RH, Score=253, Expect=9e-83]} {Dmel: FBgn0034191, CG6984, [RH, Score=210, Expect=3e-66]} {Celegans: WBGene00001151, ech-2, Enoyl-CoA Hydratase, [RH, Score=204, Expect=7e-64]} {Smed: dd_Smed_v6_4330_0_1, dd_Smed_v6_4330_0_1, [RH, Score=237, Expect=6e-77]} {RNA1509_28384} {RNA1310_28620} {RNA815_15187}
5. MligTC455_36496 283 5.89 Mlig455_018138

Neo: -

Age: Down-Up-Up

TAF5 0.956 - - - - - 0.956 Mlig455_018138 {REF} {Length: 2151} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=126.9]; WD40 associated region in TFIID subunit, NTD2 domain [PF04494.17, score=93.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=44.8]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=18.3]} {Human: ENSG00000148835, TAF5, TATA-box binding protein associated factor 5, [RH, Score=424, Expect=8e-138]} {Mouse: ENSMUSG00000025049, Taf5, TATA-box binding protein associated factor 5, [RH, Score=423, Expect=1e-137]} {Dmel: FBgn0010356, Taf5, TBP-associated factor 5, [RH, Score=378, Expect=1e-121]} {Celegans: WBGene00006386, taf-5, TAF (TBP-associated transcription factor) family, [RH, Score=254, Expect=2e-75]} {Smed: dd_Smed_v6_7319_0_1, dd_Smed_v6_7319_0_1, [Score=310, Expect=8e-96]} {RNA1509_15120} {RNA1310_12001} {RNA815_9687}
6. MligTC455_39984 512 10.67 Mlig455_039849

Neo: -

Age: -

0.952 - - - - - 0.952 Mlig455_039849 {REF} {Length: 887} {RNA1509_47643} {RNA1310_53943, RNA1509_47643} {RNA1509_47643, RNA815_31128}

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