TomoSeq data search

Data search

Results for MligTC455_18424

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18424

204

4.26

Mlig455_014569

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.597

Mlig455_014569 {REF} {Length: 1555} {RNA1509_48577} {RNA1310_20631.1} {RNA815_8350}

Cumulative graph for MligTC455_18424

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.051	2.524	0.97188	1.00000
RegionR2	0.507	2.524	0.47666	0.86150
RegionR3	-0.768	2.524	0.21646	0.75807
RegionR4	-0.603	2.524	0.34036	0.66027
RegionR5	-0.354	2.524	0.50936	0.87225
RegionR6	0.104	2.524	0.86370	1.00000
RegionR7	0.446	2.524	0.53763	1.00000
RegionR8	0.616	2.524	0.47773	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.919	2.524	0.22629	0.95728
RegenerationR2	0.726	2.524	0.23099	0.67840
RegenerationR3	0.925	2.524	0.20374	0.63877
RegenerationR4	-0.132	2.524	0.84711	1.00000
RegenerationR5	0.932	2.524	0.14279	0.55730
RegenerationR6	-0.566	2.524	0.46032	0.77799
RegenerationBL	-0.636	2.524	0.48345	0.84882
RegenerationTP	-0.014	2.524	0.98804	1.00000

Genes with expression patterns similar to MligTC455_18424

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18424	204	4.26	Mlig455_014569	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.597		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_014569 {REF} {Length: 1555} {RNA1509_48577} {RNA1310_20631.1} {RNA815_8350}
2.	MligTC455_46594	591	12.31	Mlig455_037738	Neo: - Age: Up-Down-Up Region-enriched R2: 3.869/0.00006 Region-enriched R6: 2.537/0.01534		0.966	-	-	-	-	0.966	-	Mlig455_037738 {REF} {Length: 2043} {RNA1509_42203} {RNA1310_65422.3, RNA1509_42203} {RNA1509_42203, RNA815_30338}
3.	MligTC455_29766	175	3.64	Mlig455_037897	Neo: - Age: -	MAP3K19	0.962	-	-	0.962	-	-	-	Mlig455_037897 {REF} {Length: 3898} {Pfam: Protein kinase domain [PF00069.27, score=188.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=135.1]; Ankyrin repeats (many copies) [PF13637.8, score=127.4]; Ankyrin repeats (3 copies) [PF12796.9, score=106.1]; Ankyrin repeats (many copies) [PF13857.8, score=78.4]; Ankyrin repeat [PF13606.8, score=47.9]; Ankyrin repeat [PF00023.32, score=33.5]; Fungal protein kinase [PF17667.3, score=25.1]; ABC1 atypical kinase-like domain [PF03109.18, score=23.4]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=159, Expect=6e-41]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=158, Expect=9e-41]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=142, Expect=7e-35]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=131, Expect=1e-31]} {Smed: dd_Smed_v6_2030_0_16, dd_Smed_v6_2030_0_16, [Score=140, Expect=1e-35]} {RNA1509_45037} {RNA1310_17852.1} {RNA815_5323.2}
4.	MligTC455_08944	160	3.34	Mlig455_050947	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.619		0.953	-	-	0.953	-	-	-	Mlig455_050947 {REF} {Length: 1135} {RNA1310_13460.1} {RNA815_53760}
5.	MligTC455_24574	152	3.17	Mlig455_052673	Neo: - Age: Up-Down-Down	ZNFX1	0.95	-	-	-	0.950	-	-	Mlig455_052673 {REF} {Length: 7045} {Pfam: AAA domain [PF13087.8, score=127.0]; AAA domain [PF13086.8, score=90.4]; AAA domain [PF13245.8, score=33.6]; AAA domain [PF13604.8, score=27.0]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [RH, Score=677, Expect=0.0]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [RH, Score=772, Expect=0.0]} {Dmel: FBgn0039165, CG6204, [RH, Score=187, Expect=1e-47]} {Celegans: WBGene00014208, ZK1067.2, [RH, Score=373, Expect=3e-104]} {Smed: dd_Smed_v6_2581_0_1, dd_Smed_v6_2581_0_1, [RH, Score=1072, Expect=0.0]} {RNA1509_2240, RNA1509_27453} {RNA1310_697.1, RNA1509_27453} {RNA1509_27453, RNA815_202}

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