TomoSeq data search

Data search

Results for MligTC455_18368

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_18368	362	7.55	Mlig455_014606	Neo: Int S/G2/M Age: -	DROSHA	Mlig455_014606 {REF} {Length: 7104} {TRANSSPLICED} {Pfam: Ribonuclease III domain [PF00636.28, score=123.1]; Ribonuclease-III-like [PF14622.8, score=100.2]; SAM domain (Sterile alpha motif) [PF00536.32, score=48.7]; Double-stranded RNA binding motif [PF00035.28, score=44.7]; SAM domain (Sterile alpha motif) [PF07647.19, score=31.6]} {Human: ENSG00000113360, DROSHA, drosha ribonuclease III, [RH, Score=694, Expect=0.0]} {Mouse: ENSMUSG00000022191, Drosha, drosha, ribonuclease type III, [RH, Score=693, Expect=0.0]} {Dmel: FBgn0026722, drosha, [RH, Score=689, Expect=0.0]} {Celegans: WBGene00009163, drsh-1, Ribonuclease 3, [RH, Score=448, Expect=7e-134]} {Smed: dd_Smed_v6_10414_0_1, dd_Smed_v6_10414_0_1, [RH, Score=491, Expect=5e-157]} {RNA1509_37623, RNA1509_58082, RNA1509_8163} {RNA1310_2415.1, RNA1509_37623, RNA1509_58082} {RNA1509_37623, RNA1509_58082, RNA815_720.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18368

362

7.55

Mlig455_014606

Neo: Int S/G2/M

Age: -

DROSHA

Mlig455_014606 {REF} {Length: 7104} {TRANSSPLICED} {Pfam: Ribonuclease III domain [PF00636.28, score=123.1]; Ribonuclease-III-like [PF14622.8, score=100.2]; SAM domain (Sterile alpha motif) [PF00536.32, score=48.7]; Double-stranded RNA binding motif [PF00035.28, score=44.7]; SAM domain (Sterile alpha motif) [PF07647.19, score=31.6]} {Human: ENSG00000113360, DROSHA, drosha ribonuclease III, [RH, Score=694, Expect=0.0]} {Mouse: ENSMUSG00000022191, Drosha, drosha, ribonuclease type III, [RH, Score=693, Expect=0.0]} {Dmel: FBgn0026722, drosha, [RH, Score=689, Expect=0.0]} {Celegans: WBGene00009163, drsh-1, Ribonuclease 3, [RH, Score=448, Expect=7e-134]} {Smed: dd_Smed_v6_10414_0_1, dd_Smed_v6_10414_0_1, [RH, Score=491, Expect=5e-157]} {RNA1509_37623, RNA1509_58082, RNA1509_8163} {RNA1310_2415.1, RNA1509_37623, RNA1509_58082} {RNA1509_37623, RNA1509_58082, RNA815_720.1}

Cumulative graph for MligTC455_18368

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.191	3.31	0.30326	0.95269
RegionR2	0.128	3.31	0.84029	1.00000
RegionR3	-0.349	3.31	0.49153	0.98995
RegionR4	-0.3	3.31	0.64076	0.94623
RegionR5	0.132	3.31	0.76983	1.00000
RegionR6	-0.968	3.31	0.06898	0.48989
RegionR7	0.416	3.31	0.49174	1.00000
RegionR8	-0.25	3.31	0.75644	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.179	3.31	0.18512	0.92596
RegenerationR2	0.067	3.31	0.90996	1.00000
RegenerationR3	0.129	3.31	0.83780	0.99325
RegenerationR4	0.121	3.31	0.84978	1.00000
RegenerationR5	0.191	3.31	0.73558	0.96625
RegenerationR6	0.998	3.31	0.14832	0.47190
RegenerationBL	0.589	3.31	0.46531	0.83194
RegenerationTP	0.013	3.31	0.98522	1.00000

Genes with expression patterns similar to MligTC455_18368

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18368	362	7.55	Mlig455_014606	Neo: Int S/G2/M Age: -	DROSHA	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_014606 {REF} {Length: 7104} {TRANSSPLICED} {Pfam: Ribonuclease III domain [PF00636.28, score=123.1]; Ribonuclease-III-like [PF14622.8, score=100.2]; SAM domain (Sterile alpha motif) [PF00536.32, score=48.7]; Double-stranded RNA binding motif [PF00035.28, score=44.7]; SAM domain (Sterile alpha motif) [PF07647.19, score=31.6]} {Human: ENSG00000113360, DROSHA, drosha ribonuclease III, [RH, Score=694, Expect=0.0]} {Mouse: ENSMUSG00000022191, Drosha, drosha, ribonuclease type III, [RH, Score=693, Expect=0.0]} {Dmel: FBgn0026722, drosha, [RH, Score=689, Expect=0.0]} {Celegans: WBGene00009163, drsh-1, Ribonuclease 3, [RH, Score=448, Expect=7e-134]} {Smed: dd_Smed_v6_10414_0_1, dd_Smed_v6_10414_0_1, [RH, Score=491, Expect=5e-157]} {RNA1509_37623, RNA1509_58082, RNA1509_8163} {RNA1310_2415.1, RNA1509_37623, RNA1509_58082} {RNA1509_37623, RNA1509_58082, RNA815_720.1}
2.	MligTC455_40974	1363	28.4	Mlig455_019489	Neo: Int S/G2/M Age: logFC(26M/2M)=0.723 Regeneration-enriched BL: 1.836 Regeneration-enriched R6: 1.509	HNRNPA2B1	1.783	-	-	-	0.833	-	0.950	Mlig455_019489 {REF} {Length: 2430} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=122.9]; RNA recognition motif [PF16367.7, score=43.7]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=202, Expect=7e-62]; ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=192, Expect=8e-59]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=202, Expect=1e-62]} {Dmel: FBgn0004903, Rb97D, Ribonuclear protein at 97D, [Score=196, Expect=1e-58]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=199, Expect=4e-61]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=243, Expect=3e-79]} {RNA1509_21450, RNA1509_23782, RNA1509_41048} {RNA1310_6454, RNA1509_23782, RNA1509_41048} {RNA1509_23782, RNA1509_41048, RNA815_8384.1}
3.	MligTC455_51906	162	3.38	Mlig455_014236	Neo: - Age: -	SYAP1	1.651	-	-	0.700	-	-	0.951	Mlig455_014236 {REF} {Length: 1942} {TRANSSPLICED} {Pfam: BSD domain [PF03909.19, score=47.8]} {Human: ENSG00000169895, SYAP1, synapse associated protein 1, [RH, Score=108, Expect=2e-27]} {Mouse: ENSMUSG00000031357, Syap1, synapse associated protein 1, [RH, Score=110, Expect=4e-28]} {Dmel: FBgn0013334, Sap47, Synapse-associated protein 47kD, [Score=105, Expect=2e-26]} {Celegans: WBGene00007621, C16C2.4, [Score=82.8, Expect=3e-18]} {Smed: dd_Smed_v6_1295_0_1, dd_Smed_v6_1295_0_1, [RH, Score=90.5, Expect=4e-21]} {RNA1509_31173, RNA1509_39381} {RNA1310_21856, RNA1509_39381} {RNA1509_39381, RNA815_15095}
4.	MligTC455_30422	232	4.83	Mlig455_065090	Neo: - Age: Down-Up-Up		0.963	-	-	-	-	0.963	-	Mlig455_065090 {REF} {Length: 1254} {RNA1509_42925} {RNA1310_34216} {RNA815_4396.1}